RNA–Protein interactions for RNA: ENST00000398174.7

HM13-204, Transcript of histocompatibility minor 13, humanhuman

TSL 1 (best) BASIC

Gene HM13, Length 3,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-204ENST00000398174 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
HM13-204ENST00000398174 CCDC180Q9P1Z9 1646 aa20.21■□□□□ 0.83
HM13-204ENST00000398174 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
HM13-204ENST00000398174 DCAF1Q9Y4B6 1507 aa19.23■□□□□ 0.67
HM13-204ENST00000398174 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
HM13-204ENST00000398174 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.6
HM13-204ENST00000398174 HRCP23327 699 aa18.73■□□□□ 0.59
HM13-204ENST00000398174 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
HM13-204ENST00000398174 NACADO15069 1562 aa18.42■□□□□ 0.54
HM13-204ENST00000398174 PPARGC1BQ86YN6 1023 aaKnown RBP18.32■□□□□ 0.52
HM13-204ENST00000398174 ABCC9O60706 1549 aa18.3■□□□□ 0.52
HM13-204ENST00000398174 MYT1Q01538 1121 aa18.22■□□□□ 0.51
HM13-204ENST00000398174 SCRIBQ14160 1630 aa18.1■□□□□ 0.49
HM13-204ENST00000398174 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
HM13-204ENST00000398174 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
HM13-204ENST00000398174 BICRAQ9NZM4 1560 aa17.98■□□□□ 0.47
HM13-204ENST00000398174 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
HM13-204ENST00000398174 SHROOM4Q9ULL8 1493 aa17.94■□□□□ 0.46
HM13-204ENST00000398174 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
HM13-204ENST00000398174 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
HM13-204ENST00000398174 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
HM13-204ENST00000398174 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
HM13-204ENST00000398174 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
HM13-204ENST00000398174 SMARCA4P51532 1647 aa17.64■□□□□ 0.41
HM13-204ENST00000398174 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
HM13-204ENST00000398174 WIZO95785 1651 aa17.62■□□□□ 0.41
HM13-204ENST00000398174 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
HM13-204ENST00000398174 ACIN1Q9UKV3 1341 aaKnown RBP17.39■□□□□ 0.37
HM13-204ENST00000398174 NEUROD1Q13562 356 aa17.35■□□□□ 0.37
HM13-204ENST00000398174 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
HM13-204ENST00000398174 SMARCA2P51531 1590 aa17.34■□□□□ 0.37
HM13-204ENST00000398174 TTBK1Q5TCY1 1321 aaPredicted RBP17.33■□□□□ 0.36
HM13-204ENST00000398174 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
HM13-204ENST00000398174 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
HM13-204ENST00000398174 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.35
HM13-204ENST00000398174 TRIM26Q12899 539 aaPredicted RBP17.25■□□□□ 0.35
HM13-204ENST00000398174 GTF3C3Q9Y5Q9 886 aa17.25■□□□□ 0.35
HM13-204ENST00000398174 ZEB1P37275 1124 aaPredicted RBP17.24■□□□□ 0.35
HM13-204ENST00000398174 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
HM13-204ENST00000398174 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
HM13-204ENST00000398174 BCL11AQ9H165 835 aa17.11■□□□□ 0.33
HM13-204ENST00000398174 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
HM13-204ENST00000398174 ATAD2BQ9ULI0 1458 aa17.07■□□□□ 0.32
HM13-204ENST00000398174 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
HM13-204ENST00000398174 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
HM13-204ENST00000398174 CENPBP07199 599 aaPredicted RBP16.96■□□□□ 0.3
HM13-204ENST00000398174 NCAPD3P42695 1498 aa16.94■□□□□ 0.3
HM13-204ENST00000398174 PRKCSHP14314 528 aaPredicted RBP16.92■□□□□ 0.3
HM13-204ENST00000398174 BIVM-ERCC5R4GMW8 1640 aa16.89■□□□□ 0.29
HM13-204ENST00000398174 SYNJ1O43426 1573 aa16.79■□□□□ 0.28
HM13-204ENST00000398174 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
HM13-204ENST00000398174 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
HM13-204ENST00000398174 CC2D2AQ9P2K1 1620 aa16.76■□□□□ 0.27
HM13-204ENST00000398174 TOP2BQ02880 1626 aa16.73■□□□□ 0.27
HM13-204ENST00000398174 DIEXFQ68CQ4 756 aaKnown RBP16.72■□□□□ 0.27
HM13-204ENST00000398174 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
HM13-204ENST00000398174 ANP32EQ9BTT0 268 aa16.71■□□□□ 0.27
HM13-204ENST00000398174 CFTRP13569 1480 aa16.64■□□□□ 0.25
HM13-204ENST00000398174 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
HM13-204ENST00000398174 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
HM13-204ENST00000398174 KIF21BO75037 1637 aa16.55■□□□□ 0.24
HM13-204ENST00000398174 CUX1P39880 1505 aa16.53■□□□□ 0.24
HM13-204ENST00000398174 TRIM41Q8WV44 630 aa16.52■□□□□ 0.23
HM13-204ENST00000398174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
HM13-204ENST00000398174 YTHDC1Q96MU7 727 aaKnown RBP16.44■□□□□ 0.22
HM13-204ENST00000398174 TSHZ2Q9NRE2 1034 aa16.44■□□□□ 0.22
HM13-204ENST00000398174 RUSC2Q8N2Y8 1516 aa16.43■□□□□ 0.22
HM13-204ENST00000398174 WRNQ14191 1432 aaPredicted RBP eCLIP16.41■□□□□ 0.22
HM13-204ENST00000398174 APLP2Q06481 763 aa16.39■□□□□ 0.21
HM13-204ENST00000398174 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
HM13-204ENST00000398174 SOGA1O94964 1423 aa16.37■□□□□ 0.21
HM13-204ENST00000398174 ERICH6Q7L0X2 663 aa16.36■□□□□ 0.21
HM13-204ENST00000398174 EEA1Q15075 1411 aa16.36■□□□□ 0.21
HM13-204ENST00000398174 CCER1Q8TC90 406 aaPredicted RBP16.35■□□□□ 0.21
HM13-204ENST00000398174 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
HM13-204ENST00000398174 SUPT16HQ9Y5B9 1047 aaKnown RBP16.32■□□□□ 0.2
HM13-204ENST00000398174 ERICH3Q5RHP9 1530 aa16.31■□□□□ 0.2
HM13-204ENST00000398174 MIER1Q8N108 512 aa16.3■□□□□ 0.2
HM13-204ENST00000398174 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
HM13-204ENST00000398174 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
HM13-204ENST00000398174 PRXQ9BXM0 1461 aa16.26■□□□□ 0.19
HM13-204ENST00000398174 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
HM13-204ENST00000398174 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
HM13-204ENST00000398174 TARBP1Q13395 1621 aaKnown RBP16.22■□□□□ 0.19
HM13-204ENST00000398174 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
HM13-204ENST00000398174 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
HM13-204ENST00000398174 URB2Q14146 1524 aaKnown RBP16.15■□□□□ 0.18
HM13-204ENST00000398174 NESP48681 1621 aa16.14■□□□□ 0.17
HM13-204ENST00000398174 TNIKQ9UKE5 1360 aa16.13■□□□□ 0.17
HM13-204ENST00000398174 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
HM13-204ENST00000398174 TOPBP1Q92547 1522 aa16.12■□□□□ 0.17
HM13-204ENST00000398174 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
HM13-204ENST00000398174 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
HM13-204ENST00000398174 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
HM13-204ENST00000398174 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
HM13-204ENST00000398174 CTTNBP2Q8WZ74 1663 aa16.09■□□□□ 0.17
HM13-204ENST00000398174 FGD5Q6ZNL6 1462 aa16.08■□□□□ 0.16
HM13-204ENST00000398174 CUL7Q14999 1698 aa16.08■□□□□ 0.16
HM13-204ENST00000398174 RAPGEF2Q9Y4G8 1499 aa16.08■□□□□ 0.16
HM13-204ENST00000398174 PBRM1Q86U86 1689 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms