RNA–Protein interactions for RNA: ENST00000462295.5

NEPRO-205, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 1,382 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-205ENST00000462295 NISCHQ9Y2I1 1504 aa34.57■■■■□ 3.12
NEPRO-205ENST00000462295 ABCC9O60706 1549 aa31.17■■■□□ 2.58
NEPRO-205ENST00000462295 CCDC180Q9P1Z9 1646 aa30.97■■■□□ 2.55
NEPRO-205ENST00000462295 DNAJC5BQ9UF47 199 aa29.65■■■□□ 2.34
NEPRO-205ENST00000462295 RB1CC1Q8TDY2 1594 aa29.52■■■□□ 2.32
NEPRO-205ENST00000462295 NACADO15069 1562 aa29.33■■■□□ 2.29
NEPRO-205ENST00000462295 DCAF8L2P0C7V8 631 aa29.1■■■□□ 2.25
NEPRO-205ENST00000462295 PABPN1Q86U42 306 aaKnown RBP eCLIP29.06■■■□□ 2.24
NEPRO-205ENST00000462295 UNC13AQ9UPW8 1703 aa29.03■■■□□ 2.24
NEPRO-205ENST00000462295 MYO15BQ96JP2 1530 aa28.95■■■□□ 2.22
NEPRO-205ENST00000462295 BICRAQ9NZM4 1560 aa28.9■■■□□ 2.22
NEPRO-205ENST00000462295 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
NEPRO-205ENST00000462295 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
NEPRO-205ENST00000462295 SHROOM4Q9ULL8 1493 aa28.25■■■□□ 2.11
NEPRO-205ENST00000462295 SCRIBQ14160 1630 aa28.23■■■□□ 2.11
NEPRO-205ENST00000462295 CC2D2AQ9P2K1 1620 aa28.17■■■□□ 2.1
NEPRO-205ENST00000462295 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
NEPRO-205ENST00000462295 EIF4G1Q04637 1599 aaKnown RBP28.07■■■□□ 2.08
NEPRO-205ENST00000462295 NCAPD3P42695 1498 aa27.18■■□□□ 1.94
NEPRO-205ENST00000462295 DNAJC5Q9H3Z4 198 aa27.17■■□□□ 1.94
NEPRO-205ENST00000462295 ATAD2BQ9ULI0 1458 aa27.07■■□□□ 1.92
NEPRO-205ENST00000462295 SMARCA4P51532 1647 aa26.96■■□□□ 1.91
NEPRO-205ENST00000462295 HMGXB3Q12766 1538 aa26.87■■□□□ 1.89
NEPRO-205ENST00000462295 CUX2O14529 1486 aa26.85■■□□□ 1.89
NEPRO-205ENST00000462295 SMARCA2P51531 1590 aa26.85■■□□□ 1.89
NEPRO-205ENST00000462295 NESP48681 1621 aa26.83■■□□□ 1.89
NEPRO-205ENST00000462295 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
NEPRO-205ENST00000462295 PEG3Q9GZU2 1588 aa26.75■■□□□ 1.87
NEPRO-205ENST00000462295 BAZ1AQ9NRL2 1556 aaPredicted RBP26.74■■□□□ 1.87
NEPRO-205ENST00000462295 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
NEPRO-205ENST00000462295 BAZ1BQ9UIG0 1483 aaKnown RBP26.67■■□□□ 1.86
NEPRO-205ENST00000462295 THOC2Q8NI27 1593 aaKnown RBP26.52■■□□□ 1.84
NEPRO-205ENST00000462295 LAMC3Q9Y6N6 1575 aa26.48■■□□□ 1.83
NEPRO-205ENST00000462295 KIF21AQ7Z4S6 1674 aa26.4■■□□□ 1.82
NEPRO-205ENST00000462295 WIZO95785 1651 aa26.32■■□□□ 1.8
NEPRO-205ENST00000462295 CADPSQ9ULU8 1353 aa26.31■■□□□ 1.8
NEPRO-205ENST00000462295 PDS5BQ9NTI5 1447 aa26.29■■□□□ 1.8
NEPRO-205ENST00000462295 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
NEPRO-205ENST00000462295 WDR62O43379 1518 aa26.1■■□□□ 1.77
NEPRO-205ENST00000462295 RSF1Q96T23 1441 aaPredicted RBP26.08■■□□□ 1.76
NEPRO-205ENST00000462295 CFTRP13569 1480 aa26■■□□□ 1.75
NEPRO-205ENST00000462295 FANCD2Q9BXW9 1451 aa25.96■■□□□ 1.75
NEPRO-205ENST00000462295 CEP164Q9UPV0 1460 aa25.93■■□□□ 1.74
NEPRO-205ENST00000462295 TOP2AP11388 1531 aaKnown RBP25.89■■□□□ 1.74
NEPRO-205ENST00000462295 URB2Q14146 1524 aaKnown RBP25.85■■□□□ 1.73
NEPRO-205ENST00000462295 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
NEPRO-205ENST00000462295 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
NEPRO-205ENST00000462295 OSCARQ8IYS5 282 aa25.65■■□□□ 1.7
NEPRO-205ENST00000462295 PRDM2Q13029 1718 aa25.61■■□□□ 1.69
NEPRO-205ENST00000462295 ZNF608Q9ULD9 1512 aaPredicted RBP25.57■■□□□ 1.68
NEPRO-205ENST00000462295 TOPBP1Q92547 1522 aa25.49■■□□□ 1.67
NEPRO-205ENST00000462295 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
NEPRO-205ENST00000462295 RIMBP3CA6NJZ7 1639 aa25.36■■□□□ 1.65
NEPRO-205ENST00000462295 RIMBP3BA6NNM3 1639 aa25.36■■□□□ 1.65
NEPRO-205ENST00000462295 RIMBP3Q9UFD9 1639 aa25.36■■□□□ 1.65
NEPRO-205ENST00000462295 TARBP1Q13395 1621 aaKnown RBP25.33■■□□□ 1.65
NEPRO-205ENST00000462295 DNMBPQ6XZF7 1577 aa25.33■■□□□ 1.64
NEPRO-205ENST00000462295 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
NEPRO-205ENST00000462295 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
NEPRO-205ENST00000462295 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.64
NEPRO-205ENST00000462295 ARHGEF11O15085 1522 aa25.25■■□□□ 1.63
NEPRO-205ENST00000462295 POLA1P09884 1462 aaPredicted RBP25.23■■□□□ 1.63
NEPRO-205ENST00000462295 RAD54L2Q9Y4B4 1467 aa25.18■■□□□ 1.62
NEPRO-205ENST00000462295 CHD1O14646 1710 aa25.16■■□□□ 1.62
NEPRO-205ENST00000462295 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
NEPRO-205ENST00000462295 SOGA1O94964 1423 aa25.08■■□□□ 1.61
NEPRO-205ENST00000462295 CYB5RLQ6IPT4 315 aa25.07■■□□□ 1.6
NEPRO-205ENST00000462295 CUX1P39880 1505 aa25.05■■□□□ 1.6
NEPRO-205ENST00000462295 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
NEPRO-205ENST00000462295 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
NEPRO-205ENST00000462295 FBLN2P98095 1184 aa24.99■■□□□ 1.59
NEPRO-205ENST00000462295 SNAPC4Q5SXM2 1469 aa24.94■■□□□ 1.58
NEPRO-205ENST00000462295 CLASP1Q7Z460 1538 aa24.92■■□□□ 1.58
NEPRO-205ENST00000462295 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
NEPRO-205ENST00000462295 GRIN2BQ13224 1484 aa24.84■■□□□ 1.57
NEPRO-205ENST00000462295 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
NEPRO-205ENST00000462295 CHMP7Q8WUX9 453 aaPredicted RBP24.8■■□□□ 1.56
NEPRO-205ENST00000462295 SYNJ2O15056 1496 aa24.78■■□□□ 1.56
NEPRO-205ENST00000462295 ABCA10Q8WWZ4 1543 aa24.75■■□□□ 1.55
NEPRO-205ENST00000462295 GAPVD1Q14C86 1478 aa24.75■■□□□ 1.55
NEPRO-205ENST00000462295 SYNJ1O43426 1573 aa24.74■■□□□ 1.55
NEPRO-205ENST00000462295 ABCA5Q8WWZ7 1642 aa24.73■■□□□ 1.55
NEPRO-205ENST00000462295 PBRM1Q86U86 1689 aa24.73■■□□□ 1.55
NEPRO-205ENST00000462295 TRHP20396 242 aaPredicted RBP24.7■■□□□ 1.55
NEPRO-205ENST00000462295 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
NEPRO-205ENST00000462295 ERCC6L2Q5T890 1561 aa24.61■■□□□ 1.53
NEPRO-205ENST00000462295 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
NEPRO-205ENST00000462295 BIVM-ERCC5R4GMW8 1640 aa24.55■■□□□ 1.52
NEPRO-205ENST00000462295 GRIN2AQ12879 1464 aa24.54■■□□□ 1.52
NEPRO-205ENST00000462295 WRNQ14191 1432 aaPredicted RBP eCLIP24.54■■□□□ 1.52
NEPRO-205ENST00000462295 NUP160Q12769 1436 aa24.53■■□□□ 1.52
NEPRO-205ENST00000462295 CEP170Q5SW79 1584 aa24.52■■□□□ 1.52
NEPRO-205ENST00000462295 ADAMTS12P58397 1594 aa24.51■■□□□ 1.51
NEPRO-205ENST00000462295 SHROOM2Q13796 1616 aa24.45■■□□□ 1.5
NEPRO-205ENST00000462295 FHAD1B1AJZ9 1412 aa24.43■■□□□ 1.5
NEPRO-205ENST00000462295 ERICH3Q5RHP9 1530 aa24.39■■□□□ 1.49
NEPRO-205ENST00000462295 JPH4Q96JJ6 628 aa24.27■■□□□ 1.48
NEPRO-205ENST00000462295 PRG4Q92954 1404 aaPredicted RBP24.25■■□□□ 1.47
NEPRO-205ENST00000462295 KIF13AQ9H1H9 1805 aa24.2■■□□□ 1.46
NEPRO-205ENST00000462295 IGF1RP08069 1367 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms