RNA–Protein interactions for RNA: ENST00000542933.5

LINC01089-209, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-209ENST00000542933 NISCHQ9Y2I1 1504 aa37.46■■■■□ 3.59
LINC01089-209ENST00000542933 CCDC180Q9P1Z9 1646 aa33.35■■■□□ 2.93
LINC01089-209ENST00000542933 ABCC9O60706 1549 aa32.42■■■□□ 2.78
LINC01089-209ENST00000542933 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
LINC01089-209ENST00000542933 NACADO15069 1562 aa31.29■■■□□ 2.6
LINC01089-209ENST00000542933 ZCCHC6Q5VYS8 1495 aaKnown RBP31.25■■■□□ 2.59
LINC01089-209ENST00000542933 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
LINC01089-209ENST00000542933 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.58
LINC01089-209ENST00000542933 DCAF1Q9Y4B6 1507 aa31.04■■■□□ 2.56
LINC01089-209ENST00000542933 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
LINC01089-209ENST00000542933 SCRIBQ14160 1630 aa30.37■■■□□ 2.45
LINC01089-209ENST00000542933 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.45
LINC01089-209ENST00000542933 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.435e-8■■■□□ 15.7
LINC01089-209ENST00000542933 SHROOM4Q9ULL8 1493 aa30.09■■■□□ 2.41
LINC01089-209ENST00000542933 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
LINC01089-209ENST00000542933 EIF4G1Q04637 1599 aaKnown RBP29.53■■■□□ 2.32
LINC01089-209ENST00000542933 CC2D2AQ9P2K1 1620 aa29.38■■■□□ 2.29
LINC01089-209ENST00000542933 CECR2Q9BXF3 1484 aa29.14■■■□□ 2.26
LINC01089-209ENST00000542933 SMARCA4P51532 1647 aa29.08■■■□□ 2.25
LINC01089-209ENST00000542933 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
LINC01089-209ENST00000542933 SMARCA2P51531 1590 aa28.87■■■□□ 2.21
LINC01089-209ENST00000542933 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
LINC01089-209ENST00000542933 MROH2BQ7Z745 1585 aa28.85■■■□□ 2.21
LINC01089-209ENST00000542933 NCAPD3P42695 1498 aa28.83■■■□□ 2.21
LINC01089-209ENST00000542933 PEG3Q9GZU2 1588 aa28.81■■■□□ 2.2
LINC01089-209ENST00000542933 HMGXB3Q12766 1538 aa28.75■■■□□ 2.19
LINC01089-209ENST00000542933 BAZ1BQ9UIG0 1483 aaKnown RBP28.65■■■□□ 2.18
LINC01089-209ENST00000542933 WIZO95785 1651 aa28.57■■■□□ 2.16
LINC01089-209ENST00000542933 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
LINC01089-209ENST00000542933 TOP2AP11388 1531 aaKnown RBP28.29■■■□□ 2.12
LINC01089-209ENST00000542933 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
LINC01089-209ENST00000542933 NESP48681 1621 aa28.08■■■□□ 2.09
LINC01089-209ENST00000542933 CADPSQ9ULU8 1353 aa27.98■■■□□ 2.07
LINC01089-209ENST00000542933 ERCC6Q03468 1493 aa27.97■■■□□ 2.07
LINC01089-209ENST00000542933 CCDC88BA6NC98 1476 aa27.9■■■□□ 2.06
LINC01089-209ENST00000542933 PDS5BQ9NTI5 1447 aa27.87■■■□□ 2.05
LINC01089-209ENST00000542933 CFTRP13569 1480 aa27.85■■■□□ 2.05
LINC01089-209ENST00000542933 KIF21AQ7Z4S6 1674 aa27.82■■■□□ 2.04
LINC01089-209ENST00000542933 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
LINC01089-209ENST00000542933 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
LINC01089-209ENST00000542933 THOC2Q8NI27 1593 aaKnown RBP27.71■■■□□ 2.03
LINC01089-209ENST00000542933 FANCD2Q9BXW9 1451 aa27.68■■■□□ 2.02
LINC01089-209ENST00000542933 CUX2O14529 1486 aa27.67■■■□□ 2.02
LINC01089-209ENST00000542933 CEP164Q9UPV0 1460 aa27.65■■■□□ 2.02
LINC01089-209ENST00000542933 MRC2Q9UBG0 1479 aa27.59■■■□□ 2.01
LINC01089-209ENST00000542933 WDR62O43379 1518 aa27.51■■■□□ 2
LINC01089-209ENST00000542933 URB2Q14146 1524 aaKnown RBP27.39■■□□□ 1.98
LINC01089-209ENST00000542933 ABCC8Q09428 1581 aa27.27■■□□□ 1.96
LINC01089-209ENST00000542933 DNMBPQ6XZF7 1577 aa27.26■■□□□ 1.95
LINC01089-209ENST00000542933 TOPBP1Q92547 1522 aa27.25■■□□□ 1.95
LINC01089-209ENST00000542933 CUX1P39880 1505 aa27.08■■□□□ 1.93
LINC01089-209ENST00000542933 IFT140Q96RY7 1462 aa27.06■■□□□ 1.92
LINC01089-209ENST00000542933 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
LINC01089-209ENST00000542933 FGD5Q6ZNL6 1462 aa26.97■■□□□ 1.91
LINC01089-209ENST00000542933 TARBP1Q13395 1621 aaKnown RBP26.97■■□□□ 1.91
LINC01089-209ENST00000542933 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
LINC01089-209ENST00000542933 BIVM-ERCC5R4GMW8 1640 aa26.92■■□□□ 1.9
LINC01089-209ENST00000542933 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
LINC01089-209ENST00000542933 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
LINC01089-209ENST00000542933 SOGA1O94964 1423 aa26.88■■□□□ 1.89
LINC01089-209ENST00000542933 SYNJ1O43426 1573 aa26.88■■□□□ 1.89
LINC01089-209ENST00000542933 EIF4G3O43432 1585 aaKnown RBP26.87■■□□□ 1.89
LINC01089-209ENST00000542933 RAD54L2Q9Y4B4 1467 aa26.87■■□□□ 1.89
LINC01089-209ENST00000542933 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
LINC01089-209ENST00000542933 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.873e-6■■■□□ 15.5
LINC01089-209ENST00000542933 ABCA10Q8WWZ4 1543 aa26.73■■□□□ 1.87
LINC01089-209ENST00000542933 TDRD9Q8NDG6 1382 aaKnown RBP26.7■■□□□ 1.86
LINC01089-209ENST00000542933 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
LINC01089-209ENST00000542933 DNAJC5Q9H3Z4 198 aa26.61■■□□□ 1.85
LINC01089-209ENST00000542933 GAPVD1Q14C86 1478 aa26.61■■□□□ 1.85
LINC01089-209ENST00000542933 PBRM1Q86U86 1689 aa26.6■■□□□ 1.85
LINC01089-209ENST00000542933 GRIN2BQ13224 1484 aa26.59■■□□□ 1.85
LINC01089-209ENST00000542933 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
LINC01089-209ENST00000542933 MAGI1Q96QZ7 1491 aaPredicted RBP26.54■■□□□ 1.84
LINC01089-209ENST00000542933 CHD1O14646 1710 aa26.51■■□□□ 1.83
LINC01089-209ENST00000542933 OSCARQ8IYS5 282 aa26.45■■□□□ 1.82
LINC01089-209ENST00000542933 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
LINC01089-209ENST00000542933 SYNJ2O15056 1496 aa26.42■■□□□ 1.82
LINC01089-209ENST00000542933 ADAMTS12P58397 1594 aa26.38■■□□□ 1.81
LINC01089-209ENST00000542933 FBLN2P98095 1184 aa26.37■■□□□ 1.81
LINC01089-209ENST00000542933 KIF27Q86VH2 1401 aa26.37■■□□□ 1.81
LINC01089-209ENST00000542933 CHMP7Q8WUX9 453 aaPredicted RBP26.33■■□□□ 1.81
LINC01089-209ENST00000542933 TRIM41Q8WV44 630 aa26.3■■□□□ 1.8
LINC01089-209ENST00000542933 FHAD1B1AJZ9 1412 aa26.3■■□□□ 1.8
LINC01089-209ENST00000542933 GRIN2AQ12879 1464 aa26.26■■□□□ 1.79
LINC01089-209ENST00000542933 CUL7Q14999 1698 aa26.24■■□□□ 1.79
LINC01089-209ENST00000542933 CLASP1Q7Z460 1538 aa26.21■■□□□ 1.79
LINC01089-209ENST00000542933 IGF1RP08069 1367 aa26.2■■□□□ 1.79
LINC01089-209ENST00000542933 NUP160Q12769 1436 aa26.14■■□□□ 1.77
LINC01089-209ENST00000542933 CEP170Q5SW79 1584 aa26.12■■□□□ 1.77
LINC01089-209ENST00000542933 RUSC2Q8N2Y8 1516 aa26.1■■□□□ 1.77
LINC01089-209ENST00000542933 RIMBP3CA6NJZ7 1639 aa26.1■■□□□ 1.77
LINC01089-209ENST00000542933 RIMBP3BA6NNM3 1639 aa26.1■■□□□ 1.77
LINC01089-209ENST00000542933 RIMBP3Q9UFD9 1639 aa26.1■■□□□ 1.77
LINC01089-209ENST00000542933 ARHGEF11O15085 1522 aa26.09■■□□□ 1.77
LINC01089-209ENST00000542933 CARMIL1Q5VZK9 1371 aa26.07■■□□□ 1.76
LINC01089-209ENST00000542933 CHIC1Q5VXU3 224 aa26.03■■□□□ 1.76
LINC01089-209ENST00000542933 SHROOM2Q13796 1616 aa25.96■■□□□ 1.75
LINC01089-209ENST00000542933 RAPGEF2Q9Y4G8 1499 aa25.95■■□□□ 1.74
LINC01089-209ENST00000542933 EEA1Q15075 1411 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms