RNA–Protein interactions for RNA: ENST00000487964.5

HM13-219, Transcript of histocompatibility minor 13, humanhuman

TSL 5

Gene HM13, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-219ENST00000487964 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
HM13-219ENST00000487964 ABCC9O60706 1549 aa36.61■■■■□ 3.45
HM13-219ENST00000487964 CCDC180Q9P1Z9 1646 aa36.08■■■■□ 3.37
HM13-219ENST00000487964 DNAJC5BQ9UF47 199 aa34.82■■■■□ 3.16
HM13-219ENST00000487964 RB1CC1Q8TDY2 1594 aa34.63■■■■□ 3.13
HM13-219ENST00000487964 NACADO15069 1562 aa34.23■■■■□ 3.07
HM13-219ENST00000487964 PABPN1Q86U42 306 aaKnown RBP eCLIP33.97■■■■□ 3.03
HM13-219ENST00000487964 DCAF8L2P0C7V8 631 aa33.93■■■■□ 3.02
HM13-219ENST00000487964 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
HM13-219ENST00000487964 BICRAQ9NZM4 1560 aa33.59■■■□□ 2.97
HM13-219ENST00000487964 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
HM13-219ENST00000487964 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
HM13-219ENST00000487964 CC2D2AQ9P2K1 1620 aa33.06■■■□□ 2.88
HM13-219ENST00000487964 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
HM13-219ENST00000487964 ZCCHC6Q5VYS8 1495 aaKnown RBP32.91■■■□□ 2.86
HM13-219ENST00000487964 DCAF1Q9Y4B6 1507 aa32.91■■■□□ 2.86
HM13-219ENST00000487964 EIF4G1Q04637 1599 aaKnown RBP32.84■■■□□ 2.85
HM13-219ENST00000487964 SCRIBQ14160 1630 aa32.81■■■□□ 2.84
HM13-219ENST00000487964 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
HM13-219ENST00000487964 CUX2O14529 1486 aa31.82■■■□□ 2.68
HM13-219ENST00000487964 ERCC6Q03468 1493 aa31.69■■■□□ 2.66
HM13-219ENST00000487964 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
HM13-219ENST00000487964 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
HM13-219ENST00000487964 SMARCA2P51531 1590 aa31.32■■■□□ 2.6
HM13-219ENST00000487964 HMGXB3Q12766 1538 aa31.31■■■□□ 2.6
HM13-219ENST00000487964 NESP48681 1621 aa31.26■■■□□ 2.59
HM13-219ENST00000487964 SMARCA4P51532 1647 aa31.24■■■□□ 2.59
HM13-219ENST00000487964 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
HM13-219ENST00000487964 BAZ1BQ9UIG0 1483 aaKnown RBP31.09■■■□□ 2.57
HM13-219ENST00000487964 BAZ1AQ9NRL2 1556 aaPredicted RBP31.01■■■□□ 2.56
HM13-219ENST00000487964 LAMC3Q9Y6N6 1575 aa31■■■□□ 2.55
HM13-219ENST00000487964 PEG3Q9GZU2 1588 aa30.94■■■□□ 2.54
HM13-219ENST00000487964 KIF21AQ7Z4S6 1674 aa30.89■■■□□ 2.54
HM13-219ENST00000487964 PDS5BQ9NTI5 1447 aa30.84■■■□□ 2.53
HM13-219ENST00000487964 TRIM41Q8WV44 630 aa30.81■■■□□ 2.52
HM13-219ENST00000487964 MROH2BQ7Z745 1585 aa30.7■■■□□ 2.5
HM13-219ENST00000487964 MRC2Q9UBG0 1479 aa30.6■■■□□ 2.49
HM13-219ENST00000487964 CADPSQ9ULU8 1353 aa30.6■■■□□ 2.49
HM13-219ENST00000487964 WDR62O43379 1518 aa30.54■■■□□ 2.48
HM13-219ENST00000487964 CEP164Q9UPV0 1460 aa30.37■■■□□ 2.45
HM13-219ENST00000487964 WIZO95785 1651 aa30.33■■■□□ 2.45
HM13-219ENST00000487964 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
HM13-219ENST00000487964 FANCD2Q9BXW9 1451 aa30.26■■■□□ 2.44
HM13-219ENST00000487964 CFTRP13569 1480 aa30.12■■■□□ 2.41
HM13-219ENST00000487964 RSF1Q96T23 1441 aaPredicted RBP30.09■■■□□ 2.41
HM13-219ENST00000487964 URB2Q14146 1524 aaKnown RBP30.03■■■□□ 2.4
HM13-219ENST00000487964 RIMBP3CA6NJZ7 1639 aa29.94■■■□□ 2.38
HM13-219ENST00000487964 RIMBP3BA6NNM3 1639 aa29.94■■■□□ 2.38
HM13-219ENST00000487964 RIMBP3Q9UFD9 1639 aa29.94■■■□□ 2.38
HM13-219ENST00000487964 TOP2AP11388 1531 aaKnown RBP29.91■■■□□ 2.38
HM13-219ENST00000487964 PRDM2Q13029 1718 aa29.85■■■□□ 2.37
HM13-219ENST00000487964 IFT140Q96RY7 1462 aa29.78■■■□□ 2.36
HM13-219ENST00000487964 ARHGEF11O15085 1522 aa29.77■■■□□ 2.36
HM13-219ENST00000487964 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
HM13-219ENST00000487964 TOPBP1Q92547 1522 aa29.62■■■□□ 2.33
HM13-219ENST00000487964 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
HM13-219ENST00000487964 CYB5RLQ6IPT4 315 aa29.59■■■□□ 2.33
HM13-219ENST00000487964 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
HM13-219ENST00000487964 CCDC88BA6NC98 1476 aa29.55■■■□□ 2.32
HM13-219ENST00000487964 CHD1O14646 1710 aa29.51■■■□□ 2.32
HM13-219ENST00000487964 TRHP20396 242 aaPredicted RBP29.49■■■□□ 2.31
HM13-219ENST00000487964 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
HM13-219ENST00000487964 ARAP1Q96P48 1450 aa29.42■■■□□ 2.3
HM13-219ENST00000487964 AQRO60306 1485 aaKnown RBP eCLIP29.42■■■□□ 2.38e-8■■■■■ 27.3
HM13-219ENST00000487964 TARBP1Q13395 1621 aaKnown RBP29.4■■■□□ 2.3
HM13-219ENST00000487964 SUPT5HO00267 1087 aaKnown RBP29.38■■■□□ 2.29
HM13-219ENST00000487964 FBLN2P98095 1184 aa29.37■■■□□ 2.29
HM13-219ENST00000487964 POLA1P09884 1462 aaPredicted RBP29.28■■■□□ 2.28
HM13-219ENST00000487964 RAD54L2Q9Y4B4 1467 aa29.17■■■□□ 2.26
HM13-219ENST00000487964 SOGA1O94964 1423 aa29.14■■■□□ 2.26
HM13-219ENST00000487964 TDRD9Q8NDG6 1382 aaKnown RBP29.13■■■□□ 2.25
HM13-219ENST00000487964 CLASP1Q7Z460 1538 aa29.12■■■□□ 2.25
HM13-219ENST00000487964 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
HM13-219ENST00000487964 WDR97A6NE52 1622 aa29.11■■■□□ 2.25
HM13-219ENST00000487964 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
HM13-219ENST00000487964 AEBP2Q6ZN18 517 aaPredicted RBP29.09■■■□□ 2.25
HM13-219ENST00000487964 CHMP7Q8WUX9 453 aaPredicted RBP29.07■■■□□ 2.24
HM13-219ENST00000487964 MAGI1Q96QZ7 1491 aaPredicted RBP29.03■■■□□ 2.24
HM13-219ENST00000487964 FGD5Q6ZNL6 1462 aa29.02■■■□□ 2.24
HM13-219ENST00000487964 GRIN2BQ13224 1484 aa28.97■■■□□ 2.23
HM13-219ENST00000487964 SYNJ2O15056 1496 aa28.93■■■□□ 2.22
HM13-219ENST00000487964 CUX1P39880 1505 aa28.88■■■□□ 2.21
HM13-219ENST00000487964 GAPVD1Q14C86 1478 aa28.86■■■□□ 2.21
HM13-219ENST00000487964 PBRM1Q86U86 1689 aa28.84■■■□□ 2.21
HM13-219ENST00000487964 ABCA5Q8WWZ7 1642 aa28.67■■■□□ 2.18
HM13-219ENST00000487964 ABCA10Q8WWZ4 1543 aa28.65■■■□□ 2.18
HM13-219ENST00000487964 ERCC6L2Q5T890 1561 aa28.61■■■□□ 2.17
HM13-219ENST00000487964 GRIN2AQ12879 1464 aa28.59■■■□□ 2.17
HM13-219ENST00000487964 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
HM13-219ENST00000487964 NUP160Q12769 1436 aa28.5■■■□□ 2.15
HM13-219ENST00000487964 ADAMTS12P58397 1594 aa28.5■■■□□ 2.15
HM13-219ENST00000487964 SHROOM2Q13796 1616 aa28.46■■■□□ 2.15
HM13-219ENST00000487964 KIF13AQ9H1H9 1805 aa28.43■■■□□ 2.14
HM13-219ENST00000487964 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
HM13-219ENST00000487964 FHAD1B1AJZ9 1412 aa28.39■■■□□ 2.14
HM13-219ENST00000487964 BIVM-ERCC5R4GMW8 1640 aa28.33■■■□□ 2.13
HM13-219ENST00000487964 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
HM13-219ENST00000487964 ERICH3Q5RHP9 1530 aa28.29■■■□□ 2.12
HM13-219ENST00000487964 PRG4Q92954 1404 aaPredicted RBP28.28■■■□□ 2.12
HM13-219ENST00000487964 JPH4Q96JJ6 628 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms