RNA–Protein interactions for RNA: ENST00000484432.1

ZC3HC1-211, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 4

Gene ZC3HC1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-211ENST00000484432 NISCHQ9Y2I1 1504 aa34.66■■■■□ 3.14
ZC3HC1-211ENST00000484432 CCDC180Q9P1Z9 1646 aa30.75■■■□□ 2.51
ZC3HC1-211ENST00000484432 ABCC9O60706 1549 aa30.05■■■□□ 2.4
ZC3HC1-211ENST00000484432 RB1CC1Q8TDY2 1594 aa28.94■■■□□ 2.22
ZC3HC1-211ENST00000484432 NACADO15069 1562 aa28.93■■■□□ 2.22
ZC3HC1-211ENST00000484432 DCAF8L2P0C7V8 631 aa28.92■■■□□ 2.22
ZC3HC1-211ENST00000484432 ZCCHC6Q5VYS8 1495 aaKnown RBP28.88■■■□□ 2.21
ZC3HC1-211ENST00000484432 MYO15BQ96JP2 1530 aa28.81■■■□□ 2.2
ZC3HC1-211ENST00000484432 DCAF1Q9Y4B6 1507 aa28.7■■■□□ 2.19
ZC3HC1-211ENST00000484432 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
ZC3HC1-211ENST00000484432 PABPN1Q86U42 306 aaKnown RBP eCLIP28.11■■■□□ 2.09
ZC3HC1-211ENST00000484432 BICRAQ9NZM4 1560 aa28.05■■■□□ 2.08
ZC3HC1-211ENST00000484432 SCRIBQ14160 1630 aa28.04■■■□□ 2.08
ZC3HC1-211ENST00000484432 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
ZC3HC1-211ENST00000484432 DNAJC5BQ9UF47 199 aa27.56■■■□□ 2
ZC3HC1-211ENST00000484432 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
ZC3HC1-211ENST00000484432 CC2D2AQ9P2K1 1620 aa27.17■■□□□ 1.94
ZC3HC1-211ENST00000484432 CECR2Q9BXF3 1484 aa27.01■■□□□ 1.91
ZC3HC1-211ENST00000484432 BAZ1AQ9NRL2 1556 aaPredicted RBP26.86■■□□□ 1.89
ZC3HC1-211ENST00000484432 SMARCA4P51532 1647 aa26.85■■□□□ 1.89
ZC3HC1-211ENST00000484432 NCAPD3P42695 1498 aa26.73■■□□□ 1.87
ZC3HC1-211ENST00000484432 ATAD2BQ9ULI0 1458 aa26.73■■□□□ 1.87
ZC3HC1-211ENST00000484432 MROH2BQ7Z745 1585 aa26.7■■□□□ 1.86
ZC3HC1-211ENST00000484432 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
ZC3HC1-211ENST00000484432 PEG3Q9GZU2 1588 aa26.63■■□□□ 1.85
ZC3HC1-211ENST00000484432 HMGXB3Q12766 1538 aa26.57■■□□□ 1.84
ZC3HC1-211ENST00000484432 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
ZC3HC1-211ENST00000484432 RSF1Q96T23 1441 aaPredicted RBP26.44■■□□□ 1.82
ZC3HC1-211ENST00000484432 WIZO95785 1651 aa26.38■■□□□ 1.81
ZC3HC1-211ENST00000484432 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.77
ZC3HC1-211ENST00000484432 NESP48681 1621 aa26.01■■□□□ 1.75
ZC3HC1-211ENST00000484432 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
ZC3HC1-211ENST00000484432 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.74
ZC3HC1-211ENST00000484432 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
ZC3HC1-211ENST00000484432 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
ZC3HC1-211ENST00000484432 PDS5BQ9NTI5 1447 aa25.83■■□□□ 1.73
ZC3HC1-211ENST00000484432 CFTRP13569 1480 aa25.8■■□□□ 1.72
ZC3HC1-211ENST00000484432 SUPT5HO00267 1087 aaKnown RBP25.78■■□□□ 1.72
ZC3HC1-211ENST00000484432 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
ZC3HC1-211ENST00000484432 CUX2O14529 1486 aa25.63■■□□□ 1.69
ZC3HC1-211ENST00000484432 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
ZC3HC1-211ENST00000484432 THOC2Q8NI27 1593 aaKnown RBP25.6■■□□□ 1.69
ZC3HC1-211ENST00000484432 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
ZC3HC1-211ENST00000484432 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
ZC3HC1-211ENST00000484432 PRDM2Q13029 1718 aa25.51■■□□□ 1.68
ZC3HC1-211ENST00000484432 WDR62O43379 1518 aa25.45■■□□□ 1.66
ZC3HC1-211ENST00000484432 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
ZC3HC1-211ENST00000484432 ABCC8Q09428 1581 aa25.25■■□□□ 1.63
ZC3HC1-211ENST00000484432 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
ZC3HC1-211ENST00000484432 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
ZC3HC1-211ENST00000484432 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
ZC3HC1-211ENST00000484432 CUX1P39880 1505 aa25.04■■□□□ 1.6
ZC3HC1-211ENST00000484432 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
ZC3HC1-211ENST00000484432 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.58
ZC3HC1-211ENST00000484432 TARBP1Q13395 1621 aaKnown RBP24.93■■□□□ 1.58
ZC3HC1-211ENST00000484432 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
ZC3HC1-211ENST00000484432 SOGA1O94964 1423 aa24.92■■□□□ 1.58
ZC3HC1-211ENST00000484432 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
ZC3HC1-211ENST00000484432 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.57
ZC3HC1-211ENST00000484432 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
ZC3HC1-211ENST00000484432 SYNJ1O43426 1573 aa24.82■■□□□ 1.56
ZC3HC1-211ENST00000484432 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
ZC3HC1-211ENST00000484432 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
ZC3HC1-211ENST00000484432 DNAJC5Q9H3Z4 198 aa24.8■■□□□ 1.56
ZC3HC1-211ENST00000484432 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
ZC3HC1-211ENST00000484432 TDRD9Q8NDG6 1382 aaKnown RBP24.77■■□□□ 1.56
ZC3HC1-211ENST00000484432 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
ZC3HC1-211ENST00000484432 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
ZC3HC1-211ENST00000484432 GAPVD1Q14C86 1478 aa24.63■■□□□ 1.53
ZC3HC1-211ENST00000484432 GRIN2BQ13224 1484 aa24.62■■□□□ 1.53
ZC3HC1-211ENST00000484432 OSCARQ8IYS5 282 aa24.6■■□□□ 1.53
ZC3HC1-211ENST00000484432 ABCA5Q8WWZ7 1642 aa24.59■■□□□ 1.53
ZC3HC1-211ENST00000484432 SNAPC4Q5SXM2 1469 aa24.56■■□□□ 1.52
ZC3HC1-211ENST00000484432 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
ZC3HC1-211ENST00000484432 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
ZC3HC1-211ENST00000484432 FBLN2P98095 1184 aa24.49■■□□□ 1.51
ZC3HC1-211ENST00000484432 CHMP7Q8WUX9 453 aaPredicted RBP24.46■■□□□ 1.51
ZC3HC1-211ENST00000484432 SYNJ2O15056 1496 aa24.45■■□□□ 1.51
ZC3HC1-211ENST00000484432 CHD1O14646 1710 aa24.44■■□□□ 1.5
ZC3HC1-211ENST00000484432 ERICH3Q5RHP9 1530 aa24.43■■□□□ 1.5
ZC3HC1-211ENST00000484432 KIF27Q86VH2 1401 aa24.4■■□□□ 1.5
ZC3HC1-211ENST00000484432 TRIM41Q8WV44 630 aa24.38■■□□□ 1.49
ZC3HC1-211ENST00000484432 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
ZC3HC1-211ENST00000484432 ADAMTS12P58397 1594 aa24.35■■□□□ 1.49
ZC3HC1-211ENST00000484432 IGF1RP08069 1367 aa24.31■■□□□ 1.48
ZC3HC1-211ENST00000484432 GRIN2AQ12879 1464 aa24.29■■□□□ 1.48
ZC3HC1-211ENST00000484432 CLASP1Q7Z460 1538 aa24.24■■□□□ 1.47
ZC3HC1-211ENST00000484432 NUP160Q12769 1436 aa24.2■■□□□ 1.46
ZC3HC1-211ENST00000484432 CUL7Q14999 1698 aa24.19■■□□□ 1.46
ZC3HC1-211ENST00000484432 ARHGEF11O15085 1522 aa24.16■■□□□ 1.46
ZC3HC1-211ENST00000484432 RUSC2Q8N2Y8 1516 aa24.16■■□□□ 1.46
ZC3HC1-211ENST00000484432 CARMIL1Q5VZK9 1371 aa24.16■■□□□ 1.46
ZC3HC1-211ENST00000484432 CEP170Q5SW79 1584 aa24.15■■□□□ 1.46
ZC3HC1-211ENST00000484432 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
ZC3HC1-211ENST00000484432 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
ZC3HC1-211ENST00000484432 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
ZC3HC1-211ENST00000484432 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
ZC3HC1-211ENST00000484432 RAPGEF2Q9Y4G8 1499 aa24.01■■□□□ 1.43
ZC3HC1-211ENST00000484432 KIAA0586Q9BVV6 1533 aa23.99■■□□□ 1.43
ZC3HC1-211ENST00000484432 EEA1Q15075 1411 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms