RNA–Protein interactions for RNA: ENST00000535106.5

VPS45-211, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-211ENST00000535106 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
VPS45-211ENST00000535106 SHROOM4Q9ULL8 1493 aa21.39■■□□□ 1.01
VPS45-211ENST00000535106 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
VPS45-211ENST00000535106 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
VPS45-211ENST00000535106 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
VPS45-211ENST00000535106 DCAF8L2P0C7V8 631 aa20.75■□□□□ 0.91
VPS45-211ENST00000535106 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
VPS45-211ENST00000535106 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
VPS45-211ENST00000535106 MYO15BQ96JP2 1530 aa20.38■□□□□ 0.85
VPS45-211ENST00000535106 ABCC9O60706 1549 aa19.91■□□□□ 0.78
VPS45-211ENST00000535106 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
VPS45-211ENST00000535106 LOC105371045A0A1W2PR82 267 aa19.87■□□□□ 0.77
VPS45-211ENST00000535106 HRCP23327 699 aa19.84■□□□□ 0.77
VPS45-211ENST00000535106 PCGF6Q9BYE7 350 aa19.84■□□□□ 0.77
VPS45-211ENST00000535106 RSF1Q96T23 1441 aaPredicted RBP19.81■□□□□ 0.76
VPS45-211ENST00000535106 RB1CC1Q8TDY2 1594 aa19.58■□□□□ 0.73
VPS45-211ENST00000535106 NACADO15069 1562 aa19.54■□□□□ 0.72
VPS45-211ENST00000535106 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
VPS45-211ENST00000535106 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
VPS45-211ENST00000535106 PPARGC1BQ86YN6 1023 aaKnown RBP19.5■□□□□ 0.71
VPS45-211ENST00000535106 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
VPS45-211ENST00000535106 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
VPS45-211ENST00000535106 FAM9AQ8IZU1 332 aaPredicted RBP19.41■□□□□ 0.7
VPS45-211ENST00000535106 WIZO95785 1651 aa19.32■□□□□ 0.68
VPS45-211ENST00000535106 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.68
VPS45-211ENST00000535106 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
VPS45-211ENST00000535106 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
VPS45-211ENST00000535106 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
VPS45-211ENST00000535106 SMARCA4P51532 1647 aa18.98■□□□□ 0.63
VPS45-211ENST00000535106 PELP1Q8IZL8 1130 aaKnown RBP18.97■□□□□ 0.63
VPS45-211ENST00000535106 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
VPS45-211ENST00000535106 UNC13AQ9UPW8 1703 aa18.95■□□□□ 0.62
VPS45-211ENST00000535106 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
VPS45-211ENST00000535106 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
VPS45-211ENST00000535106 SMARCA2P51531 1590 aa18.9■□□□□ 0.62
VPS45-211ENST00000535106 PABPN1Q86U42 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
VPS45-211ENST00000535106 SOGA1O94964 1423 aa18.78■□□□□ 0.6
VPS45-211ENST00000535106 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
VPS45-211ENST00000535106 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
VPS45-211ENST00000535106 RUSC2Q8N2Y8 1516 aa18.7■□□□□ 0.58
VPS45-211ENST00000535106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
VPS45-211ENST00000535106 CEP162Q5TB80 1403 aa18.67■□□□□ 0.58
VPS45-211ENST00000535106 CSRNP3Q8WYN3 585 aa18.66■□□□□ 0.58
VPS45-211ENST00000535106 TTBK1Q5TCY1 1321 aaPredicted RBP18.64■□□□□ 0.58
VPS45-211ENST00000535106 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.57
VPS45-211ENST00000535106 TNIKQ9UKE5 1360 aa18.63■□□□□ 0.57
VPS45-211ENST00000535106 PEG3Q9GZU2 1588 aa18.6■□□□□ 0.57
VPS45-211ENST00000535106 EEA1Q15075 1411 aa18.59■□□□□ 0.57
VPS45-211ENST00000535106 UBTFP17480 764 aaKnown RBP18.58■□□□□ 0.57
VPS45-211ENST00000535106 CCER1Q8TC90 406 aaPredicted RBP18.58■□□□□ 0.56
VPS45-211ENST00000535106 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.55
VPS45-211ENST00000535106 GOLGA3Q08378 1498 aa18.5■□□□□ 0.55
VPS45-211ENST00000535106 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
VPS45-211ENST00000535106 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
VPS45-211ENST00000535106 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
VPS45-211ENST00000535106 KIF21BO75037 1637 aa18.34■□□□□ 0.53
VPS45-211ENST00000535106 CLIP1P30622 1438 aa18.32■□□□□ 0.52
VPS45-211ENST00000535106 RAPGEF2Q9Y4G8 1499 aa18.3■□□□□ 0.52
VPS45-211ENST00000535106 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
VPS45-211ENST00000535106 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
VPS45-211ENST00000535106 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
VPS45-211ENST00000535106 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
VPS45-211ENST00000535106 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
VPS45-211ENST00000535106 MYT1Q01538 1121 aa18.18■□□□□ 0.5
VPS45-211ENST00000535106 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
VPS45-211ENST00000535106 BIVM-ERCC5R4GMW8 1640 aa18.14■□□□□ 0.49
VPS45-211ENST00000535106 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
VPS45-211ENST00000535106 ACIN1Q9UKV3 1341 aaKnown RBP18.13■□□□□ 0.49
VPS45-211ENST00000535106 APLP2Q06481 763 aa18.12■□□□□ 0.49
VPS45-211ENST00000535106 ZNF316A6NFI3 1004 aaPredicted RBP18.1■□□□□ 0.49
VPS45-211ENST00000535106 PRXQ9BXM0 1461 aa18.1■□□□□ 0.49
VPS45-211ENST00000535106 HMGXB3Q12766 1538 aa18.09■□□□□ 0.49
VPS45-211ENST00000535106 CUX1P39880 1505 aa18.08■□□□□ 0.48
VPS45-211ENST00000535106 GTF3C3Q9Y5Q9 886 aa18.06■□□□□ 0.48
VPS45-211ENST00000535106 ERICH3Q5RHP9 1530 aa18.04■□□□□ 0.48
VPS45-211ENST00000535106 ARAP1Q96P48 1450 aa18.03■□□□□ 0.48
VPS45-211ENST00000535106 CFTRP13569 1480 aa18.01■□□□□ 0.47
VPS45-211ENST00000535106 KANK4Q5T7N3 995 aaPredicted RBP18■□□□□ 0.47
VPS45-211ENST00000535106 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
VPS45-211ENST00000535106 CENPBP07199 599 aaPredicted RBP17.95■□□□□ 0.46
VPS45-211ENST00000535106 MIER1Q8N108 512 aa17.89■□□□□ 0.45
VPS45-211ENST00000535106 ARHGAP35Q9NRY4 1499 aa17.87■□□□□ 0.45
VPS45-211ENST00000535106 DHX57Q6P158 1386 aaKnown RBP17.86■□□□□ 0.45
VPS45-211ENST00000535106 YTHDC1Q96MU7 727 aaKnown RBP17.84■□□□□ 0.45
VPS45-211ENST00000535106 IGF1RP08069 1367 aa17.84■□□□□ 0.45
VPS45-211ENST00000535106 CUX2O14529 1486 aa17.82■□□□□ 0.44
VPS45-211ENST00000535106 RRBP1Q9P2E9 1410 aaKnown RBP17.81■□□□□ 0.44
VPS45-211ENST00000535106 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
VPS45-211ENST00000535106 CLSPNQ9HAW4 1339 aa17.77■□□□□ 0.44
VPS45-211ENST00000535106 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
VPS45-211ENST00000535106 CCNB3Q8WWL7 1395 aa17.75■□□□□ 0.43
VPS45-211ENST00000535106 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
VPS45-211ENST00000535106 CARMIL1Q5VZK9 1371 aa17.74■□□□□ 0.43
VPS45-211ENST00000535106 ITGAEP38570 1179 aa17.73■□□□□ 0.43
VPS45-211ENST00000535106 TIAM1Q13009 1591 aa17.64■□□□□ 0.41
VPS45-211ENST00000535106 CC2D2AQ9P2K1 1620 aa17.64■□□□□ 0.41
VPS45-211ENST00000535106 P3H3Q8IVL6 736 aa17.64■□□□□ 0.41
VPS45-211ENST00000535106 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
VPS45-211ENST00000535106 RAB3GAP2Q9H2M9 1393 aa17.61■□□□□ 0.41
VPS45-211ENST00000535106 MAP3K1Q13233 1512 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms