RNA–Protein interactions for RNA: ENST00000494575.5

NEPRO-221, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-221ENST00000494575 NISCHQ9Y2I1 1504 aa26.92■■□□□ 1.9
NEPRO-221ENST00000494575 ABCC9O60706 1549 aa24.97■■□□□ 1.59
NEPRO-221ENST00000494575 DNAJC5BQ9UF47 199 aa24.87■■□□□ 1.57
NEPRO-221ENST00000494575 DNAJC5Q9H3Z4 198 aa24.02■■□□□ 1.44
NEPRO-221ENST00000494575 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
NEPRO-221ENST00000494575 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
NEPRO-221ENST00000494575 PABPN1Q86U42 306 aaKnown RBP eCLIP22.92■■□□□ 1.26
NEPRO-221ENST00000494575 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
NEPRO-221ENST00000494575 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.23
NEPRO-221ENST00000494575 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
NEPRO-221ENST00000494575 DCAF8L2P0C7V8 631 aa22.57■■□□□ 1.2
NEPRO-221ENST00000494575 CC2D2AQ9P2K1 1620 aa22.56■■□□□ 1.2
NEPRO-221ENST00000494575 NACADO15069 1562 aa22.55■■□□□ 1.2
NEPRO-221ENST00000494575 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
NEPRO-221ENST00000494575 ZCCHC6Q5VYS8 1495 aaKnown RBP22.38■■□□□ 1.17
NEPRO-221ENST00000494575 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
NEPRO-221ENST00000494575 CUX2O14529 1486 aa22.23■■□□□ 1.15
NEPRO-221ENST00000494575 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
NEPRO-221ENST00000494575 DCAF1Q9Y4B6 1507 aa22.19■■□□□ 1.14
NEPRO-221ENST00000494575 EIF4G1Q04637 1599 aaKnown RBP22.1■■□□□ 1.13
NEPRO-221ENST00000494575 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
NEPRO-221ENST00000494575 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
NEPRO-221ENST00000494575 ERCC6Q03468 1493 aa21.66■■□□□ 1.06
NEPRO-221ENST00000494575 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
NEPRO-221ENST00000494575 THOC2Q8NI27 1593 aaKnown RBP21.22■□□□□ 0.99
NEPRO-221ENST00000494575 NESP48681 1621 aa21.02■□□□□ 0.96
NEPRO-221ENST00000494575 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
NEPRO-221ENST00000494575 RIMBP3CA6NJZ7 1639 aa20.9■□□□□ 0.94
NEPRO-221ENST00000494575 RIMBP3BA6NNM3 1639 aa20.9■□□□□ 0.94
NEPRO-221ENST00000494575 SMARCA4P51532 1647 aa20.9■□□□□ 0.94
NEPRO-221ENST00000494575 RIMBP3Q9UFD9 1639 aa20.9■□□□□ 0.94
NEPRO-221ENST00000494575 ATAD2BQ9ULI0 1458 aa20.86■□□□□ 0.93
NEPRO-221ENST00000494575 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
NEPRO-221ENST00000494575 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
NEPRO-221ENST00000494575 OSCARQ8IYS5 282 aa20.84■□□□□ 0.93
NEPRO-221ENST00000494575 ILDR1Q86SU0 546 aaPredicted RBP20.83■□□□□ 0.93
NEPRO-221ENST00000494575 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
NEPRO-221ENST00000494575 KIF21AQ7Z4S6 1674 aa20.81■□□□□ 0.92
NEPRO-221ENST00000494575 TRHP20396 242 aaPredicted RBP20.73■□□□□ 0.91
NEPRO-221ENST00000494575 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
NEPRO-221ENST00000494575 HMGXB3Q12766 1538 aa20.67■□□□□ 0.9
NEPRO-221ENST00000494575 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
NEPRO-221ENST00000494575 ARHGEF11O15085 1522 aa20.63■□□□□ 0.89
NEPRO-221ENST00000494575 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
NEPRO-221ENST00000494575 WIZO95785 1651 aa20.57■□□□□ 0.88
NEPRO-221ENST00000494575 WDR62O43379 1518 aa20.51■□□□□ 0.87
NEPRO-221ENST00000494575 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
NEPRO-221ENST00000494575 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
NEPRO-221ENST00000494575 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
NEPRO-221ENST00000494575 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
NEPRO-221ENST00000494575 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
NEPRO-221ENST00000494575 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
NEPRO-221ENST00000494575 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
NEPRO-221ENST00000494575 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
NEPRO-221ENST00000494575 CFTRP13569 1480 aa20.08■□□□□ 0.81
NEPRO-221ENST00000494575 CEP164Q9UPV0 1460 aa20.04■□□□□ 0.8
NEPRO-221ENST00000494575 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
NEPRO-221ENST00000494575 CHD1O14646 1710 aa19.93■□□□□ 0.78
NEPRO-221ENST00000494575 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
NEPRO-221ENST00000494575 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
NEPRO-221ENST00000494575 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
NEPRO-221ENST00000494575 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
NEPRO-221ENST00000494575 KDM4FA0A1W2PPD8 638 aa19.78■□□□□ 0.76
NEPRO-221ENST00000494575 ERCC6L2Q5T890 1561 aa19.73■□□□□ 0.75
NEPRO-221ENST00000494575 EIF4G3O43432 1585 aaKnown RBP19.71■□□□□ 0.75
NEPRO-221ENST00000494575 LMTK3Q96Q04 1460 aa19.69■□□□□ 0.74
NEPRO-221ENST00000494575 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
NEPRO-221ENST00000494575 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
NEPRO-221ENST00000494575 FBXO41Q8TF61 875 aa19.66■□□□□ 0.74
NEPRO-221ENST00000494575 KIF13AQ9H1H9 1805 aa19.63■□□□□ 0.73
NEPRO-221ENST00000494575 CLASP1Q7Z460 1538 aa19.6■□□□□ 0.73
NEPRO-221ENST00000494575 SOCS7O14512 581 aa19.59■□□□□ 0.73
NEPRO-221ENST00000494575 DNMBPQ6XZF7 1577 aa19.58■□□□□ 0.73
NEPRO-221ENST00000494575 HECW2Q9P2P5 1572 aa19.58■□□□□ 0.73
NEPRO-221ENST00000494575 FBLN2P98095 1184 aa19.53■□□□□ 0.72
NEPRO-221ENST00000494575 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
NEPRO-221ENST00000494575 CUX1P39880 1505 aa19.51■□□□□ 0.71
NEPRO-221ENST00000494575 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
NEPRO-221ENST00000494575 TARBP1Q13395 1621 aaKnown RBP19.49■□□□□ 0.71
NEPRO-221ENST00000494575 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
NEPRO-221ENST00000494575 GAPVD1Q14C86 1478 aa19.47■□□□□ 0.71
NEPRO-221ENST00000494575 AQRO60306 1485 aaKnown RBP eCLIP19.44■□□□□ 0.7
NEPRO-221ENST00000494575 ILDR2Q71H61 639 aa19.43■□□□□ 0.7
NEPRO-221ENST00000494575 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
NEPRO-221ENST00000494575 SENP3Q9H4L4 574 aaPredicted RBP19.4■□□□□ 0.7
NEPRO-221ENST00000494575 SOGA1O94964 1423 aa19.4■□□□□ 0.7
NEPRO-221ENST00000494575 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
NEPRO-221ENST00000494575 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
NEPRO-221ENST00000494575 KDM6BO15054 1643 aa19.33■□□□□ 0.68
NEPRO-221ENST00000494575 ADGRL1O94910 1474 aa19.28■□□□□ 0.68
NEPRO-221ENST00000494575 SYNJ2O15056 1496 aa19.27■□□□□ 0.67
NEPRO-221ENST00000494575 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
NEPRO-221ENST00000494575 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
NEPRO-221ENST00000494575 TOP2BQ02880 1626 aa19.23■□□□□ 0.67
NEPRO-221ENST00000494575 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
NEPRO-221ENST00000494575 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
NEPRO-221ENST00000494575 SNAPC4Q5SXM2 1469 aa19.2■□□□□ 0.66
NEPRO-221ENST00000494575 DISP3Q9P2K9 1392 aa19.19■□□□□ 0.66
NEPRO-221ENST00000494575 PHF23Q9BUL5 403 aaPredicted RBP19.17■□□□□ 0.66
NEPRO-221ENST00000494575 ABCA5Q8WWZ7 1642 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms