RNA–Protein interactions for RNA: ENST00000472128.5

HM13-214, Transcript of histocompatibility minor 13, humanhuman

TSL 5

Gene HM13, Length 865 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-214ENST00000472128 AEBP2Q6ZN18 517 aaPredicted RBP27.49■■□□□ 1.99
HM13-214ENST00000472128 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
HM13-214ENST00000472128 NISCHQ9Y2I1 1504 aa25■■□□□ 1.59
HM13-214ENST00000472128 SENP3Q9H4L4 574 aaPredicted RBP23.3■■□□□ 1.32
HM13-214ENST00000472128 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
HM13-214ENST00000472128 CCDC180Q9P1Z9 1646 aa22.28■■□□□ 1.16
HM13-214ENST00000472128 ABCC9O60706 1549 aa21.9■■□□□ 1.1
HM13-214ENST00000472128 FOXD1Q16676 465 aa21.74■■□□□ 1.07
HM13-214ENST00000472128 PLPPR3Q6T4P5 718 aa21.15■□□□□ 0.98
HM13-214ENST00000472128 RB1CC1Q8TDY2 1594 aa21.05■□□□□ 0.96
HM13-214ENST00000472128 NACADO15069 1562 aa21.02■□□□□ 0.96
HM13-214ENST00000472128 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
HM13-214ENST00000472128 DCAF8L2P0C7V8 631 aa20.8■□□□□ 0.92
HM13-214ENST00000472128 ZCCHC6Q5VYS8 1495 aaKnown RBP20.78■□□□□ 0.92
HM13-214ENST00000472128 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
HM13-214ENST00000472128 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
HM13-214ENST00000472128 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
HM13-214ENST00000472128 ADRA2BP18089 450 aa20.53■□□□□ 0.88
HM13-214ENST00000472128 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
HM13-214ENST00000472128 PABPN1Q86U42 306 aaKnown RBP eCLIP20.44■□□□□ 0.86
HM13-214ENST00000472128 PIAS4Q8N2W9 510 aaPredicted RBP20.36■□□□□ 0.85
HM13-214ENST00000472128 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
HM13-214ENST00000472128 SHROOM4Q9ULL8 1493 aa20.28■□□□□ 0.84
HM13-214ENST00000472128 SCRIBQ14160 1630 aa20.22■□□□□ 0.83
HM13-214ENST00000472128 MSH5O43196 834 aa20.16■□□□□ 0.82
HM13-214ENST00000472128 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
HM13-214ENST00000472128 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
HM13-214ENST00000472128 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
HM13-214ENST00000472128 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
HM13-214ENST00000472128 SMARCA4P51532 1647 aa19.4■□□□□ 0.7
HM13-214ENST00000472128 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
HM13-214ENST00000472128 BAZ1AQ9NRL2 1556 aaPredicted RBP19.36■□□□□ 0.69
HM13-214ENST00000472128 SMARCA2P51531 1590 aa19.33■□□□□ 0.69
HM13-214ENST00000472128 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
HM13-214ENST00000472128 HMGXB3Q12766 1538 aa19.29■□□□□ 0.68
HM13-214ENST00000472128 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
HM13-214ENST00000472128 POTEDQ86YR6 584 aa19.23■□□□□ 0.67
HM13-214ENST00000472128 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
HM13-214ENST00000472128 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
HM13-214ENST00000472128 WIZO95785 1651 aa18.97■□□□□ 0.63
HM13-214ENST00000472128 NESP48681 1621 aa18.92■□□□□ 0.62
HM13-214ENST00000472128 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.62
HM13-214ENST00000472128 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
HM13-214ENST00000472128 CUX2O14529 1486 aa18.84■□□□□ 0.61
HM13-214ENST00000472128 CADPSQ9ULU8 1353 aa18.82■□□□□ 0.6
HM13-214ENST00000472128 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
HM13-214ENST00000472128 MAPK8IP2Q13387 824 aaPredicted RBP18.78■□□□□ 0.6
HM13-214ENST00000472128 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.6
HM13-214ENST00000472128 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
HM13-214ENST00000472128 CFTRP13569 1480 aa18.69■□□□□ 0.58
HM13-214ENST00000472128 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
HM13-214ENST00000472128 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
HM13-214ENST00000472128 PPP4R3CPQ6ZMV5 832 aa18.61■□□□□ 0.57
HM13-214ENST00000472128 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
HM13-214ENST00000472128 MRC2Q9UBG0 1479 aa18.58■□□□□ 0.56
HM13-214ENST00000472128 FANCD2Q9BXW9 1451 aa18.57■□□□□ 0.56
HM13-214ENST00000472128 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
HM13-214ENST00000472128 WDR62O43379 1518 aa18.54■□□□□ 0.56
HM13-214ENST00000472128 CEP164Q9UPV0 1460 aa18.54■□□□□ 0.56
HM13-214ENST00000472128 DNAJC5Q9H3Z4 198 aa18.51■□□□□ 0.55
HM13-214ENST00000472128 PRDM2Q13029 1718 aa18.45■□□□□ 0.54
HM13-214ENST00000472128 URB2Q14146 1524 aaKnown RBP18.4■□□□□ 0.54
HM13-214ENST00000472128 ABCC8Q09428 1581 aa18.29■□□□□ 0.52
HM13-214ENST00000472128 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
HM13-214ENST00000472128 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
HM13-214ENST00000472128 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
HM13-214ENST00000472128 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
HM13-214ENST00000472128 CNKSR2Q8WXI2 1034 aa18.16■□□□□ 0.5
HM13-214ENST00000472128 ZNF608Q9ULD9 1512 aaPredicted RBP18.11■□□□□ 0.49
HM13-214ENST00000472128 POLA1P09884 1462 aaPredicted RBP18.09■□□□□ 0.49
HM13-214ENST00000472128 TARBP1Q13395 1621 aaKnown RBP18.09■□□□□ 0.49
HM13-214ENST00000472128 CUX1P39880 1505 aa18.05■□□□□ 0.48
HM13-214ENST00000472128 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
HM13-214ENST00000472128 SOGA1O94964 1423 aa18.01■□□□□ 0.47
HM13-214ENST00000472128 HOXD11P31277 338 aaPredicted RBP18■□□□□ 0.47
HM13-214ENST00000472128 FGD5Q6ZNL6 1462 aa18■□□□□ 0.47
HM13-214ENST00000472128 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
HM13-214ENST00000472128 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
HM13-214ENST00000472128 AQRO60306 1485 aaKnown RBP eCLIP17.98■□□□□ 0.476e-8■■■■□ 25.7
HM13-214ENST00000472128 WDR97A6NE52 1622 aa17.96■□□□□ 0.47
HM13-214ENST00000472128 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
HM13-214ENST00000472128 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
HM13-214ENST00000472128 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
HM13-214ENST00000472128 ABCA10Q8WWZ4 1543 aa17.87■□□□□ 0.45
HM13-214ENST00000472128 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
HM13-214ENST00000472128 TOP2BQ02880 1626 aa17.85■□□□□ 0.45
HM13-214ENST00000472128 BIVM-ERCC5R4GMW8 1640 aa17.84■□□□□ 0.45
HM13-214ENST00000472128 GRIN2BQ13224 1484 aa17.83■□□□□ 0.45
HM13-214ENST00000472128 MAGI1Q96QZ7 1491 aaPredicted RBP17.82■□□□□ 0.44
HM13-214ENST00000472128 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
HM13-214ENST00000472128 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
HM13-214ENST00000472128 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
HM13-214ENST00000472128 CHD1O14646 1710 aa17.78■□□□□ 0.44
HM13-214ENST00000472128 ABCA5Q8WWZ7 1642 aa17.78■□□□□ 0.44
HM13-214ENST00000472128 DCAF8L1A6NGE4 600 aa17.75■□□□□ 0.43
HM13-214ENST00000472128 NPM3O75607 178 aaKnown RBP17.74■□□□□ 0.43
HM13-214ENST00000472128 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
HM13-214ENST00000472128 FBLN2P98095 1184 aa17.72■□□□□ 0.43
HM13-214ENST00000472128 PBRM1Q86U86 1689 aa17.71■□□□□ 0.43
HM13-214ENST00000472128 CHMP7Q8WUX9 453 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms