RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 AEBP2Q6ZN18 517 aaPredicted RBP27.49■■□□□ 1.99
VPS45-204ENST00000460366 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
VPS45-204ENST00000460366 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
VPS45-204ENST00000460366 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
VPS45-204ENST00000460366 PHF23Q9BUL5 403 aaPredicted RBP23.23■■□□□ 1.31
VPS45-204ENST00000460366 FOXD1Q16676 465 aa21.73■■□□□ 1.07
VPS45-204ENST00000460366 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
VPS45-204ENST00000460366 CCDC180Q9P1Z9 1646 aa20.94■□□□□ 0.94
VPS45-204ENST00000460366 PPP6R1Q9UPN7 881 aa20.63■□□□□ 0.89
VPS45-204ENST00000460366 ADRA2BP18089 450 aa20.56■□□□□ 0.88
VPS45-204ENST00000460366 PIAS4Q8N2W9 510 aaPredicted RBP20.36■□□□□ 0.85
VPS45-204ENST00000460366 ABCC9O60706 1549 aa20.29■□□□□ 0.84
VPS45-204ENST00000460366 MSH5O43196 834 aa20.11■□□□□ 0.81
VPS45-204ENST00000460366 ZCCHC6Q5VYS8 1495 aaKnown RBP19.77■□□□□ 0.76
VPS45-204ENST00000460366 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
VPS45-204ENST00000460366 MYO15BQ96JP2 1530 aa19.7■□□□□ 0.74
VPS45-204ENST00000460366 NACADO15069 1562 aa19.7■□□□□ 0.74
VPS45-204ENST00000460366 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
VPS45-204ENST00000460366 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
VPS45-204ENST00000460366 POTEDQ86YR6 584 aa19.09■□□□□ 0.65
VPS45-204ENST00000460366 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.65
VPS45-204ENST00000460366 SCRIBQ14160 1630 aa19.07■□□□□ 0.64
VPS45-204ENST00000460366 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.64
VPS45-204ENST00000460366 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
VPS45-204ENST00000460366 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
VPS45-204ENST00000460366 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
VPS45-204ENST00000460366 SCAF1Q9H7N4 1312 aaKnown RBP18.69■□□□□ 0.58
VPS45-204ENST00000460366 PPP4R3CPQ6ZMV5 832 aa18.67■□□□□ 0.58
VPS45-204ENST00000460366 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
VPS45-204ENST00000460366 EIF4G1Q04637 1599 aaKnown RBP18.5■□□□□ 0.55
VPS45-204ENST00000460366 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
VPS45-204ENST00000460366 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
VPS45-204ENST00000460366 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
VPS45-204ENST00000460366 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
VPS45-204ENST00000460366 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
VPS45-204ENST00000460366 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
VPS45-204ENST00000460366 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
VPS45-204ENST00000460366 NCAPD3P42695 1498 aa18.2■□□□□ 0.5
VPS45-204ENST00000460366 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
VPS45-204ENST00000460366 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
VPS45-204ENST00000460366 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
VPS45-204ENST00000460366 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
VPS45-204ENST00000460366 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
VPS45-204ENST00000460366 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
VPS45-204ENST00000460366 HOXD11P31277 338 aaPredicted RBP18.01■□□□□ 0.47
VPS45-204ENST00000460366 WIZO95785 1651 aa18■□□□□ 0.47
VPS45-204ENST00000460366 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
VPS45-204ENST00000460366 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
VPS45-204ENST00000460366 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
VPS45-204ENST00000460366 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
VPS45-204ENST00000460366 KCNA4P22459 653 aa17.82■□□□□ 0.44
VPS45-204ENST00000460366 SUPT5HO00267 1087 aaKnown RBP17.8■□□□□ 0.44
VPS45-204ENST00000460366 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
VPS45-204ENST00000460366 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
VPS45-204ENST00000460366 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
VPS45-204ENST00000460366 LAMC3Q9Y6N6 1575 aa17.64■□□□□ 0.41
VPS45-204ENST00000460366 DNAJC5Q9H3Z4 198 aa17.63■□□□□ 0.41
VPS45-204ENST00000460366 NESP48681 1621 aa17.61■□□□□ 0.41
VPS45-204ENST00000460366 CFTRP13569 1480 aa17.6■□□□□ 0.41
VPS45-204ENST00000460366 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
VPS45-204ENST00000460366 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
VPS45-204ENST00000460366 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
VPS45-204ENST00000460366 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
VPS45-204ENST00000460366 PRDM2Q13029 1718 aa17.36■□□□□ 0.37
VPS45-204ENST00000460366 KIF21AQ7Z4S6 1674 aa17.35■□□□□ 0.37
VPS45-204ENST00000460366 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
VPS45-204ENST00000460366 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
VPS45-204ENST00000460366 CUX2O14529 1486 aa17.28■□□□□ 0.36
VPS45-204ENST00000460366 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
VPS45-204ENST00000460366 WDR62O43379 1518 aa17.25■□□□□ 0.35
VPS45-204ENST00000460366 ABCC8Q09428 1581 aa17.24■□□□□ 0.35
VPS45-204ENST00000460366 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
VPS45-204ENST00000460366 TOPBP1Q92547 1522 aa17.17■□□□□ 0.34
VPS45-204ENST00000460366 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
VPS45-204ENST00000460366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
VPS45-204ENST00000460366 CUX1P39880 1505 aa17.1■□□□□ 0.33
VPS45-204ENST00000460366 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
VPS45-204ENST00000460366 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
VPS45-204ENST00000460366 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
VPS45-204ENST00000460366 POLA1P09884 1462 aaPredicted RBP17.03■□□□□ 0.32
VPS45-204ENST00000460366 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
VPS45-204ENST00000460366 TOP2BQ02880 1626 aa17■□□□□ 0.31
VPS45-204ENST00000460366 SOGA1O94964 1423 aa17■□□□□ 0.31
VPS45-204ENST00000460366 BIVM-ERCC5R4GMW8 1640 aa16.98■□□□□ 0.31
VPS45-204ENST00000460366 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
VPS45-204ENST00000460366 C1QBPQ07021 282 aaKnown RBP16.96■□□□□ 0.31
VPS45-204ENST00000460366 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
VPS45-204ENST00000460366 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
VPS45-204ENST00000460366 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
VPS45-204ENST00000460366 ABCA10Q8WWZ4 1543 aa16.9■□□□□ 0.3
VPS45-204ENST00000460366 ZNF608Q9ULD9 1512 aaPredicted RBP16.89■□□□□ 0.29
VPS45-204ENST00000460366 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
VPS45-204ENST00000460366 WDR97A6NE52 1622 aa16.87■□□□□ 0.29
VPS45-204ENST00000460366 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
VPS45-204ENST00000460366 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.297e-8■■■■□ 21.3
VPS45-204ENST00000460366 TRIM41Q8WV44 630 aa16.84■□□□□ 0.29
VPS45-204ENST00000460366 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
VPS45-204ENST00000460366 EIF4G3O43432 1585 aaKnown RBP16.8■□□□□ 0.28
VPS45-204ENST00000460366 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
VPS45-204ENST00000460366 GRIN2BQ13224 1484 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms