RNA–Protein interactions for RNA: ENST00000481503.5

ZC3HC1-209, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 5 BASIC

Gene ZC3HC1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-209ENST00000481503 NISCHQ9Y2I1 1504 aa28.01■■■□□ 2.07
ZC3HC1-209ENST00000481503 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
ZC3HC1-209ENST00000481503 ABCC9O60706 1549 aa23.56■■□□□ 1.36
ZC3HC1-209ENST00000481503 ZCCHC6Q5VYS8 1495 aaKnown RBP23.45■■□□□ 1.35
ZC3HC1-209ENST00000481503 DCAF8L2P0C7V8 631 aa23.23■■□□□ 1.31
ZC3HC1-209ENST00000481503 DCAF1Q9Y4B6 1507 aa23.2■■□□□ 1.3
ZC3HC1-209ENST00000481503 MYO15BQ96JP2 1530 aa23.07■■□□□ 1.28
ZC3HC1-209ENST00000481503 NACADO15069 1562 aa23.05■■□□□ 1.28
ZC3HC1-209ENST00000481503 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
ZC3HC1-209ENST00000481503 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
ZC3HC1-209ENST00000481503 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
ZC3HC1-209ENST00000481503 UNC13AQ9UPW8 1703 aa22.44■■□□□ 1.18
ZC3HC1-209ENST00000481503 BICRAQ9NZM4 1560 aa22.18■■□□□ 1.14
ZC3HC1-209ENST00000481503 PABPN1Q86U42 306 aaKnown RBP eCLIP22.11■■□□□ 1.13
ZC3HC1-209ENST00000481503 CECR2Q9BXF3 1484 aa21.74■■□□□ 1.07
ZC3HC1-209ENST00000481503 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
ZC3HC1-209ENST00000481503 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
ZC3HC1-209ENST00000481503 MROH2BQ7Z745 1585 aa21.59■■□□□ 1.05
ZC3HC1-209ENST00000481503 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
ZC3HC1-209ENST00000481503 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
ZC3HC1-209ENST00000481503 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
ZC3HC1-209ENST00000481503 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
ZC3HC1-209ENST00000481503 WIZO95785 1651 aa21.42■■□□□ 1.02
ZC3HC1-209ENST00000481503 PEG3Q9GZU2 1588 aa21.38■■□□□ 1.01
ZC3HC1-209ENST00000481503 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
ZC3HC1-209ENST00000481503 CC2D2AQ9P2K1 1620 aa21.35■■□□□ 1.01
ZC3HC1-209ENST00000481503 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1.01
ZC3HC1-209ENST00000481503 BAZ1BQ9UIG0 1483 aaKnown RBP21.23■□□□□ 0.99
ZC3HC1-209ENST00000481503 NCAPD3P42695 1498 aa21.22■□□□□ 0.99
ZC3HC1-209ENST00000481503 TOP2AP11388 1531 aaKnown RBP21.22■□□□□ 0.99
ZC3HC1-209ENST00000481503 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
ZC3HC1-209ENST00000481503 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.94
ZC3HC1-209ENST00000481503 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
ZC3HC1-209ENST00000481503 CFTRP13569 1480 aa20.65■□□□□ 0.9
ZC3HC1-209ENST00000481503 PRDM2Q13029 1718 aa20.62■□□□□ 0.89
ZC3HC1-209ENST00000481503 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
ZC3HC1-209ENST00000481503 NESP48681 1621 aa20.55■□□□□ 0.88
ZC3HC1-209ENST00000481503 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.87
ZC3HC1-209ENST00000481503 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
ZC3HC1-209ENST00000481503 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
ZC3HC1-209ENST00000481503 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
ZC3HC1-209ENST00000481503 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
ZC3HC1-209ENST00000481503 KIF21AQ7Z4S6 1674 aa20.37■□□□□ 0.85
ZC3HC1-209ENST00000481503 WRNQ14191 1432 aaPredicted RBP eCLIP20.34■□□□□ 0.85
ZC3HC1-209ENST00000481503 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
ZC3HC1-209ENST00000481503 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
ZC3HC1-209ENST00000481503 SYNJ1O43426 1573 aa20.24■□□□□ 0.83
ZC3HC1-209ENST00000481503 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
ZC3HC1-209ENST00000481503 TOP2BQ02880 1626 aa20.23■□□□□ 0.83
ZC3HC1-209ENST00000481503 CUX1P39880 1505 aa20.23■□□□□ 0.83
ZC3HC1-209ENST00000481503 DNMBPQ6XZF7 1577 aa20.21■□□□□ 0.83
ZC3HC1-209ENST00000481503 MRC2Q9UBG0 1479 aa20.2■□□□□ 0.82
ZC3HC1-209ENST00000481503 URB2Q14146 1524 aaKnown RBP20.17■□□□□ 0.82
ZC3HC1-209ENST00000481503 TOPBP1Q92547 1522 aa20.16■□□□□ 0.82
ZC3HC1-209ENST00000481503 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
ZC3HC1-209ENST00000481503 WDR62O43379 1518 aa20.1■□□□□ 0.81
ZC3HC1-209ENST00000481503 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
ZC3HC1-209ENST00000481503 DNAJC5Q9H3Z4 198 aa20.04■□□□□ 0.8
ZC3HC1-209ENST00000481503 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
ZC3HC1-209ENST00000481503 SOGA1O94964 1423 aa19.97■□□□□ 0.79
ZC3HC1-209ENST00000481503 RAD54L2Q9Y4B4 1467 aa19.93■□□□□ 0.78
ZC3HC1-209ENST00000481503 CUX2O14529 1486 aa19.92■□□□□ 0.78
ZC3HC1-209ENST00000481503 ABCA10Q8WWZ4 1543 aa19.9■□□□□ 0.78
ZC3HC1-209ENST00000481503 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
ZC3HC1-209ENST00000481503 EEA1Q15075 1411 aa19.9■□□□□ 0.78
ZC3HC1-209ENST00000481503 TARBP1Q13395 1621 aaKnown RBP19.9■□□□□ 0.78
ZC3HC1-209ENST00000481503 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
ZC3HC1-209ENST00000481503 KIF27Q86VH2 1401 aa19.87■□□□□ 0.77
ZC3HC1-209ENST00000481503 FAM9AQ8IZU1 332 aaPredicted RBP19.87■□□□□ 0.77
ZC3HC1-209ENST00000481503 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
ZC3HC1-209ENST00000481503 ABCA5Q8WWZ7 1642 aa19.78■□□□□ 0.76
ZC3HC1-209ENST00000481503 TDRD9Q8NDG6 1382 aaKnown RBP19.77■□□□□ 0.76
ZC3HC1-209ENST00000481503 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.76
ZC3HC1-209ENST00000481503 GAPVD1Q14C86 1478 aa19.76■□□□□ 0.75
ZC3HC1-209ENST00000481503 ZNF608Q9ULD9 1512 aaPredicted RBP19.74■□□□□ 0.75
ZC3HC1-209ENST00000481503 EIF4G3O43432 1585 aaKnown RBP19.72■□□□□ 0.75
ZC3HC1-209ENST00000481503 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
ZC3HC1-209ENST00000481503 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.753e-6■■■□□ 16.9
ZC3HC1-209ENST00000481503 ERICH3Q5RHP9 1530 aa19.69■□□□□ 0.74
ZC3HC1-209ENST00000481503 IGF1RP08069 1367 aa19.68■□□□□ 0.74
ZC3HC1-209ENST00000481503 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
ZC3HC1-209ENST00000481503 CUL7Q14999 1698 aa19.66■□□□□ 0.74
ZC3HC1-209ENST00000481503 KIF21BO75037 1637 aa19.64■□□□□ 0.73
ZC3HC1-209ENST00000481503 CARMIL1Q5VZK9 1371 aa19.61■□□□□ 0.73
ZC3HC1-209ENST00000481503 PRXQ9BXM0 1461 aa19.61■□□□□ 0.73
ZC3HC1-209ENST00000481503 GOLGA3Q08378 1498 aa19.58■□□□□ 0.73
ZC3HC1-209ENST00000481503 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
ZC3HC1-209ENST00000481503 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
ZC3HC1-209ENST00000481503 RAPGEF2Q9Y4G8 1499 aa19.56■□□□□ 0.72
ZC3HC1-209ENST00000481503 LOC105371045A0A1W2PR82 267 aa19.56■□□□□ 0.72
ZC3HC1-209ENST00000481503 MAGI1Q96QZ7 1491 aaPredicted RBP19.56■□□□□ 0.72
ZC3HC1-209ENST00000481503 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
ZC3HC1-209ENST00000481503 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
ZC3HC1-209ENST00000481503 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
ZC3HC1-209ENST00000481503 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
ZC3HC1-209ENST00000481503 CHMP7Q8WUX9 453 aaPredicted RBP19.45■□□□□ 0.7
ZC3HC1-209ENST00000481503 TNIKQ9UKE5 1360 aa19.42■□□□□ 0.7
ZC3HC1-209ENST00000481503 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
ZC3HC1-209ENST00000481503 FBLN2P98095 1184 aa19.41■□□□□ 0.7
ZC3HC1-209ENST00000481503 CTTNBP2Q8WZ74 1663 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms