RNA–Protein interactions for RNA: ENST00000473284.5

NEPRO-214, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 2,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-214ENST00000473284 NISCHQ9Y2I1 1504 aa25.98■■□□□ 1.75
NEPRO-214ENST00000473284 HRCP23327 699 aa22.75■■□□□ 1.23
NEPRO-214ENST00000473284 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
NEPRO-214ENST00000473284 MYO15BQ96JP2 1530 aa22.35■■□□□ 1.17
NEPRO-214ENST00000473284 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
NEPRO-214ENST00000473284 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
NEPRO-214ENST00000473284 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
NEPRO-214ENST00000473284 PCGF6Q9BYE7 350 aa22.13■■□□□ 1.13
NEPRO-214ENST00000473284 PPARGC1BQ86YN6 1023 aaKnown RBP22.05■■□□□ 1.12
NEPRO-214ENST00000473284 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
NEPRO-214ENST00000473284 PELP1Q8IZL8 1130 aaKnown RBP21.89■■□□□ 1.09
NEPRO-214ENST00000473284 CCDC180Q9P1Z9 1646 aa21.81■■□□□ 1.08
NEPRO-214ENST00000473284 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
NEPRO-214ENST00000473284 ZEB1P37275 1124 aaPredicted RBP21.51■■□□□ 1.03
NEPRO-214ENST00000473284 LOC105371045A0A1W2PR82 267 aa21.49■■□□□ 1.03
NEPRO-214ENST00000473284 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
NEPRO-214ENST00000473284 DCAF8L2P0C7V8 631 aa21.05■□□□□ 0.96
NEPRO-214ENST00000473284 MYT1Q01538 1121 aa21.05■□□□□ 0.96
NEPRO-214ENST00000473284 ABCC9O60706 1549 aa21.05■□□□□ 0.96
NEPRO-214ENST00000473284 ACIN1Q9UKV3 1341 aaKnown RBP20.94■□□□□ 0.94
NEPRO-214ENST00000473284 RSF1Q96T23 1441 aaPredicted RBP20.82■□□□□ 0.92
NEPRO-214ENST00000473284 NEUROD1Q13562 356 aa20.81■□□□□ 0.92
NEPRO-214ENST00000473284 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
NEPRO-214ENST00000473284 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
NEPRO-214ENST00000473284 CENPBP07199 599 aaPredicted RBP20.66■□□□□ 0.9
NEPRO-214ENST00000473284 GTF3C3Q9Y5Q9 886 aa20.65■□□□□ 0.9
NEPRO-214ENST00000473284 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
NEPRO-214ENST00000473284 DIEXFQ68CQ4 756 aaKnown RBP20.57■□□□□ 0.88
NEPRO-214ENST00000473284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.54■□□□□ 0.88
NEPRO-214ENST00000473284 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
NEPRO-214ENST00000473284 SCRIBQ14160 1630 aa20.45■□□□□ 0.86
NEPRO-214ENST00000473284 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
NEPRO-214ENST00000473284 EHMT2Q96KQ7 1210 aa20.31■□□□□ 0.84
NEPRO-214ENST00000473284 EIF4G1Q04637 1599 aaKnown RBP20.31■□□□□ 0.84
NEPRO-214ENST00000473284 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.84
NEPRO-214ENST00000473284 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
NEPRO-214ENST00000473284 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
NEPRO-214ENST00000473284 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.81
NEPRO-214ENST00000473284 WIZO95785 1651 aa20.14■□□□□ 0.81
NEPRO-214ENST00000473284 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
NEPRO-214ENST00000473284 TNIKQ9UKE5 1360 aa20.07■□□□□ 0.8
NEPRO-214ENST00000473284 MIER1Q8N108 512 aa20.05■□□□□ 0.8
NEPRO-214ENST00000473284 YTHDC1Q96MU7 727 aaKnown RBP20.02■□□□□ 0.8
NEPRO-214ENST00000473284 CLSPNQ9HAW4 1339 aa19.97■□□□□ 0.79
NEPRO-214ENST00000473284 NACADO15069 1562 aa19.97■□□□□ 0.79
NEPRO-214ENST00000473284 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
NEPRO-214ENST00000473284 EEA1Q15075 1411 aa19.95■□□□□ 0.78
NEPRO-214ENST00000473284 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
NEPRO-214ENST00000473284 TTBK1Q5TCY1 1321 aaPredicted RBP19.87■□□□□ 0.77
NEPRO-214ENST00000473284 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
NEPRO-214ENST00000473284 SOGA1O94964 1423 aa19.86■□□□□ 0.77
NEPRO-214ENST00000473284 GOLGA3Q08378 1498 aa19.81■□□□□ 0.76
NEPRO-214ENST00000473284 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
NEPRO-214ENST00000473284 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
NEPRO-214ENST00000473284 SUPT16HQ9Y5B9 1047 aaKnown RBP19.77■□□□□ 0.76
NEPRO-214ENST00000473284 RUSC2Q8N2Y8 1516 aa19.73■□□□□ 0.75
NEPRO-214ENST00000473284 UBTFP17480 764 aaKnown RBP19.68■□□□□ 0.74
NEPRO-214ENST00000473284 KIF21BO75037 1637 aa19.68■□□□□ 0.74
NEPRO-214ENST00000473284 ANP32EQ9BTT0 268 aa19.67■□□□□ 0.74
NEPRO-214ENST00000473284 TSHZ2Q9NRE2 1034 aa19.67■□□□□ 0.74
NEPRO-214ENST00000473284 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
NEPRO-214ENST00000473284 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
NEPRO-214ENST00000473284 VPS8Q8N3P4 1428 aa19.63■□□□□ 0.73
NEPRO-214ENST00000473284 CEP164Q9UPV0 1460 aa19.63■□□□□ 0.73
NEPRO-214ENST00000473284 CLIP1P30622 1438 aa19.59■□□□□ 0.73
NEPRO-214ENST00000473284 BAZ1BQ9UIG0 1483 aaKnown RBP19.56■□□□□ 0.72
NEPRO-214ENST00000473284 DHX57Q6P158 1386 aaKnown RBP19.54■□□□□ 0.72
NEPRO-214ENST00000473284 BCL11AQ9H165 835 aa19.5■□□□□ 0.71
NEPRO-214ENST00000473284 SYNJ1O43426 1573 aa19.42■□□□□ 0.7
NEPRO-214ENST00000473284 CUX2O14529 1486 aa19.4■□□□□ 0.7
NEPRO-214ENST00000473284 APLP2Q06481 763 aa19.39■□□□□ 0.69
NEPRO-214ENST00000473284 RAPGEF2Q9Y4G8 1499 aa19.36■□□□□ 0.69
NEPRO-214ENST00000473284 RRBP1Q9P2E9 1410 aaKnown RBP19.32■□□□□ 0.68
NEPRO-214ENST00000473284 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
NEPRO-214ENST00000473284 ARAP1Q96P48 1450 aa19.25■□□□□ 0.67
NEPRO-214ENST00000473284 UNC13AQ9UPW8 1703 aa19.23■□□□□ 0.67
NEPRO-214ENST00000473284 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
NEPRO-214ENST00000473284 KCNH8Q96L42 1107 aa19.21■□□□□ 0.67
NEPRO-214ENST00000473284 RBM19Q9Y4C8 960 aaKnown RBP19.19■□□□□ 0.66
NEPRO-214ENST00000473284 FKBP8Q14318 412 aa19.18■□□□□ 0.66
NEPRO-214ENST00000473284 MAPKBP1O60336 1514 aa19.16■□□□□ 0.66
NEPRO-214ENST00000473284 PRXQ9BXM0 1461 aa19.15■□□□□ 0.66
NEPRO-214ENST00000473284 KANK4Q5T7N3 995 aaPredicted RBP19.15■□□□□ 0.66
NEPRO-214ENST00000473284 TOP2BQ02880 1626 aa19.14■□□□□ 0.66
NEPRO-214ENST00000473284 BCANQ96GW7 911 aa19.13■□□□□ 0.65
NEPRO-214ENST00000473284 CCNB3Q8WWL7 1395 aa19.12■□□□□ 0.65
NEPRO-214ENST00000473284 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
NEPRO-214ENST00000473284 CCER2I3L3R5 266 aa19.05■□□□□ 0.64
NEPRO-214ENST00000473284 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
NEPRO-214ENST00000473284 NEFLP07196 543 aa19.05■□□□□ 0.64
NEPRO-214ENST00000473284 RAB3GAP2Q9H2M9 1393 aa19.04■□□□□ 0.64
NEPRO-214ENST00000473284 WDR97A6NE52 1622 aa19.02■□□□□ 0.64
NEPRO-214ENST00000473284 MSH5O43196 834 aa19.02■□□□□ 0.63
NEPRO-214ENST00000473284 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
NEPRO-214ENST00000473284 RANGAP1P46060 587 aaPredicted RBP19■□□□□ 0.63
NEPRO-214ENST00000473284 MAP3K1Q13233 1512 aa18.98■□□□□ 0.63
NEPRO-214ENST00000473284 DDX10Q13206 875 aaKnown RBP18.97■□□□□ 0.63
NEPRO-214ENST00000473284 BICRAQ9NZM4 1560 aa18.97■□□□□ 0.63
NEPRO-214ENST00000473284 TIMELESSQ9UNS1 1208 aa18.97■□□□□ 0.63
NEPRO-214ENST00000473284 ATAD2BQ9ULI0 1458 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms