RNA–Protein interactions for RNA: ENST00000469809.5

NEPRO-208, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 3

Gene NEPRO, Length 1,512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-208ENST00000469809 NISCHQ9Y2I1 1504 aa28.58■■■□□ 2.17
NEPRO-208ENST00000469809 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
NEPRO-208ENST00000469809 ABCC9O60706 1549 aa24.1■■□□□ 1.45
NEPRO-208ENST00000469809 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
NEPRO-208ENST00000469809 DCAF8L2P0C7V8 631 aa23.71■■□□□ 1.39
NEPRO-208ENST00000469809 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
NEPRO-208ENST00000469809 MYO15BQ96JP2 1530 aa23.53■■□□□ 1.36
NEPRO-208ENST00000469809 NACADO15069 1562 aa23.52■■□□□ 1.36
NEPRO-208ENST00000469809 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
NEPRO-208ENST00000469809 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
NEPRO-208ENST00000469809 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
NEPRO-208ENST00000469809 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
NEPRO-208ENST00000469809 BICRAQ9NZM4 1560 aa22.65■■□□□ 1.22
NEPRO-208ENST00000469809 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
NEPRO-208ENST00000469809 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
NEPRO-208ENST00000469809 CECR2Q9BXF3 1484 aa22.19■■□□□ 1.14
NEPRO-208ENST00000469809 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
NEPRO-208ENST00000469809 SMARCA4P51532 1647 aa22.08■■□□□ 1.13
NEPRO-208ENST00000469809 EIF4G1Q04637 1599 aaKnown RBP22.05■■□□□ 1.12
NEPRO-208ENST00000469809 MROH2BQ7Z745 1585 aa22.04■■□□□ 1.12
NEPRO-208ENST00000469809 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
NEPRO-208ENST00000469809 SUPT5HO00267 1087 aaKnown RBP21.93■■□□□ 1.1
NEPRO-208ENST00000469809 WIZO95785 1651 aa21.86■■□□□ 1.09
NEPRO-208ENST00000469809 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
NEPRO-208ENST00000469809 CC2D2AQ9P2K1 1620 aa21.82■■□□□ 1.08
NEPRO-208ENST00000469809 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
NEPRO-208ENST00000469809 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
NEPRO-208ENST00000469809 BAZ1BQ9UIG0 1483 aaKnown RBP21.68■■□□□ 1.06
NEPRO-208ENST00000469809 NCAPD3P42695 1498 aa21.67■■□□□ 1.06
NEPRO-208ENST00000469809 TOP2AP11388 1531 aaKnown RBP21.66■■□□□ 1.06
NEPRO-208ENST00000469809 HMGXB3Q12766 1538 aa21.66■■□□□ 1.06
NEPRO-208ENST00000469809 DNAJC5BQ9UF47 199 aa21.5■■□□□ 1.03
NEPRO-208ENST00000469809 CCDC88BA6NC98 1476 aa21.38■■□□□ 1.01
NEPRO-208ENST00000469809 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
NEPRO-208ENST00000469809 CADPSQ9ULU8 1353 aa21.09■□□□□ 0.97
NEPRO-208ENST00000469809 CFTRP13569 1480 aa21.08■□□□□ 0.97
NEPRO-208ENST00000469809 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
NEPRO-208ENST00000469809 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
NEPRO-208ENST00000469809 NESP48681 1621 aa21■□□□□ 0.95
NEPRO-208ENST00000469809 PDS5BQ9NTI5 1447 aa20.89■□□□□ 0.93
NEPRO-208ENST00000469809 FANCD2Q9BXW9 1451 aa20.87■□□□□ 0.93
NEPRO-208ENST00000469809 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
NEPRO-208ENST00000469809 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
NEPRO-208ENST00000469809 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
NEPRO-208ENST00000469809 ERCC6Q03468 1493 aa20.76■□□□□ 0.91
NEPRO-208ENST00000469809 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
NEPRO-208ENST00000469809 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
NEPRO-208ENST00000469809 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
NEPRO-208ENST00000469809 CUX1P39880 1505 aa20.65■□□□□ 0.9
NEPRO-208ENST00000469809 TOP2BQ02880 1626 aa20.64■□□□□ 0.9
NEPRO-208ENST00000469809 MRC2Q9UBG0 1479 aa20.64■□□□□ 0.89
NEPRO-208ENST00000469809 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.89
NEPRO-208ENST00000469809 DNMBPQ6XZF7 1577 aa20.64■□□□□ 0.89
NEPRO-208ENST00000469809 URB2Q14146 1524 aaKnown RBP20.61■□□□□ 0.89
NEPRO-208ENST00000469809 TOPBP1Q92547 1522 aa20.59■□□□□ 0.89
NEPRO-208ENST00000469809 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.88
NEPRO-208ENST00000469809 WDR62O43379 1518 aa20.54■□□□□ 0.88
NEPRO-208ENST00000469809 FGD5Q6ZNL6 1462 aa20.51■□□□□ 0.87
NEPRO-208ENST00000469809 POLA1P09884 1462 aaPredicted RBP20.46■□□□□ 0.87
NEPRO-208ENST00000469809 SOGA1O94964 1423 aa20.38■□□□□ 0.85
NEPRO-208ENST00000469809 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
NEPRO-208ENST00000469809 CUX2O14529 1486 aa20.34■□□□□ 0.85
NEPRO-208ENST00000469809 IFT140Q96RY7 1462 aa20.33■□□□□ 0.84
NEPRO-208ENST00000469809 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
NEPRO-208ENST00000469809 WDR97A6NE52 1622 aa20.32■□□□□ 0.84
NEPRO-208ENST00000469809 TARBP1Q13395 1621 aaKnown RBP20.32■□□□□ 0.84
NEPRO-208ENST00000469809 EEA1Q15075 1411 aa20.27■□□□□ 0.84
NEPRO-208ENST00000469809 KIF27Q86VH2 1401 aa20.27■□□□□ 0.84
NEPRO-208ENST00000469809 FAM9AQ8IZU1 332 aaPredicted RBP20.26■□□□□ 0.83
NEPRO-208ENST00000469809 RUSC2Q8N2Y8 1516 aa20.24■□□□□ 0.83
NEPRO-208ENST00000469809 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
NEPRO-208ENST00000469809 TDRD9Q8NDG6 1382 aaKnown RBP20.2■□□□□ 0.82
NEPRO-208ENST00000469809 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
NEPRO-208ENST00000469809 GAPVD1Q14C86 1478 aa20.17■□□□□ 0.82
NEPRO-208ENST00000469809 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
NEPRO-208ENST00000469809 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.81
NEPRO-208ENST00000469809 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
NEPRO-208ENST00000469809 PBRM1Q86U86 1689 aa20.12■□□□□ 0.81
NEPRO-208ENST00000469809 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
NEPRO-208ENST00000469809 GRIN2BQ13224 1484 aa20.08■□□□□ 0.81
NEPRO-208ENST00000469809 IGF1RP08069 1367 aa20.06■□□□□ 0.8
NEPRO-208ENST00000469809 CUL7Q14999 1698 aa20.06■□□□□ 0.8
NEPRO-208ENST00000469809 KIF21BO75037 1637 aa20.02■□□□□ 0.8
NEPRO-208ENST00000469809 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
NEPRO-208ENST00000469809 PRXQ9BXM0 1461 aa20■□□□□ 0.79
NEPRO-208ENST00000469809 CARMIL1Q5VZK9 1371 aa19.99■□□□□ 0.79
NEPRO-208ENST00000469809 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
NEPRO-208ENST00000469809 ADAMTS12P58397 1594 aa19.98■□□□□ 0.79
NEPRO-208ENST00000469809 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
NEPRO-208ENST00000469809 GOLGA3Q08378 1498 aa19.97■□□□□ 0.79
NEPRO-208ENST00000469809 RAPGEF2Q9Y4G8 1499 aa19.96■□□□□ 0.79
NEPRO-208ENST00000469809 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
NEPRO-208ENST00000469809 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
NEPRO-208ENST00000469809 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
NEPRO-208ENST00000469809 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
NEPRO-208ENST00000469809 FBLN2P98095 1184 aa19.84■□□□□ 0.77
NEPRO-208ENST00000469809 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
NEPRO-208ENST00000469809 GRIN2AQ12879 1464 aa19.83■□□□□ 0.77
NEPRO-208ENST00000469809 CHD1O14646 1710 aa19.8■□□□□ 0.76
NEPRO-208ENST00000469809 TNIKQ9UKE5 1360 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms