RNA–Protein interactions for RNA: ENST00000496340.1

NEPRO-224, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-224ENST00000496340 NISCHQ9Y2I1 1504 aa26.92■■□□□ 1.9
NEPRO-224ENST00000496340 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
NEPRO-224ENST00000496340 ABCC9O60706 1549 aa23.68■■□□□ 1.38
NEPRO-224ENST00000496340 DCAF8L2P0C7V8 631 aa22.57■■□□□ 1.2
NEPRO-224ENST00000496340 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
NEPRO-224ENST00000496340 NACADO15069 1562 aa22.51■■□□□ 1.19
NEPRO-224ENST00000496340 ZCCHC6Q5VYS8 1495 aaKnown RBP22.38■■□□□ 1.17
NEPRO-224ENST00000496340 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
NEPRO-224ENST00000496340 DCAF1Q9Y4B6 1507 aa22.19■■□□□ 1.14
NEPRO-224ENST00000496340 UNC13AQ9UPW8 1703 aa22.18■■□□□ 1.14
NEPRO-224ENST00000496340 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
NEPRO-224ENST00000496340 BICRAQ9NZM4 1560 aa22.06■■□□□ 1.12
NEPRO-224ENST00000496340 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
NEPRO-224ENST00000496340 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
NEPRO-224ENST00000496340 SHROOM4Q9ULL8 1493 aa21.57■■□□□ 1.04
NEPRO-224ENST00000496340 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
NEPRO-224ENST00000496340 CC2D2AQ9P2K1 1620 aa21.38■■□□□ 1.01
NEPRO-224ENST00000496340 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
NEPRO-224ENST00000496340 SMARCA4P51532 1647 aa20.9■□□□□ 0.94
NEPRO-224ENST00000496340 ATAD2BQ9ULI0 1458 aa20.86■□□□□ 0.93
NEPRO-224ENST00000496340 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
NEPRO-224ENST00000496340 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
NEPRO-224ENST00000496340 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
NEPRO-224ENST00000496340 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
NEPRO-224ENST00000496340 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
NEPRO-224ENST00000496340 HMGXB3Q12766 1538 aa20.67■□□□□ 0.9
NEPRO-224ENST00000496340 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
NEPRO-224ENST00000496340 WIZO95785 1651 aa20.57■□□□□ 0.88
NEPRO-224ENST00000496340 NESP48681 1621 aa20.5■□□□□ 0.87
NEPRO-224ENST00000496340 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
NEPRO-224ENST00000496340 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
NEPRO-224ENST00000496340 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
NEPRO-224ENST00000496340 LAMC3Q9Y6N6 1575 aa20.25■□□□□ 0.83
NEPRO-224ENST00000496340 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
NEPRO-224ENST00000496340 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
NEPRO-224ENST00000496340 THOC2Q8NI27 1593 aaKnown RBP20.13■□□□□ 0.81
NEPRO-224ENST00000496340 CUX2O14529 1486 aa20.13■□□□□ 0.81
NEPRO-224ENST00000496340 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
NEPRO-224ENST00000496340 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
NEPRO-224ENST00000496340 CFTRP13569 1480 aa20.08■□□□□ 0.81
NEPRO-224ENST00000496340 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
NEPRO-224ENST00000496340 MRC2Q9UBG0 1479 aa19.96■□□□□ 0.79
NEPRO-224ENST00000496340 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
NEPRO-224ENST00000496340 WDR62O43379 1518 aa19.92■□□□□ 0.78
NEPRO-224ENST00000496340 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
NEPRO-224ENST00000496340 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
NEPRO-224ENST00000496340 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
NEPRO-224ENST00000496340 DNAJC5Q9H3Z4 198 aa19.82■□□□□ 0.76
NEPRO-224ENST00000496340 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
NEPRO-224ENST00000496340 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
NEPRO-224ENST00000496340 DNMBPQ6XZF7 1577 aa19.58■□□□□ 0.73
NEPRO-224ENST00000496340 IFT140Q96RY7 1462 aa19.53■□□□□ 0.72
NEPRO-224ENST00000496340 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
NEPRO-224ENST00000496340 CUX1P39880 1505 aa19.51■□□□□ 0.71
NEPRO-224ENST00000496340 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
NEPRO-224ENST00000496340 TARBP1Q13395 1621 aaKnown RBP19.49■□□□□ 0.71
NEPRO-224ENST00000496340 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
NEPRO-224ENST00000496340 AQRO60306 1485 aaKnown RBP eCLIP19.44■□□□□ 0.7
NEPRO-224ENST00000496340 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
NEPRO-224ENST00000496340 EIF4G3O43432 1585 aaKnown RBP19.41■□□□□ 0.7
NEPRO-224ENST00000496340 SOGA1O94964 1423 aa19.4■□□□□ 0.7
NEPRO-224ENST00000496340 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
NEPRO-224ENST00000496340 OSCARQ8IYS5 282 aa19.32■□□□□ 0.68
NEPRO-224ENST00000496340 SYNJ1O43426 1573 aa19.29■□□□□ 0.68
NEPRO-224ENST00000496340 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
NEPRO-224ENST00000496340 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
NEPRO-224ENST00000496340 TOP2BQ02880 1626 aa19.23■□□□□ 0.67
NEPRO-224ENST00000496340 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
NEPRO-224ENST00000496340 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
NEPRO-224ENST00000496340 CHD1O14646 1710 aa19.2■□□□□ 0.66
NEPRO-224ENST00000496340 SNAPC4Q5SXM2 1469 aa19.2■□□□□ 0.66
NEPRO-224ENST00000496340 FBLN2P98095 1184 aa19.17■□□□□ 0.66
NEPRO-224ENST00000496340 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
NEPRO-224ENST00000496340 ABCA5Q8WWZ7 1642 aa19.15■□□□□ 0.66
NEPRO-224ENST00000496340 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
NEPRO-224ENST00000496340 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
NEPRO-224ENST00000496340 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
NEPRO-224ENST00000496340 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
NEPRO-224ENST00000496340 RIMBP3CA6NJZ7 1639 aa19.07■□□□□ 0.64
NEPRO-224ENST00000496340 RIMBP3BA6NNM3 1639 aa19.07■□□□□ 0.64
NEPRO-224ENST00000496340 RIMBP3Q9UFD9 1639 aa19.07■□□□□ 0.64
NEPRO-224ENST00000496340 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
NEPRO-224ENST00000496340 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
NEPRO-224ENST00000496340 ARHGEF11O15085 1522 aa19.04■□□□□ 0.64
NEPRO-224ENST00000496340 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
NEPRO-224ENST00000496340 ADAMTS12P58397 1594 aa18.97■□□□□ 0.63
NEPRO-224ENST00000496340 GRIN2AQ12879 1464 aa18.93■□□□□ 0.62
NEPRO-224ENST00000496340 ERICH3Q5RHP9 1530 aa18.93■□□□□ 0.62
NEPRO-224ENST00000496340 ARAP1Q96P48 1450 aa18.91■□□□□ 0.62
NEPRO-224ENST00000496340 CYB5RLQ6IPT4 315 aa18.91■□□□□ 0.62
NEPRO-224ENST00000496340 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
NEPRO-224ENST00000496340 CEP170Q5SW79 1584 aa18.89■□□□□ 0.62
NEPRO-224ENST00000496340 IGF1RP08069 1367 aa18.89■□□□□ 0.61
NEPRO-224ENST00000496340 NUP160Q12769 1436 aa18.87■□□□□ 0.61
NEPRO-224ENST00000496340 ERCC6L2Q5T890 1561 aa18.84■□□□□ 0.61
NEPRO-224ENST00000496340 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
NEPRO-224ENST00000496340 RUSC2Q8N2Y8 1516 aa18.81■□□□□ 0.6
NEPRO-224ENST00000496340 SHROOM2Q13796 1616 aa18.74■□□□□ 0.59
NEPRO-224ENST00000496340 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.59
NEPRO-224ENST00000496340 JPH4Q96JJ6 628 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms