Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PRPF39-211ENST00000556782 645 ntTSL 24.88□□□□□ -1.635e-8■■■□□ 16
NCBP2P52298 DDI2-204ENST00000486680 1501 ntTSL 1 (best)13.11□□□□□ -0.312e-9■■■□□ 16
NCBP2P52298 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.952e-9■■■□□ 16
NCBP2P52298 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.14■□□□□ 0.493e-8■■■□□ 16
NCBP2P52298 ZNF326-204ENST00000394583 1956 ntTSL 1 (best)17.61■□□□□ 0.413e-8■■■□□ 16
NCBP2P52298 ZNF326-201ENST00000340281 2729 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.593e-8■■■□□ 16
NCBP2P52298 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.293e-8■■■□□ 16
NCBP2P52298 ARHGEF28-208ENST00000509848 560 ntTSL 418.05■□□□□ 0.481e-10■■■□□ 16
NCBP2P52298 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.331e-10■■■□□ 16
NCBP2P52298 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.321e-10■■■□□ 16
NCBP2P52298 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.58■□□□□ 0.081e-10■■■□□ 16
NCBP2P52298 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.264e-10■■■□□ 16
NCBP2P52298 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.364e-10■■■□□ 16
NCBP2P52298 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC12.63□□□□□ -0.394e-10■■■□□ 16
NCBP2P52298 CASP8-218ENST00000471383 969 ntTSL 1 (best)12.59□□□□□ -0.394e-10■■■□□ 16
NCBP2P52298 CASP8-217ENST00000450491 686 ntTSL 312.04□□□□□ -0.484e-10■■■□□ 16
NCBP2P52298 CASP8-214ENST00000440732 592 ntTSL 411.95□□□□□ -0.54e-10■■■□□ 16
NCBP2P52298 CASP8-207ENST00000392263 1630 ntAPPRIS ALT2 TSL 510.96□□□□□ -0.654e-10■■■□□ 16
NCBP2P52298 CASP8-220ENST00000490682 2911 ntTSL 1 (best)9.31□□□□□ -0.924e-10■■■□□ 16
NCBP2P52298 CASP8-201ENST00000264274 2540 ntTSL 5 BASIC8.96□□□□□ -0.984e-10■■■□□ 16
NCBP2P52298 DAZAP1-207ENST00000589484 3414 ntTSL 211.72□□□□□ -0.531e-6■■■□□ 16
NCBP2P52298 MTPAP-205ENST00000488290 4103 ntTSL 211.93□□□□□ -0.51e-10■■■□□ 16
NCBP2P52298 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.351e-10■■■□□ 16
NCBP2P52298 PGK1-203ENST00000476531 960 ntTSL 29.71□□□□□ -0.863e-10■■■□□ 16
NCBP2P52298 SEPT9-238ENST00000591472 555 ntTSL 411.2□□□□□ -0.622e-6■■■□□ 16
NCBP2P52298 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.73■■□□□ 1.713e-10■■■□□ 15.9
NCBP2P52298 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.92■□□□□ 0.783e-10■■■□□ 15.9
NCBP2P52298 LINC01089-201ENST00000428029 1024 ntTSL 217.56■□□□□ 0.43e-10■■■□□ 15.9
NCBP2P52298 ZNF518A-205ENST00000488700 729 ntTSL 215.76■□□□□ 0.113e-15■■■□□ 15.9
NCBP2P52298 RHOF-206ENST00000545544 826 ntTSL 515.31■□□□□ 0.043e-10■■■□□ 15.9
NCBP2P52298 RHOF-205ENST00000541657 1626 ntTSL 515.2■□□□□ 0.023e-10■■■□□ 15.9
NCBP2P52298 NEPRO-218ENST00000489848 1576 ntTSL 214.63□□□□□ -0.074e-8■■■□□ 15.9
NCBP2P52298 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.3□□□□□ -0.123e-10■■■□□ 15.9
NCBP2P52298 NEPRO-209ENST00000470663 545 ntTSL 414.08□□□□□ -0.164e-8■■■□□ 15.9
NCBP2P52298 LINC01089-208ENST00000541694 875 ntTSL 214.06□□□□□ -0.163e-10■■■□□ 15.9
NCBP2P52298 NEPRO-211ENST00000472637 2179 ntTSL 1 (best)13.6□□□□□ -0.234e-8■■■□□ 15.9
NCBP2P52298 ZC3HC1-210ENST00000483827 760 ntTSL 513.56□□□□□ -0.244e-8■■■□□ 15.9
NCBP2P52298 NEPRO-203ENST00000460410 947 ntTSL 313.47□□□□□ -0.254e-8■■■□□ 15.9
NCBP2P52298 NEPRO-220ENST00000494164 741 ntTSL 413.47□□□□□ -0.254e-8■■■□□ 15.9
NCBP2P52298 ZC3HC1-211ENST00000484432 559 ntTSL 413.23□□□□□ -0.294e-8■■■□□ 15.9
NCBP2P52298 ZC3HC1-205ENST00000470651 567 ntTSL 413.23□□□□□ -0.294e-8■■■□□ 15.9
NCBP2P52298 NEPRO-219ENST00000491121 578 ntTSL 413.03□□□□□ -0.324e-8■■■□□ 15.9
NCBP2P52298 ARV1-204ENST00000450711 991 ntTSL 312.76□□□□□ -0.372e-8■■■□□ 15.9
NCBP2P52298 ARV1-207ENST00000497753 1072 ntTSL 512.76□□□□□ -0.372e-8■■■□□ 15.9
NCBP2P52298 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.42e-8■■■□□ 15.9
NCBP2P52298 NEPRO-214ENST00000473284 2056 ntTSL 212.41□□□□□ -0.424e-8■■■□□ 15.9
NCBP2P52298 FTSJ3-214ENST00000584193 548 ntTSL 412.26□□□□□ -0.454e-8■■■□□ 15.9
NCBP2P52298 ZNF776-204ENST00000473585 506 ntTSL 412.11□□□□□ -0.474e-8■■■□□ 15.9
NCBP2P52298 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC12.1□□□□□ -0.473e-10■■■□□ 15.9
NCBP2P52298 NEPRO-205ENST00000462295 1382 ntTSL 212.05□□□□□ -0.484e-8■■■□□ 15.9
NCBP2P52298 ZC3HC1-203ENST00000360708 1676 ntTSL 2 BASIC11.99□□□□□ -0.494e-8■■■□□ 15.9
NCBP2P52298 Z93930.2-203ENST00000585003 516 ntBASIC11.87□□□□□ -0.514e-8■■■□□ 15.9
NCBP2P52298 NEPRO-207ENST00000469169 1817 ntTSL 211.72□□□□□ -0.534e-8■■■□□ 15.9
NCBP2P52298 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.544e-8■■■□□ 15.9
NCBP2P52298 NEPRO-208ENST00000469809 1512 ntTSL 311.53□□□□□ -0.564e-8■■■□□ 15.9
NCBP2P52298 VPS45-211ENST00000535106 2695 ntTSL 5 BASIC11.37□□□□□ -0.594e-8■■■□□ 15.9
NCBP2P52298 ZC3HC1-209ENST00000481503 1741 ntTSL 5 BASIC11.33□□□□□ -0.64e-8■■■□□ 15.9
NCBP2P52298 VPS45-212ENST00000611412 2064 ntTSL 5 BASIC11.2□□□□□ -0.624e-8■■■□□ 15.9
NCBP2P52298 NEPRO-217ENST00000486271 2842 ntTSL 211.09□□□□□ -0.634e-8■■■□□ 15.9
NCBP2P52298 ZC3HC1-202ENST00000358303 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.644e-8■■■□□ 15.9
NCBP2P52298 ARV1-203ENST00000435927 879 ntTSL 310.88□□□□□ -0.672e-8■■■□□ 15.9
NCBP2P52298 ZC3HC1-201ENST00000311873 2017 ntTSL 2 BASIC10.83□□□□□ -0.684e-8■■■□□ 15.9
NCBP2P52298 ZNF776-202ENST00000431353 549 ntTSL 4 BASIC10.8□□□□□ -0.684e-8■■■□□ 15.9
NCBP2P52298 LINC01089-204ENST00000535643 1014 ntTSL 1 (best)10.79□□□□□ -0.683e-10■■■□□ 15.9
NCBP2P52298 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.764e-8■■■□□ 15.9
NCBP2P52298 NEPRO-224ENST00000496340 520 ntTSL 49.96□□□□□ -0.824e-8■■■□□ 15.9
NCBP2P52298 NEPRO-221ENST00000494575 556 ntTSL 49.96□□□□□ -0.824e-8■■■□□ 15.9
NCBP2P52298 NEPRO-204ENST00000461381 1048 ntTSL 29.96□□□□□ -0.824e-8■■■□□ 15.9
NCBP2P52298 Z93930.2-201ENST00000458080 505 ntTSL 3 BASIC9.75□□□□□ -0.854e-8■■■□□ 15.9
NCBP2P52298 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC9.44□□□□□ -0.94e-8■■■□□ 15.9
NCBP2P52298 NEPRO-222ENST00000494891 547 ntTSL 49.39□□□□□ -0.914e-8■■■□□ 15.9
NCBP2P52298 VPS45-202ENST00000369130 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.934e-8■■■□□ 15.9
NCBP2P52298 VPS45-204ENST00000460366 636 ntTSL 29.23□□□□□ -0.934e-8■■■□□ 15.9
NCBP2P52298 ZC3HC1-204ENST00000467642 1934 ntTSL 29.11□□□□□ -0.954e-8■■■□□ 15.9
NCBP2P52298 FTSJ3-203ENST00000579569 522 ntTSL 49.06□□□□□ -0.964e-8■■■□□ 15.9
NCBP2P52298 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.983e-15■■■□□ 15.9
NCBP2P52298 ZC3HC1-206ENST00000471022 978 ntTSL 58.83□□□□□ -14e-8■■■□□ 15.9
NCBP2P52298 VPS45-201ENST00000369128 2224 ntTSL 2 BASIC8.53□□□□□ -1.044e-8■■■□□ 15.9
NCBP2P52298 ZC3HC1-208ENST00000480193 563 ntTSL 38.22□□□□□ -1.094e-8■■■□□ 15.9
NCBP2P52298 Z93930.2-202ENST00000418292 208 ntTSL 3 BASIC8.13□□□□□ -1.114e-8■■■□□ 15.9
NCBP2P52298 NEPRO-223ENST00000496206 751 ntTSL 57.98□□□□□ -1.134e-8■■■□□ 15.9
NCBP2P52298 NEPRO-212ENST00000472705 1212 ntTSL 27.84□□□□□ -1.154e-8■■■□□ 15.9
NCBP2P52298 VPS45-205ENST00000462852 966 ntTSL 27.84□□□□□ -1.154e-8■■■□□ 15.9
NCBP2P52298 VPS45-208ENST00000478999 468 ntTSL 27.81□□□□□ -1.164e-8■■■□□ 15.9
NCBP2P52298 VPS45-210ENST00000497638 1135 ntTSL 26.54□□□□□ -1.364e-8■■■□□ 15.9
NCBP2P52298 ARV1-206ENST00000480519 1037 ntTSL 55.45□□□□□ -1.542e-8■■■□□ 15.9
NCBP2P52298 VPS45-203ENST00000419023 977 ntTSL 34.49□□□□□ -1.694e-8■■■□□ 15.9
NCBP2P52298 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.78□□□□□ -1.82e-8■■■□□ 15.9
NCBP2P52298 WDR59-214ENST00000568323 558 ntTSL 515.68■□□□□ 0.15e-10■■■□□ 15.9
NCBP2P52298 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.155e-10■■■□□ 15.9
NCBP2P52298 WDR59-211ENST00000564859 488 ntTSL 313.79□□□□□ -0.25e-10■■■□□ 15.9
NCBP2P52298 WDR59-223ENST00000616369 1953 ntTSL 1 (best) BASIC10.92□□□□□ -0.665e-10■■■□□ 15.9
NCBP2P52298 WDR59-204ENST00000562331 570 ntTSL 49.76□□□□□ -0.855e-10■■■□□ 15.9
NCBP2P52298 SEPT9-231ENST00000590595 569 ntTSL 314.65□□□□□ -0.061e-6■■■□□ 15.9
NCBP2P52298 MAP3K13-211ENST00000447637 618 ntTSL 211.78□□□□□ -0.521e-7■■■□□ 15.9
NCBP2P52298 MAP3K13-205ENST00000433092 1460 ntTSL 1 (best)11.05□□□□□ -0.641e-7■■■□□ 15.9
NCBP2P52298 MAP3K13-210ENST00000446828 2737 ntTSL 2 BASIC10.74□□□□□ -0.691e-7■■■□□ 15.9
NCBP2P52298 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.141e-7■■■□□ 15.9
NCBP2P52298 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC7.86□□□□□ -1.151e-7■■■□□ 15.9
NCBP2P52298 MAP3K13-204ENST00000428617 573 ntTSL 47.12□□□□□ -1.271e-7■■■□□ 15.9
Retrieved 100 of 18,329 protein–RNA pairs in 405.9 ms