RNA–Protein interactions for RNA: ENST00000486271.5

NEPRO-217, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 2,842 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-217ENST00000486271 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
NEPRO-217ENST00000486271 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
NEPRO-217ENST00000486271 SUPT5HO00267 1087 aaKnown RBP20.52■□□□□ 0.88
NEPRO-217ENST00000486271 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
NEPRO-217ENST00000486271 ZCCHC6Q5VYS8 1495 aaKnown RBP20.14■□□□□ 0.82
NEPRO-217ENST00000486271 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
NEPRO-217ENST00000486271 CHIC1Q5VXU3 224 aa19.84■□□□□ 0.77
NEPRO-217ENST00000486271 MYO15BQ96JP2 1530 aa19.8■□□□□ 0.76
NEPRO-217ENST00000486271 PCGF6Q9BYE7 350 aa19.49■□□□□ 0.71
NEPRO-217ENST00000486271 LOC105371045A0A1W2PR82 267 aa19.45■□□□□ 0.7
NEPRO-217ENST00000486271 HRCP23327 699 aa19.41■□□□□ 0.7
NEPRO-217ENST00000486271 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
NEPRO-217ENST00000486271 PPARGC1BQ86YN6 1023 aaKnown RBP19.25■□□□□ 0.67
NEPRO-217ENST00000486271 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
NEPRO-217ENST00000486271 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
NEPRO-217ENST00000486271 FAM9AQ8IZU1 332 aaPredicted RBP19.03■□□□□ 0.64
NEPRO-217ENST00000486271 RSF1Q96T23 1441 aaPredicted RBP19.01■□□□□ 0.63
NEPRO-217ENST00000486271 ABCC9O60706 1549 aa19■□□□□ 0.63
NEPRO-217ENST00000486271 TRIM41Q8WV44 630 aa18.96■□□□□ 0.63
NEPRO-217ENST00000486271 TRIM26Q12899 539 aaPredicted RBP18.9■□□□□ 0.62
NEPRO-217ENST00000486271 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
NEPRO-217ENST00000486271 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
NEPRO-217ENST00000486271 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
NEPRO-217ENST00000486271 WIZO95785 1651 aa18.56■□□□□ 0.56
NEPRO-217ENST00000486271 NACADO15069 1562 aa18.54■□□□□ 0.56
NEPRO-217ENST00000486271 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
NEPRO-217ENST00000486271 TTBK1Q5TCY1 1321 aaPredicted RBP18.41■□□□□ 0.54
NEPRO-217ENST00000486271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.32■□□□□ 0.52
NEPRO-217ENST00000486271 BAZ1AQ9NRL2 1556 aaPredicted RBP18.28■□□□□ 0.52
NEPRO-217ENST00000486271 ABCC8Q09428 1581 aa18.27■□□□□ 0.51
NEPRO-217ENST00000486271 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
NEPRO-217ENST00000486271 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
NEPRO-217ENST00000486271 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
NEPRO-217ENST00000486271 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
NEPRO-217ENST00000486271 SOGA1O94964 1423 aa18.15■□□□□ 0.5
NEPRO-217ENST00000486271 TOP2AP11388 1531 aaKnown RBP18.12■□□□□ 0.49
NEPRO-217ENST00000486271 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
NEPRO-217ENST00000486271 UBTFP17480 764 aaKnown RBP18.1■□□□□ 0.49
NEPRO-217ENST00000486271 RUSC2Q8N2Y8 1516 aa18.09■□□□□ 0.49
NEPRO-217ENST00000486271 SMARCA2P51531 1590 aa18.08■□□□□ 0.49
NEPRO-217ENST00000486271 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
NEPRO-217ENST00000486271 CEP162Q5TB80 1403 aa18.04■□□□□ 0.48
NEPRO-217ENST00000486271 CSRNP3Q8WYN3 585 aa18.03■□□□□ 0.48
NEPRO-217ENST00000486271 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
NEPRO-217ENST00000486271 RANGAP1P46060 587 aaPredicted RBP17.94■□□□□ 0.46
NEPRO-217ENST00000486271 TNIKQ9UKE5 1360 aa17.93■□□□□ 0.46
NEPRO-217ENST00000486271 WRNQ14191 1432 aaPredicted RBP eCLIP17.9■□□□□ 0.46
NEPRO-217ENST00000486271 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
NEPRO-217ENST00000486271 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
NEPRO-217ENST00000486271 BICRAQ9NZM4 1560 aa17.84■□□□□ 0.45
NEPRO-217ENST00000486271 NEUROD1Q13562 356 aa17.84■□□□□ 0.45
NEPRO-217ENST00000486271 GOLGA3Q08378 1498 aa17.79■□□□□ 0.44
NEPRO-217ENST00000486271 EEA1Q15075 1411 aa17.78■□□□□ 0.44
NEPRO-217ENST00000486271 ACIN1Q9UKV3 1341 aaKnown RBP17.77■□□□□ 0.43
NEPRO-217ENST00000486271 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
NEPRO-217ENST00000486271 ATAD2BQ9ULI0 1458 aa17.68■□□□□ 0.42
NEPRO-217ENST00000486271 CLIP1P30622 1438 aa17.68■□□□□ 0.42
NEPRO-217ENST00000486271 GTF3C3Q9Y5Q9 886 aa17.67■□□□□ 0.42
NEPRO-217ENST00000486271 ZNF316A6NFI3 1004 aaPredicted RBP17.66■□□□□ 0.42
NEPRO-217ENST00000486271 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
NEPRO-217ENST00000486271 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
NEPRO-217ENST00000486271 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
NEPRO-217ENST00000486271 RAPGEF2Q9Y4G8 1499 aa17.64■□□□□ 0.41
NEPRO-217ENST00000486271 APLP2Q06481 763 aa17.64■□□□□ 0.41
NEPRO-217ENST00000486271 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
NEPRO-217ENST00000486271 CENPBP07199 599 aaPredicted RBP17.58■□□□□ 0.41
NEPRO-217ENST00000486271 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
NEPRO-217ENST00000486271 MIER1Q8N108 512 aa17.54■□□□□ 0.4
NEPRO-217ENST00000486271 KIF21BO75037 1637 aa17.54■□□□□ 0.4
NEPRO-217ENST00000486271 PELP1Q8IZL8 1130 aaKnown RBP17.5■□□□□ 0.39
NEPRO-217ENST00000486271 KANK4Q5T7N3 995 aaPredicted RBP17.48■□□□□ 0.39
NEPRO-217ENST00000486271 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
NEPRO-217ENST00000486271 ITGAEP38570 1179 aa17.4■□□□□ 0.38
NEPRO-217ENST00000486271 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
NEPRO-217ENST00000486271 PRXQ9BXM0 1461 aa17.33■□□□□ 0.36
NEPRO-217ENST00000486271 CUX1P39880 1505 aa17.32■□□□□ 0.36
NEPRO-217ENST00000486271 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
NEPRO-217ENST00000486271 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
NEPRO-217ENST00000486271 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
NEPRO-217ENST00000486271 NCAPD3P42695 1498 aa17.24■□□□□ 0.35
NEPRO-217ENST00000486271 ERICH3Q5RHP9 1530 aa17.23■□□□□ 0.35
NEPRO-217ENST00000486271 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
NEPRO-217ENST00000486271 ATP1B4Q9UN42 357 aaPredicted RBP17.18■□□□□ 0.34
NEPRO-217ENST00000486271 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
NEPRO-217ENST00000486271 CFTRP13569 1480 aa17.17■□□□□ 0.34
NEPRO-217ENST00000486271 HMGXB3Q12766 1538 aa17.15■□□□□ 0.34
NEPRO-217ENST00000486271 CUX2O14529 1486 aa17.15■□□□□ 0.34
NEPRO-217ENST00000486271 CCNB3Q8WWL7 1395 aa17.14■□□□□ 0.33
NEPRO-217ENST00000486271 IGF1RP08069 1367 aa17.13■□□□□ 0.33
NEPRO-217ENST00000486271 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
NEPRO-217ENST00000486271 CLSPNQ9HAW4 1339 aa17.1■□□□□ 0.33
NEPRO-217ENST00000486271 FAM50AQ14320 339 aaKnown RBP17.08■□□□□ 0.33
NEPRO-217ENST00000486271 KCNH8Q96L42 1107 aa17.06■□□□□ 0.32
NEPRO-217ENST00000486271 CARMIL1Q5VZK9 1371 aa17.06■□□□□ 0.32
NEPRO-217ENST00000486271 RAB3GAP2Q9H2M9 1393 aa17.06■□□□□ 0.32
NEPRO-217ENST00000486271 SIN3AQ96ST3 1273 aa17.05■□□□□ 0.32
NEPRO-217ENST00000486271 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
NEPRO-217ENST00000486271 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
NEPRO-217ENST00000486271 HIRIP3Q9BW71 556 aaPredicted RBP17■□□□□ 0.31
NEPRO-217ENST00000486271 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms