RNA–Protein interactions for RNA: ENST00000460389.5

HM13-206, Transcript of histocompatibility minor 13, humanhuman

TSL 5

Gene HM13, Length 1,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-206ENST00000460389 NISCHQ9Y2I1 1504 aa35.82■■■■□ 3.32
HM13-206ENST00000460389 ABCC9O60706 1549 aa33.23■■■□□ 2.91
HM13-206ENST00000460389 CCDC180Q9P1Z9 1646 aa32.43■■■□□ 2.78
HM13-206ENST00000460389 DNAJC5BQ9UF47 199 aa31.85■■■□□ 2.69
HM13-206ENST00000460389 RB1CC1Q8TDY2 1594 aa31.16■■■□□ 2.58
HM13-206ENST00000460389 PABPN1Q86U42 306 aaKnown RBP eCLIP30.81■■■□□ 2.52
HM13-206ENST00000460389 NACADO15069 1562 aa30.75■■■□□ 2.51
HM13-206ENST00000460389 UNC13AQ9UPW8 1703 aa30.73■■■□□ 2.51
HM13-206ENST00000460389 DCAF8L2P0C7V8 631 aa30.5■■■□□ 2.47
HM13-206ENST00000460389 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
HM13-206ENST00000460389 MYO15BQ96JP2 1530 aa30.02■■■□□ 2.4
HM13-206ENST00000460389 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
HM13-206ENST00000460389 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
HM13-206ENST00000460389 EIF4G1Q04637 1599 aaKnown RBP29.7■■■□□ 2.35
HM13-206ENST00000460389 SHROOM4Q9ULL8 1493 aa29.67■■■□□ 2.34
HM13-206ENST00000460389 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
HM13-206ENST00000460389 ZCCHC6Q5VYS8 1495 aaKnown RBP29.57■■■□□ 2.32
HM13-206ENST00000460389 DNAJC5Q9H3Z4 198 aa29.53■■■□□ 2.32
HM13-206ENST00000460389 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
HM13-206ENST00000460389 CUX2O14529 1486 aa28.74■■■□□ 2.19
HM13-206ENST00000460389 ERCC6Q03468 1493 aa28.6■■■□□ 2.17
HM13-206ENST00000460389 NESP48681 1621 aa28.41■■■□□ 2.14
HM13-206ENST00000460389 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
HM13-206ENST00000460389 ATAD2BQ9ULI0 1458 aa28.29■■■□□ 2.12
HM13-206ENST00000460389 THOC2Q8NI27 1593 aaKnown RBP28.23■■■□□ 2.11
HM13-206ENST00000460389 HMGXB3Q12766 1538 aa28.17■■■□□ 2.1
HM13-206ENST00000460389 SMARCA4P51532 1647 aa28.14■■■□□ 2.1
HM13-206ENST00000460389 SMARCA2P51531 1590 aa28.09■■■□□ 2.09
HM13-206ENST00000460389 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
HM13-206ENST00000460389 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
HM13-206ENST00000460389 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
HM13-206ENST00000460389 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
HM13-206ENST00000460389 PEG3Q9GZU2 1588 aa27.8■■■□□ 2.04
HM13-206ENST00000460389 BAZ1AQ9NRL2 1556 aaPredicted RBP27.79■■■□□ 2.04
HM13-206ENST00000460389 MROH2BQ7Z745 1585 aa27.7■■■□□ 2.03
HM13-206ENST00000460389 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
HM13-206ENST00000460389 MRC2Q9UBG0 1479 aa27.59■■■□□ 2.01
HM13-206ENST00000460389 WDR62O43379 1518 aa27.58■■■□□ 2.01
HM13-206ENST00000460389 CADPSQ9ULU8 1353 aa27.5■■□□□ 1.99
HM13-206ENST00000460389 WIZO95785 1651 aa27.38■■□□□ 1.97
HM13-206ENST00000460389 CEP164Q9UPV0 1460 aa27.33■■□□□ 1.97
HM13-206ENST00000460389 FANCD2Q9BXW9 1451 aa27.26■■□□□ 1.95
HM13-206ENST00000460389 OSCARQ8IYS5 282 aa27.25■■□□□ 1.95
HM13-206ENST00000460389 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
HM13-206ENST00000460389 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
HM13-206ENST00000460389 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
HM13-206ENST00000460389 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
HM13-206ENST00000460389 CFTRP13569 1480 aa27.08■■□□□ 1.93
HM13-206ENST00000460389 ARHGEF11O15085 1522 aa27■■□□□ 1.91
HM13-206ENST00000460389 ZNF608Q9ULD9 1512 aaPredicted RBP26.99■■□□□ 1.91
HM13-206ENST00000460389 PRDM2Q13029 1718 aa26.86■■□□□ 1.89
HM13-206ENST00000460389 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
HM13-206ENST00000460389 RSF1Q96T23 1441 aaPredicted RBP26.79■■□□□ 1.88
HM13-206ENST00000460389 EIF4G3O43432 1585 aaKnown RBP26.79■■□□□ 1.88
HM13-206ENST00000460389 IFT140Q96RY7 1462 aa26.77■■□□□ 1.88
HM13-206ENST00000460389 CYB5RLQ6IPT4 315 aa26.77■■□□□ 1.88
HM13-206ENST00000460389 CHD1O14646 1710 aa26.76■■□□□ 1.88
HM13-206ENST00000460389 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
HM13-206ENST00000460389 TOPBP1Q92547 1522 aa26.7■■□□□ 1.87
HM13-206ENST00000460389 TRHP20396 242 aaPredicted RBP26.66■■□□□ 1.86
HM13-206ENST00000460389 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.856e-8■■■■□ 25.7
HM13-206ENST00000460389 CCDC88BA6NC98 1476 aa26.57■■□□□ 1.84
HM13-206ENST00000460389 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
HM13-206ENST00000460389 DNMBPQ6XZF7 1577 aa26.52■■□□□ 1.84
HM13-206ENST00000460389 FBLN2P98095 1184 aa26.46■■□□□ 1.83
HM13-206ENST00000460389 POLA1P09884 1462 aaPredicted RBP26.39■■□□□ 1.82
HM13-206ENST00000460389 ABCC8Q09428 1581 aa26.37■■□□□ 1.81
HM13-206ENST00000460389 RAD54L2Q9Y4B4 1467 aa26.37■■□□□ 1.81
HM13-206ENST00000460389 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
HM13-206ENST00000460389 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
HM13-206ENST00000460389 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
HM13-206ENST00000460389 TDRD9Q8NDG6 1382 aaKnown RBP26.3■■□□□ 1.8
HM13-206ENST00000460389 SYNJ1O43426 1573 aa26.17■■□□□ 1.78
HM13-206ENST00000460389 SOGA1O94964 1423 aa26.17■■□□□ 1.78
HM13-206ENST00000460389 FGD5Q6ZNL6 1462 aa26.14■■□□□ 1.78
HM13-206ENST00000460389 MAGI1Q96QZ7 1491 aaPredicted RBP26.07■■□□□ 1.76
HM13-206ENST00000460389 CHMP7Q8WUX9 453 aaPredicted RBP26.07■■□□□ 1.76
HM13-206ENST00000460389 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
HM13-206ENST00000460389 GAPVD1Q14C86 1478 aa26.06■■□□□ 1.76
HM13-206ENST00000460389 CUX1P39880 1505 aa26.05■■□□□ 1.76
HM13-206ENST00000460389 ERCC6L2Q5T890 1561 aa26.04■■□□□ 1.76
HM13-206ENST00000460389 PBRM1Q86U86 1689 aa26.04■■□□□ 1.76
HM13-206ENST00000460389 SYNJ2O15056 1496 aa26.03■■□□□ 1.76
HM13-206ENST00000460389 GRIN2BQ13224 1484 aa26.02■■□□□ 1.76
HM13-206ENST00000460389 ABCA5Q8WWZ7 1642 aa25.85■■□□□ 1.73
HM13-206ENST00000460389 KIF13AQ9H1H9 1805 aa25.84■■□□□ 1.73
HM13-206ENST00000460389 CEP170Q5SW79 1584 aa25.79■■□□□ 1.72
HM13-206ENST00000460389 GRIN2AQ12879 1464 aa25.74■■□□□ 1.71
HM13-206ENST00000460389 ABCA10Q8WWZ4 1543 aa25.73■■□□□ 1.71
HM13-206ENST00000460389 ADAMTS12P58397 1594 aa25.71■■□□□ 1.71
HM13-206ENST00000460389 SHROOM2Q13796 1616 aa25.7■■□□□ 1.7
HM13-206ENST00000460389 NUP160Q12769 1436 aa25.67■■□□□ 1.7
HM13-206ENST00000460389 PRG4Q92954 1404 aaPredicted RBP25.47■■□□□ 1.67
HM13-206ENST00000460389 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
HM13-206ENST00000460389 KDM4FA0A1W2PPD8 638 aa25.46■■□□□ 1.67
HM13-206ENST00000460389 DIP2BQ9P265 1576 aa25.46■■□□□ 1.67
HM13-206ENST00000460389 ABCC10Q5T3U5 1492 aa25.44■■□□□ 1.66
HM13-206ENST00000460389 FAM69CQ0P6D2 419 aa25.42■■□□□ 1.66
HM13-206ENST00000460389 BIVM-ERCC5R4GMW8 1640 aa25.41■■□□□ 1.66
HM13-206ENST00000460389 WRNQ14191 1432 aaPredicted RBP eCLIP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms