RNA–Protein interactions for RNA: ENST00000472637.5

NEPRO-211, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 1 (best)

Gene NEPRO, Length 2,179 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-211ENST00000472637 NISCHQ9Y2I1 1504 aa31.3■■■□□ 2.6
NEPRO-211ENST00000472637 CCDC180Q9P1Z9 1646 aa26.89■■□□□ 1.89
NEPRO-211ENST00000472637 ZCCHC6Q5VYS8 1495 aaKnown RBP26.39■■□□□ 1.81
NEPRO-211ENST00000472637 SHROOM4Q9ULL8 1493 aa26.16■■□□□ 1.78
NEPRO-211ENST00000472637 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.73
NEPRO-211ENST00000472637 DCAF1Q9Y4B6 1507 aa25.75■■□□□ 1.71
NEPRO-211ENST00000472637 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
NEPRO-211ENST00000472637 ABCC9O60706 1549 aa25.2■■□□□ 1.62
NEPRO-211ENST00000472637 MYO15BQ96JP2 1530 aa25.19■■□□□ 1.62
NEPRO-211ENST00000472637 SCRIBQ14160 1630 aa25.02■■□□□ 1.6
NEPRO-211ENST00000472637 NACADO15069 1562 aa24.95■■□□□ 1.58
NEPRO-211ENST00000472637 RB1CC1Q8TDY2 1594 aa24.62■■□□□ 1.53
NEPRO-211ENST00000472637 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
NEPRO-211ENST00000472637 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
NEPRO-211ENST00000472637 CECR2Q9BXF3 1484 aa24.41■■□□□ 1.5
NEPRO-211ENST00000472637 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
NEPRO-211ENST00000472637 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
NEPRO-211ENST00000472637 WIZO95785 1651 aa24.13■■□□□ 1.45
NEPRO-211ENST00000472637 BAZ1AQ9NRL2 1556 aaPredicted RBP24.06■■□□□ 1.44
NEPRO-211ENST00000472637 BICRAQ9NZM4 1560 aa24.01■■□□□ 1.43
NEPRO-211ENST00000472637 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
NEPRO-211ENST00000472637 SMARCA4P51532 1647 aa23.94■■□□□ 1.42
NEPRO-211ENST00000472637 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
NEPRO-211ENST00000472637 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
NEPRO-211ENST00000472637 TRIM41Q8WV44 630 aa23.75■■□□□ 1.39
NEPRO-211ENST00000472637 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
NEPRO-211ENST00000472637 CCDC88BA6NC98 1476 aa23.63■■□□□ 1.37
NEPRO-211ENST00000472637 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
NEPRO-211ENST00000472637 PEG3Q9GZU2 1588 aa23.56■■□□□ 1.36
NEPRO-211ENST00000472637 FAM9AQ8IZU1 332 aaPredicted RBP23.48■■□□□ 1.35
NEPRO-211ENST00000472637 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
NEPRO-211ENST00000472637 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
NEPRO-211ENST00000472637 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
NEPRO-211ENST00000472637 EHMT2Q96KQ7 1210 aa23.24■■□□□ 1.31
NEPRO-211ENST00000472637 PCGF6Q9BYE7 350 aa23.21■■□□□ 1.31
NEPRO-211ENST00000472637 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
NEPRO-211ENST00000472637 SOGA1O94964 1423 aa23.06■■□□□ 1.28
NEPRO-211ENST00000472637 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
NEPRO-211ENST00000472637 HMGXB3Q12766 1538 aa23.05■■□□□ 1.28
NEPRO-211ENST00000472637 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
NEPRO-211ENST00000472637 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
NEPRO-211ENST00000472637 TRIM26Q12899 539 aaPredicted RBP22.93■■□□□ 1.26
NEPRO-211ENST00000472637 HRCP23327 699 aa22.9■■□□□ 1.26
NEPRO-211ENST00000472637 EEA1Q15075 1411 aa22.88■■□□□ 1.25
NEPRO-211ENST00000472637 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
NEPRO-211ENST00000472637 TOP2BQ02880 1626 aa22.77■■□□□ 1.24
NEPRO-211ENST00000472637 CFTRP13569 1480 aa22.76■■□□□ 1.23
NEPRO-211ENST00000472637 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
NEPRO-211ENST00000472637 TNIKQ9UKE5 1360 aa22.73■■□□□ 1.23
NEPRO-211ENST00000472637 BIVM-ERCC5R4GMW8 1640 aa22.71■■□□□ 1.23
NEPRO-211ENST00000472637 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
NEPRO-211ENST00000472637 GOLGA3Q08378 1498 aa22.68■■□□□ 1.22
NEPRO-211ENST00000472637 UBTFP17480 764 aaKnown RBP22.67■■□□□ 1.22
NEPRO-211ENST00000472637 PPARGC1BQ86YN6 1023 aaKnown RBP22.66■■□□□ 1.22
NEPRO-211ENST00000472637 CUX1P39880 1505 aa22.65■■□□□ 1.22
NEPRO-211ENST00000472637 KIF21BO75037 1637 aa22.62■■□□□ 1.21
NEPRO-211ENST00000472637 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
NEPRO-211ENST00000472637 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
NEPRO-211ENST00000472637 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
NEPRO-211ENST00000472637 RAPGEF2Q9Y4G8 1499 aa22.53■■□□□ 1.2
NEPRO-211ENST00000472637 PRXQ9BXM0 1461 aa22.41■■□□□ 1.18
NEPRO-211ENST00000472637 CLIP1P30622 1438 aa22.39■■□□□ 1.17
NEPRO-211ENST00000472637 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
NEPRO-211ENST00000472637 TTBK1Q5TCY1 1321 aaPredicted RBP22.35■■□□□ 1.17
NEPRO-211ENST00000472637 ERICH3Q5RHP9 1530 aa22.35■■□□□ 1.17
NEPRO-211ENST00000472637 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
NEPRO-211ENST00000472637 NESP48681 1621 aa22.34■■□□□ 1.17
NEPRO-211ENST00000472637 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
NEPRO-211ENST00000472637 DNAJC5BQ9UF47 199 aa22.29■■□□□ 1.16
NEPRO-211ENST00000472637 RANGAP1P46060 587 aaPredicted RBP22.29■■□□□ 1.16
NEPRO-211ENST00000472637 CUX2O14529 1486 aa22.26■■□□□ 1.15
NEPRO-211ENST00000472637 VPS8Q8N3P4 1428 aa22.24■■□□□ 1.15
NEPRO-211ENST00000472637 IGF1RP08069 1367 aa22.22■■□□□ 1.15
NEPRO-211ENST00000472637 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
NEPRO-211ENST00000472637 LAMC3Q9Y6N6 1575 aa22.17■■□□□ 1.14
NEPRO-211ENST00000472637 ZEB1P37275 1124 aaPredicted RBP22.16■■□□□ 1.14
NEPRO-211ENST00000472637 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
NEPRO-211ENST00000472637 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
NEPRO-211ENST00000472637 RAD54L2Q9Y4B4 1467 aa22.12■■□□□ 1.13
NEPRO-211ENST00000472637 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
NEPRO-211ENST00000472637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.09■■□□□ 1.13
NEPRO-211ENST00000472637 CARMIL1Q5VZK9 1371 aa22.08■■□□□ 1.13
NEPRO-211ENST00000472637 URB2Q14146 1524 aaKnown RBP22.07■■□□□ 1.12
NEPRO-211ENST00000472637 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
NEPRO-211ENST00000472637 ARHGAP35Q9NRY4 1499 aa22.03■■□□□ 1.12
NEPRO-211ENST00000472637 APLP2Q06481 763 aa22.01■■□□□ 1.11
NEPRO-211ENST00000472637 PDS5BQ9NTI5 1447 aa22■■□□□ 1.11
NEPRO-211ENST00000472637 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
NEPRO-211ENST00000472637 CCER1Q8TC90 406 aaPredicted RBP21.97■■□□□ 1.11
NEPRO-211ENST00000472637 WDR97A6NE52 1622 aa21.93■■□□□ 1.1
NEPRO-211ENST00000472637 KANK4Q5T7N3 995 aaPredicted RBP21.91■■□□□ 1.1
NEPRO-211ENST00000472637 TDRD9Q8NDG6 1382 aaKnown RBP21.86■■□□□ 1.09
NEPRO-211ENST00000472637 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
NEPRO-211ENST00000472637 CUL7Q14999 1698 aa21.85■■□□□ 1.09
NEPRO-211ENST00000472637 ABCA5Q8WWZ7 1642 aa21.84■■□□□ 1.09
NEPRO-211ENST00000472637 GAPVD1Q14C86 1478 aa21.79■■□□□ 1.08
NEPRO-211ENST00000472637 TARBP1Q13395 1621 aaKnown RBP21.79■■□□□ 1.08
NEPRO-211ENST00000472637 P3H3Q8IVL6 736 aa21.75■■□□□ 1.07
NEPRO-211ENST00000472637 CTTNBP2Q8WZ74 1663 aa21.74■■□□□ 1.07
NEPRO-211ENST00000472637 MRC2Q9UBG0 1479 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms