RNA–Protein interactions for RNA: ENST00000480193.5

ZC3HC1-208, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 3

Gene ZC3HC1, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-208ENST00000480193 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.02
ZC3HC1-208ENST00000480193 CCDC180Q9P1Z9 1646 aa18.93■□□□□ 0.62
ZC3HC1-208ENST00000480193 ABCC9O60706 1549 aa18.44■□□□□ 0.54
ZC3HC1-208ENST00000480193 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
ZC3HC1-208ENST00000480193 DCAF8L2P0C7V8 631 aa17.79■□□□□ 0.44
ZC3HC1-208ENST00000480193 NACADO15069 1562 aa17.76■□□□□ 0.43
ZC3HC1-208ENST00000480193 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
ZC3HC1-208ENST00000480193 MYO15BQ96JP2 1530 aa17.68■□□□□ 0.42
ZC3HC1-208ENST00000480193 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
ZC3HC1-208ENST00000480193 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
ZC3HC1-208ENST00000480193 SCRIBQ14160 1630 aa17.33■□□□□ 0.37
ZC3HC1-208ENST00000480193 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
ZC3HC1-208ENST00000480193 PABPN1Q86U42 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
ZC3HC1-208ENST00000480193 SHROOM4Q9ULL8 1493 aa17.01■□□□□ 0.31
ZC3HC1-208ENST00000480193 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
ZC3HC1-208ENST00000480193 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.28
ZC3HC1-208ENST00000480193 CECR2Q9BXF3 1484 aa16.69■□□□□ 0.26
ZC3HC1-208ENST00000480193 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
ZC3HC1-208ENST00000480193 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
ZC3HC1-208ENST00000480193 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
ZC3HC1-208ENST00000480193 MROH2BQ7Z745 1585 aa16.52■□□□□ 0.24
ZC3HC1-208ENST00000480193 ATAD2BQ9ULI0 1458 aa16.45■□□□□ 0.22
ZC3HC1-208ENST00000480193 NCAPD3P42695 1498 aa16.4■□□□□ 0.22
ZC3HC1-208ENST00000480193 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
ZC3HC1-208ENST00000480193 PEG3Q9GZU2 1588 aa16.39■□□□□ 0.21
ZC3HC1-208ENST00000480193 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
ZC3HC1-208ENST00000480193 WIZO95785 1651 aa16.35■□□□□ 0.21
ZC3HC1-208ENST00000480193 HMGXB3Q12766 1538 aa16.33■□□□□ 0.2
ZC3HC1-208ENST00000480193 BAZ1BQ9UIG0 1483 aaKnown RBP16.3■□□□□ 0.2
ZC3HC1-208ENST00000480193 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
ZC3HC1-208ENST00000480193 SUPT5HO00267 1087 aaKnown RBP16.03■□□□□ 0.16
ZC3HC1-208ENST00000480193 NESP48681 1621 aa16.01■□□□□ 0.15
ZC3HC1-208ENST00000480193 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
ZC3HC1-208ENST00000480193 LAMC3Q9Y6N6 1575 aa15.93■□□□□ 0.14
ZC3HC1-208ENST00000480193 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
ZC3HC1-208ENST00000480193 CFTRP13569 1480 aa15.87■□□□□ 0.13
ZC3HC1-208ENST00000480193 ERCC6Q03468 1493 aa15.83■□□□□ 0.12
ZC3HC1-208ENST00000480193 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
ZC3HC1-208ENST00000480193 PDS5BQ9NTI5 1447 aa15.8■□□□□ 0.12
ZC3HC1-208ENST00000480193 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
ZC3HC1-208ENST00000480193 FANCD2Q9BXW9 1451 aa15.76■□□□□ 0.11
ZC3HC1-208ENST00000480193 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
ZC3HC1-208ENST00000480193 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.1
ZC3HC1-208ENST00000480193 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
ZC3HC1-208ENST00000480193 WDR62O43379 1518 aa15.63■□□□□ 0.09
ZC3HC1-208ENST00000480193 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
ZC3HC1-208ENST00000480193 CUX2O14529 1486 aa15.61■□□□□ 0.09
ZC3HC1-208ENST00000480193 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
ZC3HC1-208ENST00000480193 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
ZC3HC1-208ENST00000480193 CUX1P39880 1505 aa15.48■□□□□ 0.07
ZC3HC1-208ENST00000480193 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
ZC3HC1-208ENST00000480193 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
ZC3HC1-208ENST00000480193 WRNQ14191 1432 aaPredicted RBP eCLIP15.4■□□□□ 0.06
ZC3HC1-208ENST00000480193 SYNJ1O43426 1573 aa15.4■□□□□ 0.06
ZC3HC1-208ENST00000480193 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
ZC3HC1-208ENST00000480193 DNAJC5Q9H3Z4 198 aa15.38■□□□□ 0.05
ZC3HC1-208ENST00000480193 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
ZC3HC1-208ENST00000480193 BIVM-ERCC5R4GMW8 1640 aa15.36■□□□□ 0.05
ZC3HC1-208ENST00000480193 RAD54L2Q9Y4B4 1467 aa15.36■□□□□ 0.05
ZC3HC1-208ENST00000480193 TOP2BQ02880 1626 aa15.35■□□□□ 0.05
ZC3HC1-208ENST00000480193 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
ZC3HC1-208ENST00000480193 ZNF608Q9ULD9 1512 aaPredicted RBP15.34■□□□□ 0.05
ZC3HC1-208ENST00000480193 SOGA1O94964 1423 aa15.32■□□□□ 0.04
ZC3HC1-208ENST00000480193 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
ZC3HC1-208ENST00000480193 EIF4G3O43432 1585 aaKnown RBP15.27■□□□□ 0.03
ZC3HC1-208ENST00000480193 AQRO60306 1485 aaKnown RBP eCLIP15.26■□□□□ 0.03
ZC3HC1-208ENST00000480193 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
ZC3HC1-208ENST00000480193 ABCA10Q8WWZ4 1543 aa15.23■□□□□ 0.03
ZC3HC1-208ENST00000480193 ABCA5Q8WWZ7 1642 aa15.18■□□□□ 0.02
ZC3HC1-208ENST00000480193 GAPVD1Q14C86 1478 aa15.15■□□□□ 0.02
ZC3HC1-208ENST00000480193 PBRM1Q86U86 1689 aa15.13■□□□□ 0.01
ZC3HC1-208ENST00000480193 GRIN2BQ13224 1484 aa15.12■□□□□ 0.01
ZC3HC1-208ENST00000480193 SNAPC4Q5SXM2 1469 aa15.12■□□□□ 0.01
ZC3HC1-208ENST00000480193 TRIM41Q8WV44 630 aa15.1■□□□□ 0.01
ZC3HC1-208ENST00000480193 MAGI1Q96QZ7 1491 aaPredicted RBP15.06■□□□□ 0
ZC3HC1-208ENST00000480193 CHD1O14646 1710 aa15.06■□□□□ 0
ZC3HC1-208ENST00000480193 CHIC1Q5VXU3 224 aa15.05■□□□□ -0
ZC3HC1-208ENST00000480193 ERICH3Q5RHP9 1530 aa15.04■□□□□ -0
ZC3HC1-208ENST00000480193 RUSC2Q8N2Y8 1516 aa15.04■□□□□ -0
ZC3HC1-208ENST00000480193 KIF27Q86VH2 1401 aa15.04■□□□□ -0
ZC3HC1-208ENST00000480193 ADAMTS12P58397 1594 aa15.03■□□□□ -0
ZC3HC1-208ENST00000480193 SYNJ2O15056 1496 aa15.01□□□□□ -0.01
ZC3HC1-208ENST00000480193 FBLN2P98095 1184 aa15□□□□□ -0.01
ZC3HC1-208ENST00000480193 IGF1RP08069 1367 aa14.99□□□□□ -0.01
ZC3HC1-208ENST00000480193 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
ZC3HC1-208ENST00000480193 CHMP7Q8WUX9 453 aaPredicted RBP14.97□□□□□ -0.01
ZC3HC1-208ENST00000480193 FHAD1B1AJZ9 1412 aa14.97□□□□□ -0.01
ZC3HC1-208ENST00000480193 GRIN2AQ12879 1464 aa14.95□□□□□ -0.02
ZC3HC1-208ENST00000480193 CUL7Q14999 1698 aa14.93□□□□□ -0.02
ZC3HC1-208ENST00000480193 CLASP1Q7Z460 1538 aa14.9□□□□□ -0.02
ZC3HC1-208ENST00000480193 CEP170Q5SW79 1584 aa14.9□□□□□ -0.02
ZC3HC1-208ENST00000480193 CARMIL1Q5VZK9 1371 aa14.89□□□□□ -0.03
ZC3HC1-208ENST00000480193 NUP160Q12769 1436 aa14.88□□□□□ -0.03
ZC3HC1-208ENST00000480193 FAM9AQ8IZU1 332 aaPredicted RBP14.83□□□□□ -0.04
ZC3HC1-208ENST00000480193 EEA1Q15075 1411 aa14.83□□□□□ -0.04
ZC3HC1-208ENST00000480193 PRXQ9BXM0 1461 aa14.82□□□□□ -0.04
ZC3HC1-208ENST00000480193 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
ZC3HC1-208ENST00000480193 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
ZC3HC1-208ENST00000480193 RIMBP3CA6NJZ7 1639 aa14.78□□□□□ -0.04
ZC3HC1-208ENST00000480193 RIMBP3BA6NNM3 1639 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms