RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
CPT1A-201ENST00000265641 MYT1Q01538 1121 aa17.99■□□□□ 0.47
CPT1A-201ENST00000265641 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
CPT1A-201ENST00000265641 SUPT5HO00267 1087 aaKnown RBP17.02■□□□□ 0.31
CPT1A-201ENST00000265641 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.31
CPT1A-201ENST00000265641 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
CPT1A-201ENST00000265641 CENPBP07199 599 aaPredicted RBP16.89■□□□□ 0.29
CPT1A-201ENST00000265641 ZEB1P37275 1124 aaPredicted RBP16.88■□□□□ 0.29
CPT1A-201ENST00000265641 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
CPT1A-201ENST00000265641 CCER1Q8TC90 406 aaPredicted RBP16.6■□□□□ 0.25
CPT1A-201ENST00000265641 TTBK1Q5TCY1 1321 aaPredicted RBP16.59■□□□□ 0.25
CPT1A-201ENST00000265641 SHROOM4Q9ULL8 1493 aa16.56■□□□□ 0.24
CPT1A-201ENST00000265641 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.24
CPT1A-201ENST00000265641 HRCP23327 699 aa16.48■□□□□ 0.23
CPT1A-201ENST00000265641 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
CPT1A-201ENST00000265641 EHMT2Q96KQ7 1210 aa16.18■□□□□ 0.18
CPT1A-201ENST00000265641 NEFLP07196 543 aa16.08■□□□□ 0.16
CPT1A-201ENST00000265641 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
CPT1A-201ENST00000265641 YTHDC1Q96MU7 727 aaKnown RBP16■□□□□ 0.15
CPT1A-201ENST00000265641 FAM9AQ8IZU1 332 aaPredicted RBP15.96■□□□□ 0.14
CPT1A-201ENST00000265641 APLP2Q06481 763 aa15.94■□□□□ 0.14
CPT1A-201ENST00000265641 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
CPT1A-201ENST00000265641 TRIM41Q8WV44 630 aa15.77■□□□□ 0.11
CPT1A-201ENST00000265641 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
CPT1A-201ENST00000265641 MYT1LQ9UL68 1186 aa15.62■□□□□ 0.09
CPT1A-201ENST00000265641 RTL5Q5HYW3 569 aaPredicted RBP15.62■□□□□ 0.09
CPT1A-201ENST00000265641 GTF3C3Q9Y5Q9 886 aa15.61■□□□□ 0.09
CPT1A-201ENST00000265641 ACIN1Q9UKV3 1341 aaKnown RBP15.61■□□□□ 0.09
CPT1A-201ENST00000265641 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
CPT1A-201ENST00000265641 DIEXFQ68CQ4 756 aaKnown RBP15.56■□□□□ 0.08
CPT1A-201ENST00000265641 LOC105371045A0A1W2PR82 267 aa15.51■□□□□ 0.07
CPT1A-201ENST00000265641 DAXXQ9UER7 740 aaPredicted RBP15.48■□□□□ 0.07
CPT1A-201ENST00000265641 UBTFP17480 764 aaKnown RBP15.4■□□□□ 0.06
CPT1A-201ENST00000265641 GLIPR1L2Q4G1C9 344 aa15.34■□□□□ 0.05
CPT1A-201ENST00000265641 ZCCHC6Q5VYS8 1495 aaKnown RBP15.31■□□□□ 0.04
CPT1A-201ENST00000265641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
CPT1A-201ENST00000265641 RANGAP1P46060 587 aaPredicted RBP15.28■□□□□ 0.04
CPT1A-201ENST00000265641 CDK11AQ9UQ88 783 aaPredicted RBP15.26■□□□□ 0.03
CPT1A-201ENST00000265641 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
CPT1A-201ENST00000265641 ZNF316A6NFI3 1004 aaPredicted RBP15.17■□□□□ 0.02
CPT1A-201ENST00000265641 DCAF1Q9Y4B6 1507 aa15.15■□□□□ 0.02
CPT1A-201ENST00000265641 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
CPT1A-201ENST00000265641 ANP32EQ9BTT0 268 aa15.12■□□□□ 0.01
CPT1A-201ENST00000265641 PHF23Q9BUL5 403 aaPredicted RBP15.04■□□□□ -0
CPT1A-201ENST00000265641 ATP1B4Q9UN42 357 aaPredicted RBP15.03■□□□□ -0
CPT1A-201ENST00000265641 ANP32AP39687 249 aaKnown RBP15.02■□□□□ -0
CPT1A-201ENST00000265641 NEUROD1Q13562 356 aa15.02■□□□□ -0
CPT1A-201ENST00000265641 BCL11AQ9H165 835 aa14.99□□□□□ -0.01
CPT1A-201ENST00000265641 BCANQ96GW7 911 aa14.97□□□□□ -0.01
CPT1A-201ENST00000265641 EIF5BO60841 1220 aaKnown RBP14.96□□□□□ -0.02
CPT1A-201ENST00000265641 ITGAEP38570 1179 aa14.92□□□□□ -0.02
CPT1A-201ENST00000265641 ANP32CO43423 234 aa14.87□□□□□ -0.03
CPT1A-201ENST00000265641 ABCC9O60706 1549 aa14.78□□□□□ -0.04
CPT1A-201ENST00000265641 FKBP8Q14318 412 aa14.76□□□□□ -0.05
CPT1A-201ENST00000265641 POLR3GLQ9BT43 218 aa14.72□□□□□ -0.05
CPT1A-201ENST00000265641 ZBTB47Q9UFB7 747 aaPredicted RBP14.71□□□□□ -0.06
CPT1A-201ENST00000265641 NACADO15069 1562 aa14.68□□□□□ -0.06
CPT1A-201ENST00000265641 ANP32BQ92688 251 aaKnown RBP14.67□□□□□ -0.06
CPT1A-201ENST00000265641 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
CPT1A-201ENST00000265641 CNGB1Q14028 1251 aaPredicted RBP14.63□□□□□ -0.07
CPT1A-201ENST00000265641 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
CPT1A-201ENST00000265641 ERICH6BQ5W0A0 696 aa14.61□□□□□ -0.07
CPT1A-201ENST00000265641 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
CPT1A-201ENST00000265641 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
CPT1A-201ENST00000265641 MIER1Q8N108 512 aa14.57□□□□□ -0.08
CPT1A-201ENST00000265641 RB1CC1Q8TDY2 1594 aa14.57□□□□□ -0.08
CPT1A-201ENST00000265641 NBR1Q14596 966 aa14.56□□□□□ -0.08
CPT1A-201ENST00000265641 DDRGK1Q96HY6 314 aa14.55□□□□□ -0.08
CPT1A-201ENST00000265641 PPM1GO15355 546 aaPredicted RBP14.54□□□□□ -0.08
CPT1A-201ENST00000265641 TNNT2P45379 298 aaPredicted RBP14.54□□□□□ -0.08
CPT1A-201ENST00000265641 FAM50AQ14320 339 aaKnown RBP14.54□□□□□ -0.08
CPT1A-201ENST00000265641 NPM2Q86SE8 214 aaKnown RBP14.47□□□□□ -0.09
CPT1A-201ENST00000265641 NCLP19338 710 aaKnown RBP14.45□□□□□ -0.1
CPT1A-201ENST00000265641 SUPT16HQ9Y5B9 1047 aaKnown RBP14.45□□□□□ -0.1
CPT1A-201ENST00000265641 CSRNP3Q8WYN3 585 aa14.44□□□□□ -0.1
CPT1A-201ENST00000265641 DEKP35659 375 aaKnown RBP14.44□□□□□ -0.1
CPT1A-201ENST00000265641 UPF2Q9HAU5 1272 aaKnown RBP14.43□□□□□ -0.1
CPT1A-201ENST00000265641 NOP58Q9Y2X3 529 aaKnown RBP14.42□□□□□ -0.1
CPT1A-201ENST00000265641 NEFMP07197 916 aa14.42□□□□□ -0.1
CPT1A-201ENST00000265641 HNRNPUQ00839 825 aaKnown RBP eCLIP14.4□□□□□ -0.1
CPT1A-201ENST00000265641 CCDC136Q96JN2 1154 aa14.4□□□□□ -0.1
CPT1A-201ENST00000265641 DDX10Q13206 875 aaKnown RBP14.39□□□□□ -0.11
CPT1A-201ENST00000265641 TRIM44Q96DX7 344 aaPredicted RBP14.39□□□□□ -0.11
CPT1A-201ENST00000265641 TRIM52Q96A61 297 aa14.39□□□□□ -0.11
CPT1A-201ENST00000265641 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
CPT1A-201ENST00000265641 BECN1Q14457 450 aa14.3□□□□□ -0.12
CPT1A-201ENST00000265641 RBM19Q9Y4C8 960 aaKnown RBP14.3□□□□□ -0.12
CPT1A-201ENST00000265641 PPP4R2Q9NY27 417 aa14.3□□□□□ -0.12
CPT1A-201ENST00000265641 KCNA4P22459 653 aa14.29□□□□□ -0.12
CPT1A-201ENST00000265641 NAP1L5Q96NT1 182 aaPredicted RBP14.27□□□□□ -0.12
CPT1A-201ENST00000265641 TSHZ2Q9NRE2 1034 aa14.27□□□□□ -0.13
CPT1A-201ENST00000265641 L1TD1Q5T7N2 865 aaKnown RBP14.26□□□□□ -0.13
CPT1A-201ENST00000265641 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
CPT1A-201ENST00000265641 TONSLQ96HA7 1378 aa14.25□□□□□ -0.13
CPT1A-201ENST00000265641 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.25□□□□□ -0.13
CPT1A-201ENST00000265641 CANXP27824 592 aaKnown RBP14.24□□□□□ -0.13
CPT1A-201ENST00000265641 RSPH6AQ9H0K4 717 aa14.23□□□□□ -0.13
CPT1A-201ENST00000265641 FAM9BQ8IZU0 186 aa14.22□□□□□ -0.13
CPT1A-201ENST00000265641 CDK11BP21127 795 aaKnown RBP14.21□□□□□ -0.13
CPT1A-201ENST00000265641 ZNF326Q5BKZ1 582 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms