RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-222ENST00000494891 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
NEPRO-222ENST00000494891 CCDC180Q9P1Z9 1646 aa22.76■■□□□ 1.23
NEPRO-222ENST00000494891 ABCC9O60706 1549 aa22.3■■□□□ 1.16
NEPRO-222ENST00000494891 RB1CC1Q8TDY2 1594 aa21.48■■□□□ 1.03
NEPRO-222ENST00000494891 NACADO15069 1562 aa21.44■■□□□ 1.02
NEPRO-222ENST00000494891 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
NEPRO-222ENST00000494891 ZCCHC6Q5VYS8 1495 aaKnown RBP21.18■□□□□ 0.98
NEPRO-222ENST00000494891 DCAF1Q9Y4B6 1507 aa21.15■□□□□ 0.98
NEPRO-222ENST00000494891 DCAF8L2P0C7V8 631 aa21.14■□□□□ 0.97
NEPRO-222ENST00000494891 UNC13AQ9UPW8 1703 aa20.96■□□□□ 0.95
NEPRO-222ENST00000494891 BICRAQ9NZM4 1560 aa20.84■□□□□ 0.93
NEPRO-222ENST00000494891 PABPN1Q86U42 306 aaKnown RBP eCLIP20.77■□□□□ 0.92
NEPRO-222ENST00000494891 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
NEPRO-222ENST00000494891 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
NEPRO-222ENST00000494891 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
NEPRO-222ENST00000494891 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
NEPRO-222ENST00000494891 CC2D2AQ9P2K1 1620 aa20.23■□□□□ 0.83
NEPRO-222ENST00000494891 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
NEPRO-222ENST00000494891 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
NEPRO-222ENST00000494891 SMARCA4P51532 1647 aa19.78■□□□□ 0.76
NEPRO-222ENST00000494891 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
NEPRO-222ENST00000494891 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
NEPRO-222ENST00000494891 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
NEPRO-222ENST00000494891 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
NEPRO-222ENST00000494891 PEG3Q9GZU2 1588 aa19.68■□□□□ 0.74
NEPRO-222ENST00000494891 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
NEPRO-222ENST00000494891 BAZ1BQ9UIG0 1483 aaKnown RBP19.53■□□□□ 0.72
NEPRO-222ENST00000494891 WIZO95785 1651 aa19.33■□□□□ 0.68
NEPRO-222ENST00000494891 RSF1Q96T23 1441 aaPredicted RBP19.31■□□□□ 0.68
NEPRO-222ENST00000494891 LAMC3Q9Y6N6 1575 aa19.29■□□□□ 0.68
NEPRO-222ENST00000494891 NESP48681 1621 aa19.25■□□□□ 0.67
NEPRO-222ENST00000494891 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
NEPRO-222ENST00000494891 CUX2O14529 1486 aa19.22■□□□□ 0.67
NEPRO-222ENST00000494891 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
NEPRO-222ENST00000494891 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
NEPRO-222ENST00000494891 PDS5BQ9NTI5 1447 aa19.14■□□□□ 0.65
NEPRO-222ENST00000494891 THOC2Q8NI27 1593 aaKnown RBP19.07■□□□□ 0.64
NEPRO-222ENST00000494891 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
NEPRO-222ENST00000494891 CFTRP13569 1480 aa19.04■□□□□ 0.64
NEPRO-222ENST00000494891 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
NEPRO-222ENST00000494891 CCDC88BA6NC98 1476 aa18.91■□□□□ 0.62
NEPRO-222ENST00000494891 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
NEPRO-222ENST00000494891 CEP164Q9UPV0 1460 aa18.91■□□□□ 0.62
NEPRO-222ENST00000494891 WDR62O43379 1518 aa18.91■□□□□ 0.62
NEPRO-222ENST00000494891 PRDM2Q13029 1718 aa18.86■□□□□ 0.61
NEPRO-222ENST00000494891 DNAJC5Q9H3Z4 198 aa18.83■□□□□ 0.6
NEPRO-222ENST00000494891 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
NEPRO-222ENST00000494891 ABCC8Q09428 1581 aa18.65■□□□□ 0.58
NEPRO-222ENST00000494891 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
NEPRO-222ENST00000494891 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.56
NEPRO-222ENST00000494891 IFT140Q96RY7 1462 aa18.55■□□□□ 0.56
NEPRO-222ENST00000494891 SUPT5HO00267 1087 aaKnown RBP18.51■□□□□ 0.55
NEPRO-222ENST00000494891 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
NEPRO-222ENST00000494891 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
NEPRO-222ENST00000494891 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
NEPRO-222ENST00000494891 CUX1P39880 1505 aa18.38■□□□□ 0.53
NEPRO-222ENST00000494891 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
NEPRO-222ENST00000494891 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
NEPRO-222ENST00000494891 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
NEPRO-222ENST00000494891 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.53
NEPRO-222ENST00000494891 SOGA1O94964 1423 aa18.33■□□□□ 0.53
NEPRO-222ENST00000494891 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
NEPRO-222ENST00000494891 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.52
NEPRO-222ENST00000494891 TDRD9Q8NDG6 1382 aaKnown RBP18.22■□□□□ 0.51
NEPRO-222ENST00000494891 TOP2BQ02880 1626 aa18.21■□□□□ 0.51
NEPRO-222ENST00000494891 BIVM-ERCC5R4GMW8 1640 aa18.21■□□□□ 0.51
NEPRO-222ENST00000494891 ABCA10Q8WWZ4 1543 aa18.21■□□□□ 0.51
NEPRO-222ENST00000494891 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
NEPRO-222ENST00000494891 GRIN2BQ13224 1484 aa18.17■□□□□ 0.5
NEPRO-222ENST00000494891 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
NEPRO-222ENST00000494891 CHD1O14646 1710 aa18.15■□□□□ 0.5
NEPRO-222ENST00000494891 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
NEPRO-222ENST00000494891 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
NEPRO-222ENST00000494891 ABCA5Q8WWZ7 1642 aa18.13■□□□□ 0.49
NEPRO-222ENST00000494891 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
NEPRO-222ENST00000494891 PBRM1Q86U86 1689 aa18.09■□□□□ 0.49
NEPRO-222ENST00000494891 SYNJ2O15056 1496 aa18.08■□□□□ 0.49
NEPRO-222ENST00000494891 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
NEPRO-222ENST00000494891 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
NEPRO-222ENST00000494891 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
NEPRO-222ENST00000494891 ARHGEF11O15085 1522 aa18.04■□□□□ 0.48
NEPRO-222ENST00000494891 FBLN2P98095 1184 aa18.02■□□□□ 0.48
NEPRO-222ENST00000494891 CHMP7Q8WUX9 453 aaPredicted RBP18.02■□□□□ 0.48
NEPRO-222ENST00000494891 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.47
NEPRO-222ENST00000494891 ERICH3Q5RHP9 1530 aa17.99■□□□□ 0.47
NEPRO-222ENST00000494891 TRIM41Q8WV44 630 aa17.96■□□□□ 0.47
NEPRO-222ENST00000494891 ADAMTS12P58397 1594 aa17.96■□□□□ 0.46
NEPRO-222ENST00000494891 FHAD1B1AJZ9 1412 aa17.94■□□□□ 0.46
NEPRO-222ENST00000494891 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
NEPRO-222ENST00000494891 NUP160Q12769 1436 aa17.89■□□□□ 0.46
NEPRO-222ENST00000494891 ARAP1Q96P48 1450 aa17.88■□□□□ 0.45
NEPRO-222ENST00000494891 KIF27Q86VH2 1401 aa17.83■□□□□ 0.45
NEPRO-222ENST00000494891 CEP170Q5SW79 1584 aa17.83■□□□□ 0.44
NEPRO-222ENST00000494891 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
NEPRO-222ENST00000494891 IGF1RP08069 1367 aa17.79■□□□□ 0.44
NEPRO-222ENST00000494891 SHROOM2Q13796 1616 aa17.79■□□□□ 0.44
NEPRO-222ENST00000494891 CUL7Q14999 1698 aa17.77■□□□□ 0.44
NEPRO-222ENST00000494891 RUSC2Q8N2Y8 1516 aa17.7■□□□□ 0.42
NEPRO-222ENST00000494891 ERCC6L2Q5T890 1561 aa17.67■□□□□ 0.42
NEPRO-222ENST00000494891 KIAA0586Q9BVV6 1533 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms