RNA–Protein interactions for RNA: ENST00000470663.1

NEPRO-209, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-209ENST00000470663 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
NEPRO-209ENST00000470663 CCDC180Q9P1Z9 1646 aa34.5■■■■□ 3.11
NEPRO-209ENST00000470663 ABCC9O60706 1549 aa34.35■■■■□ 3.09
NEPRO-209ENST00000470663 RB1CC1Q8TDY2 1594 aa32.76■■■□□ 2.84
NEPRO-209ENST00000470663 NACADO15069 1562 aa32.58■■■□□ 2.81
NEPRO-209ENST00000470663 DCAF8L2P0C7V8 631 aa32.54■■■□□ 2.8
NEPRO-209ENST00000470663 MYO15BQ96JP2 1530 aa32.18■■■□□ 2.74
NEPRO-209ENST00000470663 DNAJC5BQ9UF47 199 aa32.09■■■□□ 2.73
NEPRO-209ENST00000470663 UNC13AQ9UPW8 1703 aa32.06■■■□□ 2.72
NEPRO-209ENST00000470663 PABPN1Q86U42 306 aaKnown RBP eCLIP32.04■■■□□ 2.72
NEPRO-209ENST00000470663 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
NEPRO-209ENST00000470663 DCAF1Q9Y4B6 1507 aa31.85■■■□□ 2.69
NEPRO-209ENST00000470663 BICRAQ9NZM4 1560 aa31.81■■■□□ 2.68
NEPRO-209ENST00000470663 SCRIBQ14160 1630 aa31.47■■■□□ 2.63
NEPRO-209ENST00000470663 SHROOM4Q9ULL8 1493 aa31.34■■■□□ 2.61
NEPRO-209ENST00000470663 CC2D2AQ9P2K1 1620 aa31.04■■■□□ 2.56
NEPRO-209ENST00000470663 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
NEPRO-209ENST00000470663 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
NEPRO-209ENST00000470663 NCAPD3P42695 1498 aa30.09■■■□□ 2.41
NEPRO-209ENST00000470663 SMARCA4P51532 1647 aa30.04■■■□□ 2.4
NEPRO-209ENST00000470663 ATAD2BQ9ULI0 1458 aa30.02■■■□□ 2.4
NEPRO-209ENST00000470663 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
NEPRO-209ENST00000470663 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
NEPRO-209ENST00000470663 HMGXB3Q12766 1538 aa29.86■■■□□ 2.37
NEPRO-209ENST00000470663 BAZ1BQ9UIG0 1483 aaKnown RBP29.74■■■□□ 2.35
NEPRO-209ENST00000470663 MROH2BQ7Z745 1585 aa29.73■■■□□ 2.35
NEPRO-209ENST00000470663 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
NEPRO-209ENST00000470663 ERCC6Q03468 1493 aa29.62■■■□□ 2.33
NEPRO-209ENST00000470663 NESP48681 1621 aa29.56■■■□□ 2.32
NEPRO-209ENST00000470663 CUX2O14529 1486 aa29.49■■■□□ 2.31
NEPRO-209ENST00000470663 WIZO95785 1651 aa29.39■■■□□ 2.3
NEPRO-209ENST00000470663 LAMC3Q9Y6N6 1575 aa29.37■■■□□ 2.29
NEPRO-209ENST00000470663 DNAJC5Q9H3Z4 198 aa29.31■■■□□ 2.28
NEPRO-209ENST00000470663 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.27
NEPRO-209ENST00000470663 THOC2Q8NI27 1593 aaKnown RBP29.2■■■□□ 2.26
NEPRO-209ENST00000470663 KIF21AQ7Z4S6 1674 aa29.19■■■□□ 2.26
NEPRO-209ENST00000470663 CADPSQ9ULU8 1353 aa29.19■■■□□ 2.26
NEPRO-209ENST00000470663 RSF1Q96T23 1441 aaPredicted RBP29.18■■■□□ 2.26
NEPRO-209ENST00000470663 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
NEPRO-209ENST00000470663 MRC2Q9UBG0 1479 aa28.92■■■□□ 2.22
NEPRO-209ENST00000470663 CFTRP13569 1480 aa28.88■■■□□ 2.21
NEPRO-209ENST00000470663 FANCD2Q9BXW9 1451 aa28.85■■■□□ 2.21
NEPRO-209ENST00000470663 CEP164Q9UPV0 1460 aa28.85■■■□□ 2.21
NEPRO-209ENST00000470663 WDR62O43379 1518 aa28.84■■■□□ 2.21
NEPRO-209ENST00000470663 CCDC88BA6NC98 1476 aa28.71■■■□□ 2.19
NEPRO-209ENST00000470663 PRDM2Q13029 1718 aa28.62■■■□□ 2.17
NEPRO-209ENST00000470663 URB2Q14146 1524 aaKnown RBP28.6■■■□□ 2.17
NEPRO-209ENST00000470663 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
NEPRO-209ENST00000470663 ABCC8Q09428 1581 aa28.28■■■□□ 2.12
NEPRO-209ENST00000470663 IFT140Q96RY7 1462 aa28.27■■■□□ 2.12
NEPRO-209ENST00000470663 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
NEPRO-209ENST00000470663 DNMBPQ6XZF7 1577 aa28.23■■■□□ 2.11
NEPRO-209ENST00000470663 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
NEPRO-209ENST00000470663 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
NEPRO-209ENST00000470663 SUPT5HO00267 1087 aaKnown RBP28.07■■■□□ 2.08
NEPRO-209ENST00000470663 TARBP1Q13395 1621 aaKnown RBP28.06■■■□□ 2.08
NEPRO-209ENST00000470663 EIF4G3O43432 1585 aaKnown RBP28.05■■■□□ 2.08
NEPRO-209ENST00000470663 POLA1P09884 1462 aaPredicted RBP28.04■■■□□ 2.08
NEPRO-209ENST00000470663 AQRO60306 1485 aaKnown RBP eCLIP28.01■■■□□ 2.07
NEPRO-209ENST00000470663 RAD54L2Q9Y4B4 1467 aa27.96■■■□□ 2.07
NEPRO-209ENST00000470663 SOGA1O94964 1423 aa27.94■■■□□ 2.06
NEPRO-209ENST00000470663 CUX1P39880 1505 aa27.92■■■□□ 2.06
NEPRO-209ENST00000470663 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.06
NEPRO-209ENST00000470663 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
NEPRO-209ENST00000470663 CHD1O14646 1710 aa27.84■■■□□ 2.05
NEPRO-209ENST00000470663 RIMBP3CA6NJZ7 1639 aa27.81■■■□□ 2.04
NEPRO-209ENST00000470663 RIMBP3BA6NNM3 1639 aa27.81■■■□□ 2.04
NEPRO-209ENST00000470663 RIMBP3Q9UFD9 1639 aa27.81■■■□□ 2.04
NEPRO-209ENST00000470663 FBLN2P98095 1184 aa27.8■■■□□ 2.04
NEPRO-209ENST00000470663 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
NEPRO-209ENST00000470663 ARHGEF11O15085 1522 aa27.73■■■□□ 2.03
NEPRO-209ENST00000470663 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.02
NEPRO-209ENST00000470663 GRIN2BQ13224 1484 aa27.65■■■□□ 2.02
NEPRO-209ENST00000470663 MAGI1Q96QZ7 1491 aaPredicted RBP27.63■■■□□ 2.01
NEPRO-209ENST00000470663 CHMP7Q8WUX9 453 aaPredicted RBP27.62■■■□□ 2.01
NEPRO-209ENST00000470663 GAPVD1Q14C86 1478 aa27.59■■■□□ 2.01
NEPRO-209ENST00000470663 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
NEPRO-209ENST00000470663 PBRM1Q86U86 1689 aa27.57■■■□□ 2
NEPRO-209ENST00000470663 CYB5RLQ6IPT4 315 aa27.57■■■□□ 2
NEPRO-209ENST00000470663 SYNJ2O15056 1496 aa27.54■■■□□ 2
NEPRO-209ENST00000470663 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
NEPRO-209ENST00000470663 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 2
NEPRO-209ENST00000470663 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
NEPRO-209ENST00000470663 BIVM-ERCC5R4GMW8 1640 aa27.51■■□□□ 1.99
NEPRO-209ENST00000470663 SYNJ1O43426 1573 aa27.5■■□□□ 1.99
NEPRO-209ENST00000470663 CLASP1Q7Z460 1538 aa27.5■■□□□ 1.99
NEPRO-209ENST00000470663 ARAP1Q96P48 1450 aa27.47■■□□□ 1.99
NEPRO-209ENST00000470663 GRIN2AQ12879 1464 aa27.3■■□□□ 1.96
NEPRO-209ENST00000470663 ADAMTS12P58397 1594 aa27.3■■□□□ 1.96
NEPRO-209ENST00000470663 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
NEPRO-209ENST00000470663 ERICH3Q5RHP9 1530 aa27.24■■□□□ 1.95
NEPRO-209ENST00000470663 TRHP20396 242 aaPredicted RBP27.2■■□□□ 1.94
NEPRO-209ENST00000470663 CEP170Q5SW79 1584 aa27.2■■□□□ 1.94
NEPRO-209ENST00000470663 NUP160Q12769 1436 aa27.19■■□□□ 1.94
NEPRO-209ENST00000470663 ERCC6L2Q5T890 1561 aa27.11■■□□□ 1.93
NEPRO-209ENST00000470663 SHROOM2Q13796 1616 aa27.05■■□□□ 1.92
NEPRO-209ENST00000470663 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
NEPRO-209ENST00000470663 IGF1RP08069 1367 aa26.98■■□□□ 1.91
NEPRO-209ENST00000470663 JPH4Q96JJ6 628 aa26.97■■□□□ 1.91
NEPRO-209ENST00000470663 PRG4Q92954 1404 aaPredicted RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms