RNA–Protein interactions for RNA: ENST00000491121.1

NEPRO-219, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-219ENST00000491121 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.75
NEPRO-219ENST00000491121 CCDC180Q9P1Z9 1646 aa28.32■■■□□ 2.12
NEPRO-219ENST00000491121 ZCCHC6Q5VYS8 1495 aaKnown RBP27.1■■□□□ 1.93
NEPRO-219ENST00000491121 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
NEPRO-219ENST00000491121 ABCC9O60706 1549 aa26.65■■□□□ 1.86
NEPRO-219ENST00000491121 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
NEPRO-219ENST00000491121 NACADO15069 1562 aa26.39■■□□□ 1.82
NEPRO-219ENST00000491121 DCAF8L2P0C7V8 631 aa26.21■■□□□ 1.79
NEPRO-219ENST00000491121 RB1CC1Q8TDY2 1594 aa26.13■■□□□ 1.77
NEPRO-219ENST00000491121 SHROOM4Q9ULL8 1493 aa25.78■■□□□ 1.72
NEPRO-219ENST00000491121 SCRIBQ14160 1630 aa25.76■■□□□ 1.71
NEPRO-219ENST00000491121 UNC13AQ9UPW8 1703 aa25.56■■□□□ 1.68
NEPRO-219ENST00000491121 BICRAQ9NZM4 1560 aa25.39■■□□□ 1.65
NEPRO-219ENST00000491121 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
NEPRO-219ENST00000491121 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
NEPRO-219ENST00000491121 BAZ1AQ9NRL2 1556 aaPredicted RBP24.92■■□□□ 1.58
NEPRO-219ENST00000491121 RSF1Q96T23 1441 aaPredicted RBP24.9■■□□□ 1.58
NEPRO-219ENST00000491121 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
NEPRO-219ENST00000491121 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
NEPRO-219ENST00000491121 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
NEPRO-219ENST00000491121 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
NEPRO-219ENST00000491121 EIF4G1Q04637 1599 aaKnown RBP24.59■■□□□ 1.53
NEPRO-219ENST00000491121 WIZO95785 1651 aa24.57■■□□□ 1.52
NEPRO-219ENST00000491121 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
NEPRO-219ENST00000491121 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
NEPRO-219ENST00000491121 TOP2AP11388 1531 aaKnown RBP24.44■■□□□ 1.5
NEPRO-219ENST00000491121 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
NEPRO-219ENST00000491121 HMGXB3Q12766 1538 aa24.33■■□□□ 1.49
NEPRO-219ENST00000491121 BAZ1BQ9UIG0 1483 aaKnown RBP24.25■■□□□ 1.47
NEPRO-219ENST00000491121 CC2D2AQ9P2K1 1620 aa24.22■■□□□ 1.47
NEPRO-219ENST00000491121 CCDC88BA6NC98 1476 aa24.1■■□□□ 1.45
NEPRO-219ENST00000491121 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
NEPRO-219ENST00000491121 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
NEPRO-219ENST00000491121 CFTRP13569 1480 aa23.73■■□□□ 1.39
NEPRO-219ENST00000491121 DNAJC5BQ9UF47 199 aa23.67■■□□□ 1.38
NEPRO-219ENST00000491121 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
NEPRO-219ENST00000491121 PRDM2Q13029 1718 aa23.6■■□□□ 1.37
NEPRO-219ENST00000491121 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
NEPRO-219ENST00000491121 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
NEPRO-219ENST00000491121 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
NEPRO-219ENST00000491121 NESP48681 1621 aa23.37■■□□□ 1.33
NEPRO-219ENST00000491121 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
NEPRO-219ENST00000491121 SYNJ1O43426 1573 aa23.33■■□□□ 1.33
NEPRO-219ENST00000491121 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.33
NEPRO-219ENST00000491121 TOP2BQ02880 1626 aa23.32■■□□□ 1.32
NEPRO-219ENST00000491121 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
NEPRO-219ENST00000491121 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
NEPRO-219ENST00000491121 CUX1P39880 1505 aa23.26■■□□□ 1.31
NEPRO-219ENST00000491121 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
NEPRO-219ENST00000491121 DNMBPQ6XZF7 1577 aa23.15■■□□□ 1.3
NEPRO-219ENST00000491121 KIF21AQ7Z4S6 1674 aa23.13■■□□□ 1.29
NEPRO-219ENST00000491121 TOPBP1Q92547 1522 aa23.08■■□□□ 1.29
NEPRO-219ENST00000491121 URB2Q14146 1524 aaKnown RBP23.08■■□□□ 1.28
NEPRO-219ENST00000491121 EEA1Q15075 1411 aa23.08■■□□□ 1.28
NEPRO-219ENST00000491121 MRC2Q9UBG0 1479 aa23.02■■□□□ 1.28
NEPRO-219ENST00000491121 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
NEPRO-219ENST00000491121 SOGA1O94964 1423 aa22.98■■□□□ 1.27
NEPRO-219ENST00000491121 WDR62O43379 1518 aa22.97■■□□□ 1.27
NEPRO-219ENST00000491121 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
NEPRO-219ENST00000491121 THOC2Q8NI27 1593 aaKnown RBP22.92■■□□□ 1.26
NEPRO-219ENST00000491121 RUSC2Q8N2Y8 1516 aa22.89■■□□□ 1.26
NEPRO-219ENST00000491121 ABCA10Q8WWZ4 1543 aa22.89■■□□□ 1.26
NEPRO-219ENST00000491121 ERCC6Q03468 1493 aa22.86■■□□□ 1.25
NEPRO-219ENST00000491121 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
NEPRO-219ENST00000491121 KIF27Q86VH2 1401 aa22.84■■□□□ 1.25
NEPRO-219ENST00000491121 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
NEPRO-219ENST00000491121 CUX2O14529 1486 aa22.79■■□□□ 1.24
NEPRO-219ENST00000491121 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
NEPRO-219ENST00000491121 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
NEPRO-219ENST00000491121 KIF21BO75037 1637 aa22.77■■□□□ 1.24
NEPRO-219ENST00000491121 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
NEPRO-219ENST00000491121 ABCA5Q8WWZ7 1642 aa22.72■■□□□ 1.23
NEPRO-219ENST00000491121 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
NEPRO-219ENST00000491121 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
NEPRO-219ENST00000491121 ERICH3Q5RHP9 1530 aa22.68■■□□□ 1.22
NEPRO-219ENST00000491121 IGF1RP08069 1367 aa22.66■■□□□ 1.22
NEPRO-219ENST00000491121 GOLGA3Q08378 1498 aa22.65■■□□□ 1.22
NEPRO-219ENST00000491121 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.21
NEPRO-219ENST00000491121 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
NEPRO-219ENST00000491121 CUL7Q14999 1698 aa22.57■■□□□ 1.2
NEPRO-219ENST00000491121 RAPGEF2Q9Y4G8 1499 aa22.56■■□□□ 1.2
NEPRO-219ENST00000491121 TNIKQ9UKE5 1360 aa22.56■■□□□ 1.2
NEPRO-219ENST00000491121 TDRD9Q8NDG6 1382 aaKnown RBP22.53■■□□□ 1.2
NEPRO-219ENST00000491121 CARMIL1Q5VZK9 1371 aa22.5■■□□□ 1.19
NEPRO-219ENST00000491121 ZNF608Q9ULD9 1512 aaPredicted RBP22.5■■□□□ 1.19
NEPRO-219ENST00000491121 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
NEPRO-219ENST00000491121 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
NEPRO-219ENST00000491121 EIF4G3O43432 1585 aaKnown RBP22.47■■□□□ 1.19
NEPRO-219ENST00000491121 AQRO60306 1485 aaKnown RBP eCLIP22.45■■□□□ 1.18
NEPRO-219ENST00000491121 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
NEPRO-219ENST00000491121 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
NEPRO-219ENST00000491121 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
NEPRO-219ENST00000491121 CEP162Q5TB80 1403 aa22.36■■□□□ 1.17
NEPRO-219ENST00000491121 UBTFP17480 764 aaKnown RBP22.32■■□□□ 1.16
NEPRO-219ENST00000491121 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
NEPRO-219ENST00000491121 SYNJ2O15056 1496 aa22.24■■□□□ 1.15
NEPRO-219ENST00000491121 EHMT2Q96KQ7 1210 aa22.24■■□□□ 1.15
NEPRO-219ENST00000491121 CTTNBP2Q8WZ74 1663 aa22.23■■□□□ 1.15
NEPRO-219ENST00000491121 CLIP1P30622 1438 aa22.23■■□□□ 1.15
NEPRO-219ENST00000491121 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms