RNA–Protein interactions for RNA: ENST00000492709.5

HM13-220, Transcript of histocompatibility minor 13, humanhuman

TSL 5

Gene HM13, Length 1,248 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-220ENST00000492709 NISCHQ9Y2I1 1504 aa37.58■■■■□ 3.61
HM13-220ENST00000492709 ABCC9O60706 1549 aa34.2■■■■□ 3.07
HM13-220ENST00000492709 CCDC180Q9P1Z9 1646 aa33.69■■■□□ 2.98
HM13-220ENST00000492709 DNAJC5BQ9UF47 199 aa32.32■■■□□ 2.76
HM13-220ENST00000492709 RB1CC1Q8TDY2 1594 aa32.29■■■□□ 2.76
HM13-220ENST00000492709 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.75
HM13-220ENST00000492709 NACADO15069 1562 aa31.98■■■□□ 2.71
HM13-220ENST00000492709 PABPN1Q86U42 306 aaKnown RBP eCLIP31.94■■■□□ 2.7
HM13-220ENST00000492709 UNC13AQ9UPW8 1703 aa31.53■■■□□ 2.64
HM13-220ENST00000492709 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
HM13-220ENST00000492709 MYO15BQ96JP2 1530 aa31.33■■■□□ 2.61
HM13-220ENST00000492709 ZCCHC6Q5VYS8 1495 aaKnown RBP31.04■■■□□ 2.56
HM13-220ENST00000492709 SCRIBQ14160 1630 aa30.91■■■□□ 2.54
HM13-220ENST00000492709 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
HM13-220ENST00000492709 CC2D2AQ9P2K1 1620 aa30.78■■■□□ 2.52
HM13-220ENST00000492709 CECR2Q9BXF3 1484 aa30.77■■■□□ 2.52
HM13-220ENST00000492709 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
HM13-220ENST00000492709 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
HM13-220ENST00000492709 DNAJC5Q9H3Z4 198 aa29.78■■■□□ 2.36
HM13-220ENST00000492709 ERCC6Q03468 1493 aa29.55■■■□□ 2.32
HM13-220ENST00000492709 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
HM13-220ENST00000492709 ATAD2BQ9ULI0 1458 aa29.47■■■□□ 2.31
HM13-220ENST00000492709 CUX2O14529 1486 aa29.4■■■□□ 2.3
HM13-220ENST00000492709 SMARCA4P51532 1647 aa29.36■■■□□ 2.29
HM13-220ENST00000492709 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
HM13-220ENST00000492709 NESP48681 1621 aa29.31■■■□□ 2.28
HM13-220ENST00000492709 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
HM13-220ENST00000492709 BAZ1BQ9UIG0 1483 aaKnown RBP29.22■■■□□ 2.27
HM13-220ENST00000492709 BAZ1AQ9NRL2 1556 aaPredicted RBP29.17■■■□□ 2.26
HM13-220ENST00000492709 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.24
HM13-220ENST00000492709 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.22
HM13-220ENST00000492709 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
HM13-220ENST00000492709 THOC2Q8NI27 1593 aaKnown RBP28.88■■■□□ 2.21
HM13-220ENST00000492709 PDS5BQ9NTI5 1447 aa28.84■■■□□ 2.21
HM13-220ENST00000492709 KIF21AQ7Z4S6 1674 aa28.83■■■□□ 2.21
HM13-220ENST00000492709 CADPSQ9ULU8 1353 aa28.72■■■□□ 2.19
HM13-220ENST00000492709 WIZO95785 1651 aa28.67■■■□□ 2.18
HM13-220ENST00000492709 TRIM41Q8WV44 630 aa28.61■■■□□ 2.17
HM13-220ENST00000492709 MRC2Q9UBG0 1479 aa28.58■■■□□ 2.17
HM13-220ENST00000492709 WDR62O43379 1518 aa28.44■■■□□ 2.14
HM13-220ENST00000492709 CEP164Q9UPV0 1460 aa28.43■■■□□ 2.14
HM13-220ENST00000492709 FANCD2Q9BXW9 1451 aa28.4■■■□□ 2.14
HM13-220ENST00000492709 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
HM13-220ENST00000492709 CFTRP13569 1480 aa28.27■■■□□ 2.12
HM13-220ENST00000492709 OSCARQ8IYS5 282 aa28.22■■■□□ 2.11
HM13-220ENST00000492709 TOP2AP11388 1531 aaKnown RBP28.21■■■□□ 2.11
HM13-220ENST00000492709 URB2Q14146 1524 aaKnown RBP28.16■■■□□ 2.1
HM13-220ENST00000492709 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
HM13-220ENST00000492709 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
HM13-220ENST00000492709 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
HM13-220ENST00000492709 IFT140Q96RY7 1462 aa27.85■■■□□ 2.05
HM13-220ENST00000492709 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
HM13-220ENST00000492709 RIMBP3CA6NJZ7 1639 aa27.75■■■□□ 2.03
HM13-220ENST00000492709 RIMBP3BA6NNM3 1639 aa27.75■■■□□ 2.03
HM13-220ENST00000492709 RIMBP3Q9UFD9 1639 aa27.75■■■□□ 2.03
HM13-220ENST00000492709 FBLN2P98095 1184 aa27.72■■■□□ 2.03
HM13-220ENST00000492709 ABCC8Q09428 1581 aa27.69■■■□□ 2.02
HM13-220ENST00000492709 AQRO60306 1485 aaKnown RBP eCLIP27.67■■■□□ 2.026e-8■■■■□ 25.7
HM13-220ENST00000492709 CYB5RLQ6IPT4 315 aa27.66■■■□□ 2.02
HM13-220ENST00000492709 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
HM13-220ENST00000492709 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
HM13-220ENST00000492709 ARHGEF11O15085 1522 aa27.64■■■□□ 2.02
HM13-220ENST00000492709 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
HM13-220ENST00000492709 RAD54L2Q9Y4B4 1467 aa27.52■■■□□ 2
HM13-220ENST00000492709 CHD1O14646 1710 aa27.52■■■□□ 2
HM13-220ENST00000492709 POLA1P09884 1462 aaPredicted RBP27.51■■■□□ 2
HM13-220ENST00000492709 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
HM13-220ENST00000492709 TRHP20396 242 aaPredicted RBP27.5■■□□□ 1.99
HM13-220ENST00000492709 SOGA1O94964 1423 aa27.47■■□□□ 1.99
HM13-220ENST00000492709 CHMP7Q8WUX9 453 aaPredicted RBP27.37■■□□□ 1.97
HM13-220ENST00000492709 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
HM13-220ENST00000492709 FGD5Q6ZNL6 1462 aa27.34■■□□□ 1.97
HM13-220ENST00000492709 SNAPC4Q5SXM2 1469 aa27.32■■□□□ 1.96
HM13-220ENST00000492709 CUX1P39880 1505 aa27.26■■□□□ 1.95
HM13-220ENST00000492709 SUPT5HO00267 1087 aaKnown RBP27.22■■□□□ 1.95
HM13-220ENST00000492709 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
HM13-220ENST00000492709 SYNJ1O43426 1573 aa27.15■■□□□ 1.94
HM13-220ENST00000492709 MAGI1Q96QZ7 1491 aaPredicted RBP27.15■■□□□ 1.94
HM13-220ENST00000492709 CLASP1Q7Z460 1538 aa27.12■■□□□ 1.93
HM13-220ENST00000492709 WDR97A6NE52 1622 aa27.11■■□□□ 1.93
HM13-220ENST00000492709 SYNJ2O15056 1496 aa27.1■■□□□ 1.93
HM13-220ENST00000492709 GAPVD1Q14C86 1478 aa27.09■■□□□ 1.93
HM13-220ENST00000492709 PBRM1Q86U86 1689 aa27.02■■□□□ 1.92
HM13-220ENST00000492709 ABCA10Q8WWZ4 1543 aa26.94■■□□□ 1.9
HM13-220ENST00000492709 ABCA5Q8WWZ7 1642 aa26.89■■□□□ 1.9
HM13-220ENST00000492709 WRNQ14191 1432 aaPredicted RBP eCLIP26.87■■□□□ 1.89
HM13-220ENST00000492709 AEBP2Q6ZN18 517 aaPredicted RBP26.86■■□□□ 1.89
HM13-220ENST00000492709 GRIN2AQ12879 1464 aa26.82■■□□□ 1.88
HM13-220ENST00000492709 ERCC6L2Q5T890 1561 aa26.81■■□□□ 1.88
HM13-220ENST00000492709 ADAMTS12P58397 1594 aa26.73■■□□□ 1.87
HM13-220ENST00000492709 CEP170Q5SW79 1584 aa26.73■■□□□ 1.87
HM13-220ENST00000492709 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
HM13-220ENST00000492709 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
HM13-220ENST00000492709 NUP160Q12769 1436 aa26.69■■□□□ 1.86
HM13-220ENST00000492709 BIVM-ERCC5R4GMW8 1640 aa26.68■■□□□ 1.86
HM13-220ENST00000492709 PRG4Q92954 1404 aaPredicted RBP26.59■■□□□ 1.85
HM13-220ENST00000492709 JPH4Q96JJ6 628 aa26.59■■□□□ 1.85
HM13-220ENST00000492709 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.85
HM13-220ENST00000492709 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
HM13-220ENST00000492709 NPM1P06748 294 aaKnown RBP eCLIP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms