RNA–Protein interactions for RNA: ENST00000369130.7

VPS45-202, Transcript of vacuolar protein sorting 45 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS45, Length 2,790 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-202ENST00000369130 NISCHQ9Y2I1 1504 aa19.37■□□□□ 0.69
VPS45-202ENST00000369130 SHROOM4Q9ULL8 1493 aa17.4■□□□□ 0.38
VPS45-202ENST00000369130 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
VPS45-202ENST00000369130 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
VPS45-202ENST00000369130 MYO15BQ96JP2 1530 aa16.53■□□□□ 0.24
VPS45-202ENST00000369130 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
VPS45-202ENST00000369130 PCGF6Q9BYE7 350 aa16.47■□□□□ 0.23
VPS45-202ENST00000369130 PPARGC1BQ86YN6 1023 aaKnown RBP16.38■□□□□ 0.21
VPS45-202ENST00000369130 ZCCHC6Q5VYS8 1495 aaKnown RBP16.36■□□□□ 0.21
VPS45-202ENST00000369130 HRCP23327 699 aa16.34■□□□□ 0.21
VPS45-202ENST00000369130 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
VPS45-202ENST00000369130 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
VPS45-202ENST00000369130 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
VPS45-202ENST00000369130 FAM9AQ8IZU1 332 aaPredicted RBP15.96■□□□□ 0.15
VPS45-202ENST00000369130 TRIM26Q12899 539 aaPredicted RBP15.77■□□□□ 0.11
VPS45-202ENST00000369130 DCAF1Q9Y4B6 1507 aa15.74■□□□□ 0.11
VPS45-202ENST00000369130 TRIM41Q8WV44 630 aa15.72■□□□□ 0.11
VPS45-202ENST00000369130 SCRIBQ14160 1630 aa15.63■□□□□ 0.09
VPS45-202ENST00000369130 TTBK1Q5TCY1 1321 aaPredicted RBP15.58■□□□□ 0.08
VPS45-202ENST00000369130 RSF1Q96T23 1441 aaPredicted RBP15.55■□□□□ 0.08
VPS45-202ENST00000369130 RB1CC1Q8TDY2 1594 aa15.5■□□□□ 0.07
VPS45-202ENST00000369130 ABCC9O60706 1549 aa15.48■□□□□ 0.07
VPS45-202ENST00000369130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
VPS45-202ENST00000369130 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
VPS45-202ENST00000369130 CECR2Q9BXF3 1484 aa15.37■□□□□ 0.05
VPS45-202ENST00000369130 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.04
VPS45-202ENST00000369130 CCER1Q8TC90 406 aaPredicted RBP15.29■□□□□ 0.04
VPS45-202ENST00000369130 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
VPS45-202ENST00000369130 WIZO95785 1651 aa15.2■□□□□ 0.02
VPS45-202ENST00000369130 NEUROD1Q13562 356 aa15.13■□□□□ 0.01
VPS45-202ENST00000369130 ABCC8Q09428 1581 aa15.07■□□□□ 0
VPS45-202ENST00000369130 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
VPS45-202ENST00000369130 DIEXFQ68CQ4 756 aaKnown RBP15.05■□□□□ -0
VPS45-202ENST00000369130 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
VPS45-202ENST00000369130 YTHDC1Q96MU7 727 aaKnown RBP15.04■□□□□ -0
VPS45-202ENST00000369130 GTF3C3Q9Y5Q9 886 aa15.01□□□□□ -0.01
VPS45-202ENST00000369130 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
VPS45-202ENST00000369130 ACIN1Q9UKV3 1341 aaKnown RBP15.01□□□□□ -0.01
VPS45-202ENST00000369130 SOGA1O94964 1423 aa14.98□□□□□ -0.01
VPS45-202ENST00000369130 HNRNPUL2Q1KMD3 747 aaKnown RBP14.96□□□□□ -0.02
VPS45-202ENST00000369130 RUSC2Q8N2Y8 1516 aa14.94□□□□□ -0.02
VPS45-202ENST00000369130 PABPN1Q86U42 306 aaKnown RBP eCLIP14.94□□□□□ -0.02
VPS45-202ENST00000369130 CEP162Q5TB80 1403 aa14.91□□□□□ -0.02
VPS45-202ENST00000369130 NACADO15069 1562 aa14.9□□□□□ -0.02
VPS45-202ENST00000369130 BAZ1AQ9NRL2 1556 aaPredicted RBP14.86□□□□□ -0.03
VPS45-202ENST00000369130 PELP1Q8IZL8 1130 aaKnown RBP14.86□□□□□ -0.03
VPS45-202ENST00000369130 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
VPS45-202ENST00000369130 CENPBP07199 599 aaPredicted RBP14.81□□□□□ -0.04
VPS45-202ENST00000369130 EIF4G1Q04637 1599 aaKnown RBP14.8□□□□□ -0.04
VPS45-202ENST00000369130 MIER1Q8N108 512 aa14.78□□□□□ -0.04
VPS45-202ENST00000369130 ZNF316A6NFI3 1004 aaPredicted RBP14.77□□□□□ -0.04
VPS45-202ENST00000369130 SMARCA2P51531 1590 aa14.74□□□□□ -0.05
VPS45-202ENST00000369130 TOP2AP11388 1531 aaKnown RBP14.72□□□□□ -0.05
VPS45-202ENST00000369130 TNIKQ9UKE5 1360 aa14.72□□□□□ -0.05
VPS45-202ENST00000369130 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
VPS45-202ENST00000369130 WRNQ14191 1432 aaPredicted RBP eCLIP14.68□□□□□ -0.06
VPS45-202ENST00000369130 APLP2Q06481 763 aa14.63□□□□□ -0.07
VPS45-202ENST00000369130 UNC13AQ9UPW8 1703 aa14.6□□□□□ -0.07
VPS45-202ENST00000369130 GOLGA3Q08378 1498 aa14.6□□□□□ -0.07
VPS45-202ENST00000369130 ITGAEP38570 1179 aa14.59□□□□□ -0.07
VPS45-202ENST00000369130 CLIP1P30622 1438 aa14.58□□□□□ -0.08
VPS45-202ENST00000369130 SYNJ1O43426 1573 aa14.54□□□□□ -0.08
VPS45-202ENST00000369130 RAPGEF2Q9Y4G8 1499 aa14.53□□□□□ -0.08
VPS45-202ENST00000369130 KANK4Q5T7N3 995 aaPredicted RBP14.49□□□□□ -0.09
VPS45-202ENST00000369130 EEA1Q15075 1411 aa14.48□□□□□ -0.09
VPS45-202ENST00000369130 CEP164Q9UPV0 1460 aa14.46□□□□□ -0.09
VPS45-202ENST00000369130 VPS8Q8N3P4 1428 aa14.43□□□□□ -0.1
VPS45-202ENST00000369130 KCNH8Q96L42 1107 aa14.41□□□□□ -0.1
VPS45-202ENST00000369130 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
VPS45-202ENST00000369130 KIF21BO75037 1637 aa14.37□□□□□ -0.11
VPS45-202ENST00000369130 BAZ1BQ9UIG0 1483 aaKnown RBP14.35□□□□□ -0.11
VPS45-202ENST00000369130 HIRIP3Q9BW71 556 aaPredicted RBP14.34□□□□□ -0.11
VPS45-202ENST00000369130 DHX57Q6P158 1386 aaKnown RBP14.34□□□□□ -0.11
VPS45-202ENST00000369130 BCANQ96GW7 911 aa14.33□□□□□ -0.12
VPS45-202ENST00000369130 ATP1B4Q9UN42 357 aaPredicted RBP14.33□□□□□ -0.12
VPS45-202ENST00000369130 ATAD2BQ9ULI0 1458 aa14.33□□□□□ -0.12
VPS45-202ENST00000369130 P3H3Q8IVL6 736 aa14.3□□□□□ -0.12
VPS45-202ENST00000369130 SUPT16HQ9Y5B9 1047 aaKnown RBP14.29□□□□□ -0.12
VPS45-202ENST00000369130 ARAP1Q96P48 1450 aa14.26□□□□□ -0.13
VPS45-202ENST00000369130 SIN3AQ96ST3 1273 aa14.24□□□□□ -0.13
VPS45-202ENST00000369130 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
VPS45-202ENST00000369130 FAM50AQ14320 339 aaKnown RBP14.22□□□□□ -0.13
VPS45-202ENST00000369130 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
VPS45-202ENST00000369130 TOP2BQ02880 1626 aa14.17□□□□□ -0.14
VPS45-202ENST00000369130 CCNB3Q8WWL7 1395 aa14.15□□□□□ -0.14
VPS45-202ENST00000369130 PRXQ9BXM0 1461 aa14.14□□□□□ -0.15
VPS45-202ENST00000369130 RAB3GAP2Q9H2M9 1393 aa14.14□□□□□ -0.15
VPS45-202ENST00000369130 TRIM52Q96A61 297 aa14.13□□□□□ -0.15
VPS45-202ENST00000369130 CUX1P39880 1505 aa14.12□□□□□ -0.15
VPS45-202ENST00000369130 TSHZ2Q9NRE2 1034 aa14.12□□□□□ -0.15
VPS45-202ENST00000369130 FKBP8Q14318 412 aa14.11□□□□□ -0.15
VPS45-202ENST00000369130 ARHGAP35Q9NRY4 1499 aa14.1□□□□□ -0.15
VPS45-202ENST00000369130 KIF27Q86VH2 1401 aa14.09□□□□□ -0.15
VPS45-202ENST00000369130 CLSPNQ9HAW4 1339 aa14.06□□□□□ -0.16
VPS45-202ENST00000369130 RRBP1Q9P2E9 1410 aaKnown RBP14.06□□□□□ -0.16
VPS45-202ENST00000369130 CUX2O14529 1486 aa14.04□□□□□ -0.16
VPS45-202ENST00000369130 BIVM-ERCC5R4GMW8 1640 aa14.03□□□□□ -0.16
VPS45-202ENST00000369130 PHLDB1Q86UU1 1377 aa14.03□□□□□ -0.16
VPS45-202ENST00000369130 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.16
VPS45-202ENST00000369130 WDR97A6NE52 1622 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms