RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 NISCHQ9Y2I1 1504 aa27.93■■■□□ 2.06
VPS45-212ENST00000611412 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
VPS45-212ENST00000611412 ABCC9O60706 1549 aa23.68■■□□□ 1.38
VPS45-212ENST00000611412 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
VPS45-212ENST00000611412 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
VPS45-212ENST00000611412 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
VPS45-212ENST00000611412 NACADO15069 1562 aa22.94■■□□□ 1.26
VPS45-212ENST00000611412 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.26
VPS45-212ENST00000611412 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
VPS45-212ENST00000611412 SHROOM4Q9ULL8 1493 aa22.59■■□□□ 1.21
VPS45-212ENST00000611412 SCRIBQ14160 1630 aa22.58■■□□□ 1.2
VPS45-212ENST00000611412 UNC13AQ9UPW8 1703 aa22.42■■□□□ 1.18
VPS45-212ENST00000611412 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
VPS45-212ENST00000611412 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
VPS45-212ENST00000611412 CECR2Q9BXF3 1484 aa21.78■■□□□ 1.08
VPS45-212ENST00000611412 MROH2BQ7Z745 1585 aa21.59■■□□□ 1.05
VPS45-212ENST00000611412 BAZ1AQ9NRL2 1556 aaPredicted RBP21.58■■□□□ 1.05
VPS45-212ENST00000611412 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.04
VPS45-212ENST00000611412 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
VPS45-212ENST00000611412 RSF1Q96T23 1441 aaPredicted RBP21.51■■□□□ 1.03
VPS45-212ENST00000611412 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
VPS45-212ENST00000611412 WIZO95785 1651 aa21.41■■□□□ 1.02
VPS45-212ENST00000611412 CC2D2AQ9P2K1 1620 aa21.38■■□□□ 1.01
VPS45-212ENST00000611412 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
VPS45-212ENST00000611412 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
VPS45-212ENST00000611412 SMARCA2P51531 1590 aa21.27■■□□□ 1
VPS45-212ENST00000611412 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
VPS45-212ENST00000611412 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
VPS45-212ENST00000611412 NCAPD3P42695 1498 aa21.18■□□□□ 0.98
VPS45-212ENST00000611412 TOP2AP11388 1531 aaKnown RBP21.12■□□□□ 0.97
VPS45-212ENST00000611412 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
VPS45-212ENST00000611412 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
VPS45-212ENST00000611412 NESP48681 1621 aa20.66■□□□□ 0.9
VPS45-212ENST00000611412 CADPSQ9ULU8 1353 aa20.63■□□□□ 0.89
VPS45-212ENST00000611412 CFTRP13569 1480 aa20.6■□□□□ 0.89
VPS45-212ENST00000611412 LAMC3Q9Y6N6 1575 aa20.54■□□□□ 0.88
VPS45-212ENST00000611412 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
VPS45-212ENST00000611412 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
VPS45-212ENST00000611412 PDS5BQ9NTI5 1447 aa20.4■□□□□ 0.86
VPS45-212ENST00000611412 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
VPS45-212ENST00000611412 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
VPS45-212ENST00000611412 ERCC6Q03468 1493 aa20.33■□□□□ 0.85
VPS45-212ENST00000611412 CEP164Q9UPV0 1460 aa20.33■□□□□ 0.85
VPS45-212ENST00000611412 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
VPS45-212ENST00000611412 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.83
VPS45-212ENST00000611412 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
VPS45-212ENST00000611412 CUX1P39880 1505 aa20.21■□□□□ 0.83
VPS45-212ENST00000611412 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
VPS45-212ENST00000611412 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
VPS45-212ENST00000611412 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
VPS45-212ENST00000611412 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
VPS45-212ENST00000611412 DNMBPQ6XZF7 1577 aa20.14■□□□□ 0.81
VPS45-212ENST00000611412 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
VPS45-212ENST00000611412 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
VPS45-212ENST00000611412 BIVM-ERCC5R4GMW8 1640 aa20.11■□□□□ 0.81
VPS45-212ENST00000611412 WDR62O43379 1518 aa20.08■□□□□ 0.81
VPS45-212ENST00000611412 FGD5Q6ZNL6 1462 aa20.06■□□□□ 0.8
VPS45-212ENST00000611412 POLA1P09884 1462 aaPredicted RBP20.02■□□□□ 0.8
VPS45-212ENST00000611412 RAD54L2Q9Y4B4 1467 aa19.99■□□□□ 0.79
VPS45-212ENST00000611412 SOGA1O94964 1423 aa19.95■□□□□ 0.78
VPS45-212ENST00000611412 CUX2O14529 1486 aa19.94■□□□□ 0.78
VPS45-212ENST00000611412 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
VPS45-212ENST00000611412 RUSC2Q8N2Y8 1516 aa19.88■□□□□ 0.77
VPS45-212ENST00000611412 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
VPS45-212ENST00000611412 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
VPS45-212ENST00000611412 ABCA10Q8WWZ4 1543 aa19.84■□□□□ 0.77
VPS45-212ENST00000611412 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.77
VPS45-212ENST00000611412 WDR97A6NE52 1622 aa19.82■□□□□ 0.76
VPS45-212ENST00000611412 ZNF608Q9ULD9 1512 aaPredicted RBP19.81■□□□□ 0.76
VPS45-212ENST00000611412 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.761e-6■■■■□ 24.5
VPS45-212ENST00000611412 KIF27Q86VH2 1401 aa19.78■□□□□ 0.76
VPS45-212ENST00000611412 ABCA5Q8WWZ7 1642 aa19.72■□□□□ 0.75
VPS45-212ENST00000611412 GAPVD1Q14C86 1478 aa19.72■□□□□ 0.75
VPS45-212ENST00000611412 EIF4G3O43432 1585 aaKnown RBP19.72■□□□□ 0.75
VPS45-212ENST00000611412 EHMT2Q96KQ7 1210 aa19.69■□□□□ 0.74
VPS45-212ENST00000611412 EEA1Q15075 1411 aa19.68■□□□□ 0.74
VPS45-212ENST00000611412 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
VPS45-212ENST00000611412 IGF1RP08069 1367 aa19.66■□□□□ 0.74
VPS45-212ENST00000611412 PBRM1Q86U86 1689 aa19.64■□□□□ 0.74
VPS45-212ENST00000611412 GRIN2BQ13224 1484 aa19.62■□□□□ 0.73
VPS45-212ENST00000611412 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
VPS45-212ENST00000611412 SNAPC4Q5SXM2 1469 aa19.58■□□□□ 0.72
VPS45-212ENST00000611412 LOC105371045A0A1W2PR82 267 aa19.56■□□□□ 0.72
VPS45-212ENST00000611412 CARMIL1Q5VZK9 1371 aa19.55■□□□□ 0.72
VPS45-212ENST00000611412 PRXQ9BXM0 1461 aa19.52■□□□□ 0.72
VPS45-212ENST00000611412 CUL7Q14999 1698 aa19.51■□□□□ 0.71
VPS45-212ENST00000611412 RAPGEF2Q9Y4G8 1499 aa19.51■□□□□ 0.71
VPS45-212ENST00000611412 ADAMTS12P58397 1594 aa19.51■□□□□ 0.71
VPS45-212ENST00000611412 FBLN2P98095 1184 aa19.5■□□□□ 0.71
VPS45-212ENST00000611412 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
VPS45-212ENST00000611412 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
VPS45-212ENST00000611412 KIF21BO75037 1637 aa19.48■□□□□ 0.71
VPS45-212ENST00000611412 CHMP7Q8WUX9 453 aaPredicted RBP19.45■□□□□ 0.7
VPS45-212ENST00000611412 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
VPS45-212ENST00000611412 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
VPS45-212ENST00000611412 SYNJ2O15056 1496 aa19.43■□□□□ 0.7
VPS45-212ENST00000611412 GRIN2AQ12879 1464 aa19.39■□□□□ 0.69
VPS45-212ENST00000611412 CHD1O14646 1710 aa19.38■□□□□ 0.69
VPS45-212ENST00000611412 RANGAP1P46060 587 aaPredicted RBP19.34■□□□□ 0.69
VPS45-212ENST00000611412 CEP170Q5SW79 1584 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms