RNA–Protein interactions for RNA: ENST00000383675.6

NEPRO-202, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 1 (best) BASIC

Gene NEPRO, Length 4,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-202ENST00000383675 DCAF8L2P0C7V8 631 aa17.21■□□□□ 0.35
NEPRO-202ENST00000383675 SUPT5HO00267 1087 aaKnown RBP16.39■□□□□ 0.21
NEPRO-202ENST00000383675 NISCHQ9Y2I1 1504 aa16.38■□□□□ 0.21
NEPRO-202ENST00000383675 SHROOM4Q9ULL8 1493 aa16.18■□□□□ 0.18
NEPRO-202ENST00000383675 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
NEPRO-202ENST00000383675 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
NEPRO-202ENST00000383675 TTBK1Q5TCY1 1321 aaPredicted RBP15.37■□□□□ 0.05
NEPRO-202ENST00000383675 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
NEPRO-202ENST00000383675 APLP2Q06481 763 aa15.19■□□□□ 0.02
NEPRO-202ENST00000383675 RANGAP1P46060 587 aaPredicted RBP15.18■□□□□ 0.02
NEPRO-202ENST00000383675 TRIM41Q8WV44 630 aa15.04■□□□□ -0
NEPRO-202ENST00000383675 PPARGC1BQ86YN6 1023 aaKnown RBP14.89□□□□□ -0.03
NEPRO-202ENST00000383675 ATP1B4Q9UN42 357 aaPredicted RBP14.89□□□□□ -0.03
NEPRO-202ENST00000383675 UBTFP17480 764 aaKnown RBP14.85□□□□□ -0.03
NEPRO-202ENST00000383675 CCER1Q8TC90 406 aaPredicted RBP14.83□□□□□ -0.04
NEPRO-202ENST00000383675 PELP1Q8IZL8 1130 aaKnown RBP14.74□□□□□ -0.05
NEPRO-202ENST00000383675 LOC105371045A0A1W2PR82 267 aa14.67□□□□□ -0.06
NEPRO-202ENST00000383675 ZEB1P37275 1124 aaPredicted RBP14.59□□□□□ -0.07
NEPRO-202ENST00000383675 YTHDC1Q96MU7 727 aaKnown RBP14.57□□□□□ -0.08
NEPRO-202ENST00000383675 CHIC1Q5VXU3 224 aa14.55□□□□□ -0.08
NEPRO-202ENST00000383675 CENPBP07199 599 aaPredicted RBP14.54□□□□□ -0.08
NEPRO-202ENST00000383675 ITGAEP38570 1179 aa14.48□□□□□ -0.09
NEPRO-202ENST00000383675 TRIM26Q12899 539 aaPredicted RBP14.45□□□□□ -0.1
NEPRO-202ENST00000383675 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
NEPRO-202ENST00000383675 HRCP23327 699 aa14.34□□□□□ -0.11
NEPRO-202ENST00000383675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
NEPRO-202ENST00000383675 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
NEPRO-202ENST00000383675 ERICH6Q7L0X2 663 aa14.26□□□□□ -0.13
NEPRO-202ENST00000383675 CNGB1Q14028 1251 aaPredicted RBP14.25□□□□□ -0.13
NEPRO-202ENST00000383675 ABCC9O60706 1549 aa14.24□□□□□ -0.13
NEPRO-202ENST00000383675 POLR3GLQ9BT43 218 aa14.23□□□□□ -0.13
NEPRO-202ENST00000383675 NEFLP07196 543 aa14.22□□□□□ -0.13
NEPRO-202ENST00000383675 MYT1LQ9UL68 1186 aa14.18□□□□□ -0.14
NEPRO-202ENST00000383675 FAM50AQ14320 339 aaKnown RBP14.02□□□□□ -0.17
NEPRO-202ENST00000383675 DIEXFQ68CQ4 756 aaKnown RBP13.97□□□□□ -0.17
NEPRO-202ENST00000383675 NEUROD1Q13562 356 aa13.94□□□□□ -0.18
NEPRO-202ENST00000383675 TRIM52Q96A61 297 aa13.89□□□□□ -0.19
NEPRO-202ENST00000383675 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
NEPRO-202ENST00000383675 SLC4A1APQ9BWU0 796 aaKnown RBP13.87□□□□□ -0.19
NEPRO-202ENST00000383675 ARID3CA6NKF2 412 aa13.86□□□□□ -0.19
NEPRO-202ENST00000383675 FBLN2P98095 1184 aa13.86□□□□□ -0.19
NEPRO-202ENST00000383675 ZNF326Q5BKZ1 582 aaKnown RBP13.8□□□□□ -0.2
NEPRO-202ENST00000383675 CSRNP3Q8WYN3 585 aa13.77□□□□□ -0.21
NEPRO-202ENST00000383675 BCANQ96GW7 911 aa13.75□□□□□ -0.21
NEPRO-202ENST00000383675 DAXXQ9UER7 740 aaPredicted RBP13.71□□□□□ -0.21
NEPRO-202ENST00000383675 GTF3C3Q9Y5Q9 886 aa13.69□□□□□ -0.22
NEPRO-202ENST00000383675 ZNF316A6NFI3 1004 aaPredicted RBP13.63□□□□□ -0.23
NEPRO-202ENST00000383675 SCRIBQ14160 1630 aa13.62□□□□□ -0.23
NEPRO-202ENST00000383675 ZNF777Q9ULD5 760 aaPredicted RBP13.61□□□□□ -0.23
NEPRO-202ENST00000383675 MYT1Q01538 1121 aa13.6□□□□□ -0.23
NEPRO-202ENST00000383675 CLSPNQ9HAW4 1339 aa13.6□□□□□ -0.23
NEPRO-202ENST00000383675 ANP32CO43423 234 aa13.59□□□□□ -0.23
NEPRO-202ENST00000383675 ZCCHC6Q5VYS8 1495 aaKnown RBP13.53□□□□□ -0.24
NEPRO-202ENST00000383675 BCL11AQ9H165 835 aa13.5□□□□□ -0.25
NEPRO-202ENST00000383675 CHIC2Q9UKJ5 165 aa13.45□□□□□ -0.26
NEPRO-202ENST00000383675 ACIN1Q9UKV3 1341 aaKnown RBP13.44□□□□□ -0.26
NEPRO-202ENST00000383675 DDX10Q13206 875 aaKnown RBP13.41□□□□□ -0.26
NEPRO-202ENST00000383675 RTL5Q5HYW3 569 aaPredicted RBP13.41□□□□□ -0.26
NEPRO-202ENST00000383675 SLC24A1O60721 1099 aa13.37□□□□□ -0.27
NEPRO-202ENST00000383675 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
NEPRO-202ENST00000383675 CDK11AQ9UQ88 783 aaPredicted RBP13.37□□□□□ -0.27
NEPRO-202ENST00000383675 MYO15BQ96JP2 1530 aa13.35□□□□□ -0.27
NEPRO-202ENST00000383675 CHGAP10645 457 aaKnown RBP13.35□□□□□ -0.27
NEPRO-202ENST00000383675 SALL2Q9Y467 1007 aaPredicted RBP13.34□□□□□ -0.27
NEPRO-202ENST00000383675 TONSLQ96HA7 1378 aa13.34□□□□□ -0.27
NEPRO-202ENST00000383675 PLPPR3Q6T4P5 718 aa13.33□□□□□ -0.27
NEPRO-202ENST00000383675 CANXP27824 592 aaKnown RBP13.31□□□□□ -0.28
NEPRO-202ENST00000383675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.31□□□□□ -0.28
NEPRO-202ENST00000383675 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
NEPRO-202ENST00000383675 FAM9BQ8IZU0 186 aa13.31□□□□□ -0.28
NEPRO-202ENST00000383675 HNRNPUQ00839 825 aaKnown RBP eCLIP13.29□□□□□ -0.28
NEPRO-202ENST00000383675 FKBP8Q14318 412 aa13.29□□□□□ -0.28
NEPRO-202ENST00000383675 RSF1Q96T23 1441 aaPredicted RBP13.26□□□□□ -0.29
NEPRO-202ENST00000383675 KDM2AQ9Y2K7 1162 aa13.26□□□□□ -0.29
NEPRO-202ENST00000383675 SENP3Q9H4L4 574 aaPredicted RBP13.25□□□□□ -0.29
NEPRO-202ENST00000383675 NPM2Q86SE8 214 aaKnown RBP13.24□□□□□ -0.29
NEPRO-202ENST00000383675 MIER1Q8N108 512 aa13.24□□□□□ -0.29
NEPRO-202ENST00000383675 CLIP1P30622 1438 aa13.23□□□□□ -0.29
NEPRO-202ENST00000383675 RRP7BPQ9NSQ0 103 aa13.23□□□□□ -0.29
NEPRO-202ENST00000383675 ZBTB47Q9UFB7 747 aaPredicted RBP13.23□□□□□ -0.29
NEPRO-202ENST00000383675 MTUS2Q5JR59 1369 aa13.21□□□□□ -0.29
NEPRO-202ENST00000383675 SENP3-EIF4A1A0A087X0R7 540 aa13.21□□□□□ -0.3
NEPRO-202ENST00000383675 CHMP7Q8WUX9 453 aaPredicted RBP13.2□□□□□ -0.3
NEPRO-202ENST00000383675 NEFMP07197 916 aa13.19□□□□□ -0.3
NEPRO-202ENST00000383675 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
NEPRO-202ENST00000383675 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
NEPRO-202ENST00000383675 TSPY4P0CV99 314 aa13.17□□□□□ -0.3
NEPRO-202ENST00000383675 TSPY10P0CW01 314 aa13.17□□□□□ -0.3
NEPRO-202ENST00000383675 IRX6P78412 446 aaPredicted RBP13.17□□□□□ -0.3
NEPRO-202ENST00000383675 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
NEPRO-202ENST00000383675 KCNH8Q96L42 1107 aa13.15□□□□□ -0.3
NEPRO-202ENST00000383675 CEP162Q5TB80 1403 aa13.14□□□□□ -0.31
NEPRO-202ENST00000383675 TMC1Q8TDI8 760 aa13.14□□□□□ -0.31
NEPRO-202ENST00000383675 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
NEPRO-202ENST00000383675 CCDC180Q9P1Z9 1646 aa13.11□□□□□ -0.31
NEPRO-202ENST00000383675 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
NEPRO-202ENST00000383675 ANP32AP39687 249 aaKnown RBP13.09□□□□□ -0.31
NEPRO-202ENST00000383675 WRNQ14191 1432 aaPredicted RBP eCLIP13.09□□□□□ -0.31
NEPRO-202ENST00000383675 RGL3Q3MIN7 710 aa13.09□□□□□ -0.31
NEPRO-202ENST00000383675 CECR2Q9BXF3 1484 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms