RNA–Protein interactions for RNA: ENST00000314400.9

NEPRO-201, Transcript of nucleolus and neural progenitor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEPRO, Length 4,992 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-201ENST00000314400 DCAF8L2P0C7V8 631 aa20.38■□□□□ 0.85
NEPRO-201ENST00000314400 NISCHQ9Y2I1 1504 aa19.53■□□□□ 0.72
NEPRO-201ENST00000314400 SUPT5HO00267 1087 aaKnown RBP19.43■□□□□ 0.7
NEPRO-201ENST00000314400 SHROOM4Q9ULL8 1493 aa18.94■□□□□ 0.62
NEPRO-201ENST00000314400 PELP1Q8IZL8 1130 aaKnown RBP18.9■□□□□ 0.62
NEPRO-201ENST00000314400 APLP2Q06481 763 aa18.74■□□□□ 0.59
NEPRO-201ENST00000314400 EHMT2Q96KQ7 1210 aa18.59■□□□□ 0.57
NEPRO-201ENST00000314400 FAM9AQ8IZU1 332 aaPredicted RBP18.51■□□□□ 0.55
NEPRO-201ENST00000314400 ZEB1P37275 1124 aaPredicted RBP18.25■□□□□ 0.51
NEPRO-201ENST00000314400 PCGF6Q9BYE7 350 aa18.2■□□□□ 0.5
NEPRO-201ENST00000314400 CENPBP07199 599 aaPredicted RBP18.16■□□□□ 0.5
NEPRO-201ENST00000314400 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
NEPRO-201ENST00000314400 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
NEPRO-201ENST00000314400 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
NEPRO-201ENST00000314400 ERICH6Q7L0X2 663 aa17.92■□□□□ 0.46
NEPRO-201ENST00000314400 UBTFP17480 764 aaKnown RBP17.9■□□□□ 0.46
NEPRO-201ENST00000314400 RANGAP1P46060 587 aaPredicted RBP17.87■□□□□ 0.45
NEPRO-201ENST00000314400 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
NEPRO-201ENST00000314400 NEFLP07196 543 aa17.77■□□□□ 0.43
NEPRO-201ENST00000314400 MYT1Q01538 1121 aa17.63■□□□□ 0.41
NEPRO-201ENST00000314400 TRIM26Q12899 539 aaPredicted RBP17.58■□□□□ 0.41
NEPRO-201ENST00000314400 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
NEPRO-201ENST00000314400 HRCP23327 699 aa17.33■□□□□ 0.37
NEPRO-201ENST00000314400 PPARGC1BQ86YN6 1023 aaKnown RBP17.33■□□□□ 0.36
NEPRO-201ENST00000314400 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
NEPRO-201ENST00000314400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
NEPRO-201ENST00000314400 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
NEPRO-201ENST00000314400 DAXXQ9UER7 740 aaPredicted RBP17.24■□□□□ 0.35
NEPRO-201ENST00000314400 ITGAEP38570 1179 aa17.22■□□□□ 0.35
NEPRO-201ENST00000314400 MYT1LQ9UL68 1186 aa17.2■□□□□ 0.34
NEPRO-201ENST00000314400 LOC105371045A0A1W2PR82 267 aa17.14■□□□□ 0.33
NEPRO-201ENST00000314400 POLR3GLQ9BT43 218 aa17.12■□□□□ 0.33
NEPRO-201ENST00000314400 DIEXFQ68CQ4 756 aaKnown RBP16.93■□□□□ 0.3
NEPRO-201ENST00000314400 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
NEPRO-201ENST00000314400 RTL5Q5HYW3 569 aaPredicted RBP16.84■□□□□ 0.29
NEPRO-201ENST00000314400 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
NEPRO-201ENST00000314400 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
NEPRO-201ENST00000314400 CLSPNQ9HAW4 1339 aa16.81■□□□□ 0.28
NEPRO-201ENST00000314400 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
NEPRO-201ENST00000314400 ZNF316A6NFI3 1004 aaPredicted RBP16.8■□□□□ 0.28
NEPRO-201ENST00000314400 ANP32CO43423 234 aa16.7■□□□□ 0.26
NEPRO-201ENST00000314400 ABCC9O60706 1549 aa16.7■□□□□ 0.26
NEPRO-201ENST00000314400 NEUROD1Q13562 356 aa16.67■□□□□ 0.26
NEPRO-201ENST00000314400 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
NEPRO-201ENST00000314400 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.25
NEPRO-201ENST00000314400 CDK11AQ9UQ88 783 aaPredicted RBP16.57■□□□□ 0.24
NEPRO-201ENST00000314400 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
NEPRO-201ENST00000314400 ZNF326Q5BKZ1 582 aaKnown RBP16.54■□□□□ 0.24
NEPRO-201ENST00000314400 GTF3C3Q9Y5Q9 886 aa16.5■□□□□ 0.23
NEPRO-201ENST00000314400 NEFMP07197 916 aa16.48■□□□□ 0.23
NEPRO-201ENST00000314400 FBLN2P98095 1184 aa16.46■□□□□ 0.23
NEPRO-201ENST00000314400 BCANQ96GW7 911 aa16.43■□□□□ 0.22
NEPRO-201ENST00000314400 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
NEPRO-201ENST00000314400 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
NEPRO-201ENST00000314400 P3H3Q8IVL6 736 aa16.33■□□□□ 0.2
NEPRO-201ENST00000314400 ANP32AP39687 249 aaKnown RBP16.32■□□□□ 0.2
NEPRO-201ENST00000314400 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
NEPRO-201ENST00000314400 ZNF777Q9ULD5 760 aaPredicted RBP16.27■□□□□ 0.19
NEPRO-201ENST00000314400 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
NEPRO-201ENST00000314400 SLC24A1O60721 1099 aa16.22■□□□□ 0.19
NEPRO-201ENST00000314400 ARID3CA6NKF2 412 aa16.2■□□□□ 0.18
NEPRO-201ENST00000314400 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
NEPRO-201ENST00000314400 SCRIBQ14160 1630 aa16.17■□□□□ 0.18
NEPRO-201ENST00000314400 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
NEPRO-201ENST00000314400 UPF2Q9HAU5 1272 aaKnown RBP16.13■□□□□ 0.17
NEPRO-201ENST00000314400 NPM1P06748 294 aaKnown RBP eCLIP16.12■□□□□ 0.17
NEPRO-201ENST00000314400 HNRNPUQ00839 825 aaKnown RBP eCLIP16.1■□□□□ 0.17
NEPRO-201ENST00000314400 ANP32BQ92688 251 aaKnown RBP16.1■□□□□ 0.17
NEPRO-201ENST00000314400 FKBP8Q14318 412 aa16.08■□□□□ 0.17
NEPRO-201ENST00000314400 BCL11AQ9H165 835 aa16.08■□□□□ 0.17
NEPRO-201ENST00000314400 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.17
NEPRO-201ENST00000314400 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.16
NEPRO-201ENST00000314400 DDX10Q13206 875 aaKnown RBP16.06■□□□□ 0.16
NEPRO-201ENST00000314400 TSPY4P0CV99 314 aa16.05■□□□□ 0.16
NEPRO-201ENST00000314400 TSPY10P0CW01 314 aa16.05■□□□□ 0.16
NEPRO-201ENST00000314400 CHGAP10645 457 aaKnown RBP16.05■□□□□ 0.16
NEPRO-201ENST00000314400 HSP90AA1P07900 732 aaKnown RBP16.05■□□□□ 0.16
NEPRO-201ENST00000314400 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
NEPRO-201ENST00000314400 TMC1Q8TDI8 760 aa16.04■□□□□ 0.16
NEPRO-201ENST00000314400 FAM9BQ8IZU0 186 aa16.02■□□□□ 0.15
NEPRO-201ENST00000314400 MTUS2Q5JR59 1369 aa16.01■□□□□ 0.15
NEPRO-201ENST00000314400 EEA1Q15075 1411 aa15.98■□□□□ 0.15
NEPRO-201ENST00000314400 CCDC136Q96JN2 1154 aa15.98■□□□□ 0.15
NEPRO-201ENST00000314400 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
NEPRO-201ENST00000314400 CLIP1P30622 1438 aa15.95■□□□□ 0.14
NEPRO-201ENST00000314400 CHIC2Q9UKJ5 165 aa15.94■□□□□ 0.14
NEPRO-201ENST00000314400 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
NEPRO-201ENST00000314400 EIF4G2P78344 907 aaKnown RBP eCLIP15.9■□□□□ 0.14
NEPRO-201ENST00000314400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
NEPRO-201ENST00000314400 RSF1Q96T23 1441 aaPredicted RBP15.9■□□□□ 0.14
NEPRO-201ENST00000314400 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
NEPRO-201ENST00000314400 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
NEPRO-201ENST00000314400 SALL2Q9Y467 1007 aaPredicted RBP15.85■□□□□ 0.13
NEPRO-201ENST00000314400 GOLGA3Q08378 1498 aa15.83■□□□□ 0.13
NEPRO-201ENST00000314400 KDM2AQ9Y2K7 1162 aa15.83■□□□□ 0.12
NEPRO-201ENST00000314400 MYH16Q9H6N6 1097 aa15.82■□□□□ 0.12
NEPRO-201ENST00000314400 CDCA8Q53HL2 280 aa15.79■□□□□ 0.12
NEPRO-201ENST00000314400 PLEKHD1A6NEE1 506 aa15.79■□□□□ 0.12
NEPRO-201ENST00000314400 EIF5BO60841 1220 aaKnown RBP15.77■□□□□ 0.11
NEPRO-201ENST00000314400 GLIPR1L2Q4G1C9 344 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms