RNA–Protein interactions for RNA: ENST00000369128.9

VPS45-201, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2 BASIC

Gene VPS45, Length 2,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-201ENST00000369128 NISCHQ9Y2I1 1504 aa20.57■□□□□ 0.88
VPS45-201ENST00000369128 CCDC180Q9P1Z9 1646 aa17.92■□□□□ 0.46
VPS45-201ENST00000369128 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
VPS45-201ENST00000369128 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.31
VPS45-201ENST00000369128 ABCC9O60706 1549 aa16.94■□□□□ 0.3
VPS45-201ENST00000369128 DCAF8L2P0C7V8 631 aa16.92■□□□□ 0.3
VPS45-201ENST00000369128 SHROOM4Q9ULL8 1493 aa16.84■□□□□ 0.29
VPS45-201ENST00000369128 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
VPS45-201ENST00000369128 NACADO15069 1562 aa16.64■□□□□ 0.26
VPS45-201ENST00000369128 SCRIBQ14160 1630 aa16.54■□□□□ 0.24
VPS45-201ENST00000369128 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
VPS45-201ENST00000369128 UNC13AQ9UPW8 1703 aa16.32■□□□□ 0.2
VPS45-201ENST00000369128 SUPT5HO00267 1087 aaKnown RBP16.16■□□□□ 0.18
VPS45-201ENST00000369128 BICRAQ9NZM4 1560 aa16.09■□□□□ 0.17
VPS45-201ENST00000369128 CECR2Q9BXF3 1484 aa16.02■□□□□ 0.16
VPS45-201ENST00000369128 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
VPS45-201ENST00000369128 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
VPS45-201ENST00000369128 MROH2BQ7Z745 1585 aa15.93■□□□□ 0.14
VPS45-201ENST00000369128 BAZ1AQ9NRL2 1556 aaPredicted RBP15.86■□□□□ 0.13
VPS45-201ENST00000369128 SMARCA4P51532 1647 aa15.83■□□□□ 0.12
VPS45-201ENST00000369128 WIZO95785 1651 aa15.83■□□□□ 0.12
VPS45-201ENST00000369128 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
VPS45-201ENST00000369128 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
VPS45-201ENST00000369128 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
VPS45-201ENST00000369128 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
VPS45-201ENST00000369128 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
VPS45-201ENST00000369128 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
VPS45-201ENST00000369128 CCDC88BA6NC98 1476 aa15.44■□□□□ 0.06
VPS45-201ENST00000369128 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
VPS45-201ENST00000369128 HMGXB3Q12766 1538 aa15.37■□□□□ 0.05
VPS45-201ENST00000369128 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
VPS45-201ENST00000369128 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
VPS45-201ENST00000369128 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
VPS45-201ENST00000369128 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
VPS45-201ENST00000369128 CFTRP13569 1480 aa15.05■□□□□ 0
VPS45-201ENST00000369128 PRDM2Q13029 1718 aa15.04■□□□□ -0
VPS45-201ENST00000369128 SYNJ1O43426 1573 aa15.03■□□□□ -0
VPS45-201ENST00000369128 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
VPS45-201ENST00000369128 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
VPS45-201ENST00000369128 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.01
VPS45-201ENST00000369128 FAM9AQ8IZU1 332 aaPredicted RBP14.93□□□□□ -0.02
VPS45-201ENST00000369128 LOC105371045A0A1W2PR82 267 aa14.92□□□□□ -0.02
VPS45-201ENST00000369128 NESP48681 1621 aa14.92□□□□□ -0.02
VPS45-201ENST00000369128 TOP2BQ02880 1626 aa14.92□□□□□ -0.02
VPS45-201ENST00000369128 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
VPS45-201ENST00000369128 CUX1P39880 1505 aa14.89□□□□□ -0.03
VPS45-201ENST00000369128 SOGA1O94964 1423 aa14.88□□□□□ -0.03
VPS45-201ENST00000369128 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
VPS45-201ENST00000369128 RUSC2Q8N2Y8 1516 aa14.85□□□□□ -0.03
VPS45-201ENST00000369128 FANCD2Q9BXW9 1451 aa14.83□□□□□ -0.04
VPS45-201ENST00000369128 KIF21AQ7Z4S6 1674 aa14.76□□□□□ -0.05
VPS45-201ENST00000369128 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
VPS45-201ENST00000369128 EEA1Q15075 1411 aa14.75□□□□□ -0.05
VPS45-201ENST00000369128 CEP164Q9UPV0 1460 aa14.73□□□□□ -0.05
VPS45-201ENST00000369128 DNMBPQ6XZF7 1577 aa14.71□□□□□ -0.05
VPS45-201ENST00000369128 FGD5Q6ZNL6 1462 aa14.7□□□□□ -0.06
VPS45-201ENST00000369128 TOPBP1Q92547 1522 aa14.69□□□□□ -0.06
VPS45-201ENST00000369128 PDS5BQ9NTI5 1447 aa14.68□□□□□ -0.06
VPS45-201ENST00000369128 URB2Q14146 1524 aaKnown RBP14.68□□□□□ -0.06
VPS45-201ENST00000369128 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
VPS45-201ENST00000369128 KIF21BO75037 1637 aa14.64□□□□□ -0.07
VPS45-201ENST00000369128 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
VPS45-201ENST00000369128 GOLGA3Q08378 1498 aa14.6□□□□□ -0.07
VPS45-201ENST00000369128 KIF27Q86VH2 1401 aa14.6□□□□□ -0.07
VPS45-201ENST00000369128 CUX2O14529 1486 aa14.59□□□□□ -0.07
VPS45-201ENST00000369128 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
VPS45-201ENST00000369128 RAPGEF2Q9Y4G8 1499 aa14.58□□□□□ -0.08
VPS45-201ENST00000369128 WDR97A6NE52 1622 aa14.58□□□□□ -0.08
VPS45-201ENST00000369128 PRXQ9BXM0 1461 aa14.55□□□□□ -0.08
VPS45-201ENST00000369128 ABCA10Q8WWZ4 1543 aa14.55□□□□□ -0.08
VPS45-201ENST00000369128 MRC2Q9UBG0 1479 aa14.54□□□□□ -0.08
VPS45-201ENST00000369128 TNIKQ9UKE5 1360 aa14.54□□□□□ -0.08
VPS45-201ENST00000369128 ERICH3Q5RHP9 1530 aa14.52□□□□□ -0.08
VPS45-201ENST00000369128 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
VPS45-201ENST00000369128 TARBP1Q13395 1621 aaKnown RBP14.5□□□□□ -0.09
VPS45-201ENST00000369128 WDR62O43379 1518 aa14.49□□□□□ -0.09
VPS45-201ENST00000369128 UBTFP17480 764 aaKnown RBP14.49□□□□□ -0.09
VPS45-201ENST00000369128 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
VPS45-201ENST00000369128 IGF1RP08069 1367 aa14.48□□□□□ -0.09
VPS45-201ENST00000369128 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
VPS45-201ENST00000369128 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
VPS45-201ENST00000369128 TDRD9Q8NDG6 1382 aaKnown RBP14.42□□□□□ -0.1
VPS45-201ENST00000369128 CARMIL1Q5VZK9 1371 aa14.39□□□□□ -0.11
VPS45-201ENST00000369128 CUL7Q14999 1698 aa14.39□□□□□ -0.11
VPS45-201ENST00000369128 GAPVD1Q14C86 1478 aa14.39□□□□□ -0.11
VPS45-201ENST00000369128 PBRM1Q86U86 1689 aa14.38□□□□□ -0.11
VPS45-201ENST00000369128 CLIP1P30622 1438 aa14.37□□□□□ -0.11
VPS45-201ENST00000369128 ZNF608Q9ULD9 1512 aaPredicted RBP14.35□□□□□ -0.11
VPS45-201ENST00000369128 IFT140Q96RY7 1462 aa14.34□□□□□ -0.11
VPS45-201ENST00000369128 AQRO60306 1485 aaKnown RBP eCLIP14.34□□□□□ -0.111e-6■■■■□ 24.5
VPS45-201ENST00000369128 RANGAP1P46060 587 aaPredicted RBP14.31□□□□□ -0.12
VPS45-201ENST00000369128 EIF4G3O43432 1585 aaKnown RBP14.31□□□□□ -0.12
VPS45-201ENST00000369128 CTTNBP2Q8WZ74 1663 aa14.29□□□□□ -0.12
VPS45-201ENST00000369128 ADAMTS12P58397 1594 aa14.28□□□□□ -0.12
VPS45-201ENST00000369128 ARAP1Q96P48 1450 aa14.28□□□□□ -0.12
VPS45-201ENST00000369128 ARHGAP35Q9NRY4 1499 aa14.26□□□□□ -0.13
VPS45-201ENST00000369128 VPS8Q8N3P4 1428 aa14.26□□□□□ -0.13
VPS45-201ENST00000369128 GRIN2BQ13224 1484 aa14.26□□□□□ -0.13
VPS45-201ENST00000369128 PPARGC1BQ86YN6 1023 aaKnown RBP14.25□□□□□ -0.13
VPS45-201ENST00000369128 PCGF6Q9BYE7 350 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms