RNA–Protein interactions for RNA: ENST00000594643.1

KDELR1-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 1, humanhuman

TSL 2

Gene KDELR1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR1-202ENST00000594643 NISCHQ9Y2I1 1504 aa49.45■■■■■ 5.51
KDELR1-202ENST00000594643 CCDC180Q9P1Z9 1646 aa44.14■■■■■ 4.66
KDELR1-202ENST00000594643 ABCC9O60706 1549 aa43.35■■■■■ 4.53
KDELR1-202ENST00000594643 RB1CC1Q8TDY2 1594 aa41.62■■■■■ 4.25
KDELR1-202ENST00000594643 NACADO15069 1562 aa41.51■■■■■ 4.24
KDELR1-202ENST00000594643 DCAF8L2P0C7V8 631 aa41.27■■■■■ 4.2
KDELR1-202ENST00000594643 MYO15BQ96JP2 1530 aa41.2■■■■■ 4.19
KDELR1-202ENST00000594643 ZCCHC6Q5VYS8 1495 aaKnown RBP41.15■■■■■ 4.18
KDELR1-202ENST00000594643 DCAF1Q9Y4B6 1507 aa40.93■■■■■ 4.14
KDELR1-202ENST00000594643 UNC13AQ9UPW8 1703 aa40.78■■■■■ 4.12
KDELR1-202ENST00000594643 PABPN1Q86U42 306 aaKnown RBP eCLIP40.42■■■■■ 4.06
KDELR1-202ENST00000594643 BICRAQ9NZM4 1560 aa40.42■■■■■ 4.06
KDELR1-202ENST00000594643 SCRIBQ14160 1630 aa40.2■■■■■ 4.03
KDELR1-202ENST00000594643 DNAJC5BQ9UF47 199 aa40.02■■■■■ 4
KDELR1-202ENST00000594643 SHROOM4Q9ULL8 1493 aa39.95■■■■□ 3.99
KDELR1-202ENST00000594643 EIF4G1Q04637 1599 aaKnown RBP39.34■■■■□ 3.89
KDELR1-202ENST00000594643 CC2D2AQ9P2K1 1620 aa39.25■■■■□ 3.87
KDELR1-202ENST00000594643 CECR2Q9BXF3 1484 aa38.98■■■■□ 3.83
KDELR1-202ENST00000594643 SMARCA4P51532 1647 aa38.45■■■■□ 3.75
KDELR1-202ENST00000594643 BAZ1AQ9NRL2 1556 aaPredicted RBP38.35■■■■□ 3.73
KDELR1-202ENST00000594643 NCAPD3P42695 1498 aa38.29■■■■□ 3.72
KDELR1-202ENST00000594643 ATAD2BQ9ULI0 1458 aa38.28■■■■□ 3.72
KDELR1-202ENST00000594643 SMARCA2P51531 1590 aa38.23■■■■□ 3.71
KDELR1-202ENST00000594643 HMGXB3Q12766 1538 aa38.12■■■■□ 3.69
KDELR1-202ENST00000594643 MROH2BQ7Z745 1585 aa38.11■■■■□ 3.69
KDELR1-202ENST00000594643 PEG3Q9GZU2 1588 aa38.1■■■■□ 3.69
KDELR1-202ENST00000594643 BAZ1BQ9UIG0 1483 aaKnown RBP37.93■■■■□ 3.66
KDELR1-202ENST00000594643 WIZO95785 1651 aa37.7■■■■□ 3.63
KDELR1-202ENST00000594643 RSF1Q96T23 1441 aaPredicted RBP37.56■■■■□ 3.6
KDELR1-202ENST00000594643 NESP48681 1621 aa37.46■■■■□ 3.59
KDELR1-202ENST00000594643 ERCC6Q03468 1493 aa37.36■■■■□ 3.57
KDELR1-202ENST00000594643 LAMC3Q9Y6N6 1575 aa37.34■■■■□ 3.57
KDELR1-202ENST00000594643 TOP2AP11388 1531 aaKnown RBP37.28■■■■□ 3.56
KDELR1-202ENST00000594643 CADPSQ9ULU8 1353 aa37.14■■■■□ 3.54
KDELR1-202ENST00000594643 CUX2O14529 1486 aa37.11■■■■□ 3.53
KDELR1-202ENST00000594643 KIF21AQ7Z4S6 1674 aa37.06■■■■□ 3.52
KDELR1-202ENST00000594643 PDS5BQ9NTI5 1447 aa37.04■■■■□ 3.52
KDELR1-202ENST00000594643 THOC2Q8NI27 1593 aaKnown RBP37■■■■□ 3.51
KDELR1-202ENST00000594643 CFTRP13569 1480 aa36.89■■■■□ 3.5
KDELR1-202ENST00000594643 CCDC88BA6NC98 1476 aa36.81■■■■□ 3.48
KDELR1-202ENST00000594643 FANCD2Q9BXW9 1451 aa36.73■■■■□ 3.47
KDELR1-202ENST00000594643 MRC2Q9UBG0 1479 aa36.72■■■■□ 3.47
KDELR1-202ENST00000594643 CEP164Q9UPV0 1460 aa36.71■■■■□ 3.47
KDELR1-202ENST00000594643 PRDM2Q13029 1718 aa36.69■■■■□ 3.46
KDELR1-202ENST00000594643 WDR62O43379 1518 aa36.64■■■■□ 3.46
KDELR1-202ENST00000594643 URB2Q14146 1524 aaKnown RBP36.4■■■■□ 3.42
KDELR1-202ENST00000594643 SUPT5HO00267 1087 aaKnown RBP36.31■■■■□ 3.4
KDELR1-202ENST00000594643 DNAJC5Q9H3Z4 198 aa36.23■■■■□ 3.39
KDELR1-202ENST00000594643 TOPBP1Q92547 1522 aa36.13■■■■□ 3.37
KDELR1-202ENST00000594643 ABCC8Q09428 1581 aa36.09■■■■□ 3.37
KDELR1-202ENST00000594643 DNMBPQ6XZF7 1577 aa36.08■■■■□ 3.37
KDELR1-202ENST00000594643 IFT140Q96RY7 1462 aa35.95■■■■□ 3.35
KDELR1-202ENST00000594643 ZNF608Q9ULD9 1512 aaPredicted RBP35.83■■■■□ 3.33
KDELR1-202ENST00000594643 POLA1P09884 1462 aaPredicted RBP35.8■■■■□ 3.32
KDELR1-202ENST00000594643 TARBP1Q13395 1621 aaKnown RBP35.79■■■■□ 3.32
KDELR1-202ENST00000594643 CUX1P39880 1505 aa35.78■■■■□ 3.32
KDELR1-202ENST00000594643 EIF4G3O43432 1585 aaKnown RBP35.7■■■■□ 3.31
KDELR1-202ENST00000594643 FGD5Q6ZNL6 1462 aa35.67■■■■□ 3.3
KDELR1-202ENST00000594643 RAD54L2Q9Y4B4 1467 aa35.63■■■■□ 3.29
KDELR1-202ENST00000594643 SOGA1O94964 1423 aa35.6■■■■□ 3.29
KDELR1-202ENST00000594643 AQRO60306 1485 aaKnown RBP eCLIP35.56■■■■□ 3.282e-9■■■■■ 35.5
KDELR1-202ENST00000594643 WDR97A6NE52 1622 aa35.5■■■■□ 3.27
KDELR1-202ENST00000594643 OSCARQ8IYS5 282 aa35.45■■■■□ 3.27
KDELR1-202ENST00000594643 TDRD9Q8NDG6 1382 aaKnown RBP35.44■■■■□ 3.26
KDELR1-202ENST00000594643 BIVM-ERCC5R4GMW8 1640 aa35.43■■■■□ 3.26
KDELR1-202ENST00000594643 TOP2BQ02880 1626 aa35.41■■■■□ 3.26
KDELR1-202ENST00000594643 WRNQ14191 1432 aaPredicted RBP eCLIP35.4■■■■□ 3.26
KDELR1-202ENST00000594643 SYNJ1O43426 1573 aa35.38■■■■□ 3.25
KDELR1-202ENST00000594643 CHD1O14646 1710 aa35.33■■■■□ 3.25
KDELR1-202ENST00000594643 ABCA10Q8WWZ4 1543 aa35.32■■■■□ 3.25
KDELR1-202ENST00000594643 ABCA5Q8WWZ7 1642 aa35.25■■■■□ 3.23
KDELR1-202ENST00000594643 GRIN2BQ13224 1484 aa35.25■■■■□ 3.23
KDELR1-202ENST00000594643 SNAPC4Q5SXM2 1469 aa35.24■■■■□ 3.23
KDELR1-202ENST00000594643 PBRM1Q86U86 1689 aa35.23■■■■□ 3.23
KDELR1-202ENST00000594643 GAPVD1Q14C86 1478 aa35.22■■■■□ 3.23
KDELR1-202ENST00000594643 MAGI1Q96QZ7 1491 aaPredicted RBP35.2■■■■□ 3.23
KDELR1-202ENST00000594643 FBLN2P98095 1184 aa35.11■■■■□ 3.21
KDELR1-202ENST00000594643 SYNJ2O15056 1496 aa35.06■■■■□ 3.2
KDELR1-202ENST00000594643 RIMBP3CA6NJZ7 1639 aa35.01■■■■□ 3.19
KDELR1-202ENST00000594643 RIMBP3BA6NNM3 1639 aa35.01■■■■□ 3.19
KDELR1-202ENST00000594643 RIMBP3Q9UFD9 1639 aa35.01■■■■□ 3.19
KDELR1-202ENST00000594643 CHMP7Q8WUX9 453 aaPredicted RBP34.99■■■■□ 3.19
KDELR1-202ENST00000594643 ARHGEF11O15085 1522 aa34.96■■■■□ 3.19
KDELR1-202ENST00000594643 ADAMTS12P58397 1594 aa34.92■■■■□ 3.18
KDELR1-202ENST00000594643 CLASP1Q7Z460 1538 aa34.92■■■■□ 3.18
KDELR1-202ENST00000594643 ERICH3Q5RHP9 1530 aa34.9■■■■□ 3.18
KDELR1-202ENST00000594643 TRIM41Q8WV44 630 aa34.88■■■■□ 3.17
KDELR1-202ENST00000594643 GRIN2AQ12879 1464 aa34.81■■■■□ 3.16
KDELR1-202ENST00000594643 FHAD1B1AJZ9 1412 aa34.8■■■■□ 3.16
KDELR1-202ENST00000594643 NUP160Q12769 1436 aa34.68■■■■□ 3.14
KDELR1-202ENST00000594643 CEP170Q5SW79 1584 aa34.67■■■■□ 3.14
KDELR1-202ENST00000594643 KIF27Q86VH2 1401 aa34.67■■■■□ 3.14
KDELR1-202ENST00000594643 ARAP1Q96P48 1450 aa34.66■■■■□ 3.14
KDELR1-202ENST00000594643 IGF1RP08069 1367 aa34.57■■■■□ 3.12
KDELR1-202ENST00000594643 CYB5RLQ6IPT4 315 aa34.56■■■■□ 3.12
KDELR1-202ENST00000594643 CUL7Q14999 1698 aa34.55■■■■□ 3.12
KDELR1-202ENST00000594643 SHROOM2Q13796 1616 aa34.49■■■■□ 3.11
KDELR1-202ENST00000594643 RUSC2Q8N2Y8 1516 aa34.41■■■■□ 3.1
KDELR1-202ENST00000594643 ERCC6L2Q5T890 1561 aa34.4■■■■□ 3.1
KDELR1-202ENST00000594643 CARMIL1Q5VZK9 1371 aa34.35■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms