RNA–Protein interactions for RNA: ENST00000460410.5

NEPRO-203, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 3

Gene NEPRO, Length 947 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-203ENST00000460410 NISCHQ9Y2I1 1504 aa38.12■■■■□ 3.69
NEPRO-203ENST00000460410 ABCC9O60706 1549 aa34.56■■■■□ 3.12
NEPRO-203ENST00000460410 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
NEPRO-203ENST00000460410 RB1CC1Q8TDY2 1594 aa32.79■■■□□ 2.84
NEPRO-203ENST00000460410 DNAJC5BQ9UF47 199 aa32.47■■■□□ 2.79
NEPRO-203ENST00000460410 NACADO15069 1562 aa32.45■■■□□ 2.79
NEPRO-203ENST00000460410 UNC13AQ9UPW8 1703 aa32.43■■■□□ 2.78
NEPRO-203ENST00000460410 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
NEPRO-203ENST00000460410 PABPN1Q86U42 306 aaKnown RBP eCLIP32.07■■■□□ 2.72
NEPRO-203ENST00000460410 BICRAQ9NZM4 1560 aa31.89■■■□□ 2.7
NEPRO-203ENST00000460410 MYO15BQ96JP2 1530 aa31.81■■■□□ 2.68
NEPRO-203ENST00000460410 ZCCHC6Q5VYS8 1495 aaKnown RBP31.57■■■□□ 2.64
NEPRO-203ENST00000460410 SCRIBQ14160 1630 aa31.44■■■□□ 2.62
NEPRO-203ENST00000460410 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.61
NEPRO-203ENST00000460410 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
NEPRO-203ENST00000460410 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
NEPRO-203ENST00000460410 EIF4G1Q04637 1599 aaKnown RBP31.1■■■□□ 2.57
NEPRO-203ENST00000460410 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
NEPRO-203ENST00000460410 SMARCA4P51532 1647 aa29.9■■■□□ 2.38
NEPRO-203ENST00000460410 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
NEPRO-203ENST00000460410 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
NEPRO-203ENST00000460410 ERCC6Q03468 1493 aa29.82■■■□□ 2.36
NEPRO-203ENST00000460410 ATAD2BQ9ULI0 1458 aa29.82■■■□□ 2.36
NEPRO-203ENST00000460410 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
NEPRO-203ENST00000460410 HMGXB3Q12766 1538 aa29.75■■■□□ 2.35
NEPRO-203ENST00000460410 CUX2O14529 1486 aa29.74■■■□□ 2.35
NEPRO-203ENST00000460410 NESP48681 1621 aa29.67■■■□□ 2.34
NEPRO-203ENST00000460410 BAZ1AQ9NRL2 1556 aaPredicted RBP29.62■■■□□ 2.33
NEPRO-203ENST00000460410 BAZ1BQ9UIG0 1483 aaKnown RBP29.58■■■□□ 2.33
NEPRO-203ENST00000460410 PEG3Q9GZU2 1588 aa29.5■■■□□ 2.31
NEPRO-203ENST00000460410 KIF21AQ7Z4S6 1674 aa29.49■■■□□ 2.31
NEPRO-203ENST00000460410 THOC2Q8NI27 1593 aaKnown RBP29.46■■■□□ 2.31
NEPRO-203ENST00000460410 MROH2BQ7Z745 1585 aa29.43■■■□□ 2.3
NEPRO-203ENST00000460410 LAMC3Q9Y6N6 1575 aa29.37■■■□□ 2.29
NEPRO-203ENST00000460410 WIZO95785 1651 aa29.22■■■□□ 2.27
NEPRO-203ENST00000460410 PDS5BQ9NTI5 1447 aa29.07■■■□□ 2.24
NEPRO-203ENST00000460410 CADPSQ9ULU8 1353 aa28.95■■■□□ 2.22
NEPRO-203ENST00000460410 MRC2Q9UBG0 1479 aa28.92■■■□□ 2.22
NEPRO-203ENST00000460410 WDR62O43379 1518 aa28.89■■■□□ 2.22
NEPRO-203ENST00000460410 CEP164Q9UPV0 1460 aa28.79■■■□□ 2.2
NEPRO-203ENST00000460410 PRDM2Q13029 1718 aa28.76■■■□□ 2.19
NEPRO-203ENST00000460410 FANCD2Q9BXW9 1451 aa28.73■■■□□ 2.19
NEPRO-203ENST00000460410 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
NEPRO-203ENST00000460410 RSF1Q96T23 1441 aaPredicted RBP28.65■■■□□ 2.18
NEPRO-203ENST00000460410 TRIM41Q8WV44 630 aa28.64■■■□□ 2.18
NEPRO-203ENST00000460410 CFTRP13569 1480 aa28.62■■■□□ 2.17
NEPRO-203ENST00000460410 URB2Q14146 1524 aaKnown RBP28.54■■■□□ 2.16
NEPRO-203ENST00000460410 CCDC88BA6NC98 1476 aa28.32■■■□□ 2.12
NEPRO-203ENST00000460410 OSCARQ8IYS5 282 aa28.27■■■□□ 2.12
NEPRO-203ENST00000460410 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
NEPRO-203ENST00000460410 RIMBP3CA6NJZ7 1639 aa28.21■■■□□ 2.11
NEPRO-203ENST00000460410 RIMBP3BA6NNM3 1639 aa28.21■■■□□ 2.11
NEPRO-203ENST00000460410 RIMBP3Q9UFD9 1639 aa28.21■■■□□ 2.11
NEPRO-203ENST00000460410 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
NEPRO-203ENST00000460410 EIF4G3O43432 1585 aaKnown RBP28.18■■■□□ 2.1
NEPRO-203ENST00000460410 CHD1O14646 1710 aa28.16■■■□□ 2.1
NEPRO-203ENST00000460410 IFT140Q96RY7 1462 aa28.15■■■□□ 2.1
NEPRO-203ENST00000460410 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
NEPRO-203ENST00000460410 TARBP1Q13395 1621 aaKnown RBP28.03■■■□□ 2.08
NEPRO-203ENST00000460410 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
NEPRO-203ENST00000460410 ARHGEF11O15085 1522 aa27.99■■■□□ 2.07
NEPRO-203ENST00000460410 AQRO60306 1485 aaKnown RBP eCLIP27.92■■■□□ 2.06
NEPRO-203ENST00000460410 POLA1P09884 1462 aaPredicted RBP27.88■■■□□ 2.05
NEPRO-203ENST00000460410 RAD54L2Q9Y4B4 1467 aa27.82■■■□□ 2.04
NEPRO-203ENST00000460410 FBLN2P98095 1184 aa27.76■■■□□ 2.03
NEPRO-203ENST00000460410 FGD5Q6ZNL6 1462 aa27.71■■■□□ 2.03
NEPRO-203ENST00000460410 CYB5RLQ6IPT4 315 aa27.71■■■□□ 2.03
NEPRO-203ENST00000460410 WDR97A6NE52 1622 aa27.7■■■□□ 2.02
NEPRO-203ENST00000460410 ARAP1Q96P48 1450 aa27.7■■■□□ 2.02
NEPRO-203ENST00000460410 PBRM1Q86U86 1689 aa27.69■■■□□ 2.02
NEPRO-203ENST00000460410 SOGA1O94964 1423 aa27.68■■■□□ 2.02
NEPRO-203ENST00000460410 TDRD9Q8NDG6 1382 aaKnown RBP27.68■■■□□ 2.02
NEPRO-203ENST00000460410 CUX1P39880 1505 aa27.67■■■□□ 2.02
NEPRO-203ENST00000460410 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
NEPRO-203ENST00000460410 CLASP1Q7Z460 1538 aa27.58■■■□□ 2.01
NEPRO-203ENST00000460410 SYNJ1O43426 1573 aa27.56■■■□□ 2
NEPRO-203ENST00000460410 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■□□□ 1.99
NEPRO-203ENST00000460410 TRHP20396 242 aaPredicted RBP27.5■■□□□ 1.99
NEPRO-203ENST00000460410 GRIN2BQ13224 1484 aa27.47■■□□□ 1.99
NEPRO-203ENST00000460410 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
NEPRO-203ENST00000460410 ABCA5Q8WWZ7 1642 aa27.43■■□□□ 1.98
NEPRO-203ENST00000460410 SYNJ2O15056 1496 aa27.42■■□□□ 1.98
NEPRO-203ENST00000460410 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
NEPRO-203ENST00000460410 SUPT5HO00267 1087 aaKnown RBP27.32■■□□□ 1.96
NEPRO-203ENST00000460410 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
NEPRO-203ENST00000460410 BIVM-ERCC5R4GMW8 1640 aa27.27■■□□□ 1.96
NEPRO-203ENST00000460410 ADAMTS12P58397 1594 aa27.23■■□□□ 1.95
NEPRO-203ENST00000460410 ERCC6L2Q5T890 1561 aa27.23■■□□□ 1.95
NEPRO-203ENST00000460410 TOP2BQ02880 1626 aa27.19■■□□□ 1.94
NEPRO-203ENST00000460410 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
NEPRO-203ENST00000460410 GRIN2AQ12879 1464 aa27.17■■□□□ 1.94
NEPRO-203ENST00000460410 WRNQ14191 1432 aaPredicted RBP eCLIP27.12■■□□□ 1.93
NEPRO-203ENST00000460410 SHROOM2Q13796 1616 aa27.08■■□□□ 1.93
NEPRO-203ENST00000460410 KIF13AQ9H1H9 1805 aa27.02■■□□□ 1.92
NEPRO-203ENST00000460410 NUP160Q12769 1436 aa27.02■■□□□ 1.92
NEPRO-203ENST00000460410 ERICH3Q5RHP9 1530 aa26.99■■□□□ 1.91
NEPRO-203ENST00000460410 FHAD1B1AJZ9 1412 aa26.97■■□□□ 1.91
NEPRO-203ENST00000460410 RUSC2Q8N2Y8 1516 aa26.87■■□□□ 1.89
NEPRO-203ENST00000460410 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
NEPRO-203ENST00000460410 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms