RNA–Protein interactions for RNA: ENST00000472705.5

NEPRO-212, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 1,212 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-212ENST00000472705 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
NEPRO-212ENST00000472705 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
NEPRO-212ENST00000472705 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
NEPRO-212ENST00000472705 ABCC9O60706 1549 aa24.11■■□□□ 1.45
NEPRO-212ENST00000472705 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
NEPRO-212ENST00000472705 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
NEPRO-212ENST00000472705 CCDC180Q9P1Z9 1646 aa22.35■■□□□ 1.17
NEPRO-212ENST00000472705 PABPN1Q86U42 306 aaKnown RBP eCLIP22.29■■□□□ 1.16
NEPRO-212ENST00000472705 RB1CC1Q8TDY2 1594 aa22.08■■□□□ 1.13
NEPRO-212ENST00000472705 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
NEPRO-212ENST00000472705 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.09
NEPRO-212ENST00000472705 BICRAQ9NZM4 1560 aa21.67■■□□□ 1.06
NEPRO-212ENST00000472705 CC2D2AQ9P2K1 1620 aa21.63■■□□□ 1.05
NEPRO-212ENST00000472705 UNC13AQ9UPW8 1703 aa21.63■■□□□ 1.05
NEPRO-212ENST00000472705 NACADO15069 1562 aa21.56■■□□□ 1.04
NEPRO-212ENST00000472705 TRIM41Q8WV44 630 aa21.54■■□□□ 1.04
NEPRO-212ENST00000472705 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
NEPRO-212ENST00000472705 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
NEPRO-212ENST00000472705 CUX2O14529 1486 aa21.28■■□□□ 1
NEPRO-212ENST00000472705 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
NEPRO-212ENST00000472705 SHROOM4Q9ULL8 1493 aa20.97■□□□□ 0.95
NEPRO-212ENST00000472705 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
NEPRO-212ENST00000472705 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
NEPRO-212ENST00000472705 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
NEPRO-212ENST00000472705 FOXD1Q16676 465 aa20.34■□□□□ 0.85
NEPRO-212ENST00000472705 NESP48681 1621 aa20.32■□□□□ 0.84
NEPRO-212ENST00000472705 THOC2Q8NI27 1593 aaKnown RBP20.3■□□□□ 0.84
NEPRO-212ENST00000472705 ILDR1Q86SU0 546 aaPredicted RBP20.15■□□□□ 0.82
NEPRO-212ENST00000472705 OSCARQ8IYS5 282 aa20.11■□□□□ 0.81
NEPRO-212ENST00000472705 TRHP20396 242 aaPredicted RBP20.06■□□□□ 0.8
NEPRO-212ENST00000472705 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
NEPRO-212ENST00000472705 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
NEPRO-212ENST00000472705 RIMBP3CA6NJZ7 1639 aa20.03■□□□□ 0.8
NEPRO-212ENST00000472705 RIMBP3BA6NNM3 1639 aa20.03■□□□□ 0.8
NEPRO-212ENST00000472705 RIMBP3Q9UFD9 1639 aa20.03■□□□□ 0.8
NEPRO-212ENST00000472705 NCAPD3P42695 1498 aa20.02■□□□□ 0.8
NEPRO-212ENST00000472705 DCAF1Q9Y4B6 1507 aa19.92■□□□□ 0.78
NEPRO-212ENST00000472705 KIF21AQ7Z4S6 1674 aa19.86■□□□□ 0.77
NEPRO-212ENST00000472705 ZCCHC6Q5VYS8 1495 aaKnown RBP19.84■□□□□ 0.77
NEPRO-212ENST00000472705 CYB5RLQ6IPT4 315 aa19.83■□□□□ 0.77
NEPRO-212ENST00000472705 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
NEPRO-212ENST00000472705 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
NEPRO-212ENST00000472705 LAMC3Q9Y6N6 1575 aa19.71■□□□□ 0.75
NEPRO-212ENST00000472705 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
NEPRO-212ENST00000472705 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
NEPRO-212ENST00000472705 WDR62O43379 1518 aa19.65■□□□□ 0.74
NEPRO-212ENST00000472705 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
NEPRO-212ENST00000472705 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
NEPRO-212ENST00000472705 BAZ1BQ9UIG0 1483 aaKnown RBP19.42■□□□□ 0.7
NEPRO-212ENST00000472705 CADPSQ9ULU8 1353 aa19.34■□□□□ 0.69
NEPRO-212ENST00000472705 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.68
NEPRO-212ENST00000472705 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
NEPRO-212ENST00000472705 CEP164Q9UPV0 1460 aa19.23■□□□□ 0.67
NEPRO-212ENST00000472705 KDM4FA0A1W2PPD8 638 aa19.18■□□□□ 0.66
NEPRO-212ENST00000472705 MSH5O43196 834 aa19.18■□□□□ 0.66
NEPRO-212ENST00000472705 ZNF608Q9ULD9 1512 aaPredicted RBP19.18■□□□□ 0.66
NEPRO-212ENST00000472705 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
NEPRO-212ENST00000472705 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
NEPRO-212ENST00000472705 URB2Q14146 1524 aaKnown RBP19.13■□□□□ 0.65
NEPRO-212ENST00000472705 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
NEPRO-212ENST00000472705 POTEDQ86YR6 584 aa19.06■□□□□ 0.64
NEPRO-212ENST00000472705 PIAS4Q8N2W9 510 aaPredicted RBP19.01■□□□□ 0.63
NEPRO-212ENST00000472705 CHD1O14646 1710 aa19■□□□□ 0.63
NEPRO-212ENST00000472705 FBLN2P98095 1184 aa18.94■□□□□ 0.62
NEPRO-212ENST00000472705 FBXO41Q8TF61 875 aa18.93■□□□□ 0.62
NEPRO-212ENST00000472705 LMTK3Q96Q04 1460 aa18.92■□□□□ 0.62
NEPRO-212ENST00000472705 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
NEPRO-212ENST00000472705 EIF4G3O43432 1585 aaKnown RBP18.87■□□□□ 0.61
NEPRO-212ENST00000472705 SOCS7O14512 581 aa18.86■□□□□ 0.61
NEPRO-212ENST00000472705 ILDR2Q71H61 639 aa18.86■□□□□ 0.61
NEPRO-212ENST00000472705 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.6
NEPRO-212ENST00000472705 MROH2BQ7Z745 1585 aa18.82■□□□□ 0.6
NEPRO-212ENST00000472705 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
NEPRO-212ENST00000472705 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
NEPRO-212ENST00000472705 AQRO60306 1485 aaKnown RBP eCLIP18.8■□□□□ 0.6
NEPRO-212ENST00000472705 CFTRP13569 1480 aa18.79■□□□□ 0.6
NEPRO-212ENST00000472705 ADRA2BP18089 450 aa18.78■□□□□ 0.6
NEPRO-212ENST00000472705 HECW2Q9P2P5 1572 aa18.77■□□□□ 0.6
NEPRO-212ENST00000472705 GAPVD1Q14C86 1478 aa18.74■□□□□ 0.59
NEPRO-212ENST00000472705 KIF13AQ9H1H9 1805 aa18.67■□□□□ 0.58
NEPRO-212ENST00000472705 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
NEPRO-212ENST00000472705 SYNJ2O15056 1496 aa18.58■□□□□ 0.56
NEPRO-212ENST00000472705 ADGRL1O94910 1474 aa18.54■□□□□ 0.56
NEPRO-212ENST00000472705 TARBP1Q13395 1621 aaKnown RBP18.54■□□□□ 0.56
NEPRO-212ENST00000472705 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
NEPRO-212ENST00000472705 DISP3Q9P2K9 1392 aa18.51■□□□□ 0.55
NEPRO-212ENST00000472705 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
NEPRO-212ENST00000472705 SNAPC4Q5SXM2 1469 aa18.5■□□□□ 0.55
NEPRO-212ENST00000472705 FAM69CQ0P6D2 419 aa18.48■□□□□ 0.55
NEPRO-212ENST00000472705 KDM6BO15054 1643 aa18.48■□□□□ 0.55
NEPRO-212ENST00000472705 WIZO95785 1651 aa18.47■□□□□ 0.55
NEPRO-212ENST00000472705 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
NEPRO-212ENST00000472705 ABCC10Q5T3U5 1492 aa18.39■□□□□ 0.53
NEPRO-212ENST00000472705 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
NEPRO-212ENST00000472705 DNMBPQ6XZF7 1577 aa18.32■□□□□ 0.52
NEPRO-212ENST00000472705 POLA1P09884 1462 aaPredicted RBP18.32■□□□□ 0.52
NEPRO-212ENST00000472705 MAGI1Q96QZ7 1491 aaPredicted RBP18.29■□□□□ 0.52
NEPRO-212ENST00000472705 ABCC8Q09428 1581 aa18.29■□□□□ 0.52
NEPRO-212ENST00000472705 PRDM2Q13029 1718 aa18.27■□□□□ 0.52
NEPRO-212ENST00000472705 DIP2BQ9P265 1576 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms