Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 SH3YL1-218ENST00000472861 441 ntTSL 37.46□□□□□ -1.224e-8■■■■□ 20.8
CSTF2TQ9H0L4 SH3YL1-212ENST00000462719 569 ntTSL 46.36□□□□□ -1.394e-8■■■■□ 20.8
CSTF2TQ9H0L4 SH3YL1-207ENST00000415368 494 ntTSL 35.91□□□□□ -1.464e-8■■■■□ 20.8
CSTF2TQ9H0L4 NR5A1-203ENST00000455734 826 ntTSL 313.67□□□□□ -0.226e-7■■■■□ 20.8
CSTF2TQ9H0L4 NEU4-214ENST00000476542 536 ntTSL 219.79■□□□□ 0.762e-9■■■■□ 20.8
CSTF2TQ9H0L4 CCNH-208ENST00000510921 549 ntTSL 45.36□□□□□ -1.551e-8■■■■□ 20.8
CSTF2TQ9H0L4 CCNH-205ENST00000505587 1940 ntTSL 25.02□□□□□ -1.611e-8■■■■□ 20.8
CSTF2TQ9H0L4 GRB10-212ENST00000439044 733 ntTSL 520.47■□□□□ 0.872e-7■■■■□ 20.8
CSTF2TQ9H0L4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.63■□□□□ 0.572e-7■■■■□ 20.8
CSTF2TQ9H0L4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.11■□□□□ 0.492e-7■■■■□ 20.8
CSTF2TQ9H0L4 SPPL2B-206ENST00000593243 551 ntTSL 414.62□□□□□ -0.078e-8■■■■□ 20.8
CSTF2TQ9H0L4 NEDD4L-232ENST00000591579 144 ntTSL 1 (best)12.47□□□□□ -0.411e-6■■■■□ 20.8
CSTF2TQ9H0L4 NEDD4L-231ENST00000590694 165 ntTSL 57.62□□□□□ -1.191e-6■■■■□ 20.8
CSTF2TQ9H0L4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.73■□□□□ 0.438e-8■■■■□ 20.7
CSTF2TQ9H0L4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.378e-8■■■■□ 20.7
CSTF2TQ9H0L4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.16■□□□□ 0.348e-8■■■■□ 20.7
CSTF2TQ9H0L4 GPX4-209ENST00000593032 583 ntTSL 317.01■□□□□ 0.318e-8■■■■□ 20.7
CSTF2TQ9H0L4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.228e-8■■■■□ 20.7
CSTF2TQ9H0L4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.33□□□□□ -0.128e-8■■■■□ 20.7
CSTF2TQ9H0L4 PEPD-210ENST00000591968 943 ntTSL 214.4□□□□□ -0.15e-6■■■■□ 20.7
CSTF2TQ9H0L4 MTA1-216ENST00000498644 871 ntTSL 215.81■□□□□ 0.129e-7■■■■□ 20.7
CSTF2TQ9H0L4 IGF2BP3-210ENST00000476938 500 ntTSL 214.99□□□□□ -0.016e-8■■■■□ 20.7
CSTF2TQ9H0L4 IGF2BP3-206ENST00000468005 2948 ntTSL 513.09□□□□□ -0.316e-8■■■■□ 20.7
CSTF2TQ9H0L4 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.383e-7■■■■□ 20.7
CSTF2TQ9H0L4 MCF2L-206ENST00000397021 576 ntTSL 2 BASIC9.05□□□□□ -0.964e-6■■■■□ 20.7
CSTF2TQ9H0L4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.44□□□□□ -0.262e-6■■■■□ 20.7
CSTF2TQ9H0L4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.82■□□□□ 0.67e-9■■■■□ 20.7
CSTF2TQ9H0L4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.197e-9■■■■□ 20.7
CSTF2TQ9H0L4 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.277e-9■■■■□ 20.7
CSTF2TQ9H0L4 TNIK-206ENST00000460047 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.777e-9■■■■□ 20.7
CSTF2TQ9H0L4 TNIK-214ENST00000488470 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.847e-9■■■■□ 20.7
CSTF2TQ9H0L4 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.917e-9■■■■□ 20.7
CSTF2TQ9H0L4 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.917e-9■■■■□ 20.7
CSTF2TQ9H0L4 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.967e-9■■■■□ 20.7
CSTF2TQ9H0L4 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.157e-9■■■■□ 20.7
CSTF2TQ9H0L4 GRIN2C-205ENST00000584496 1984 ntTSL 1 (best)20.19■□□□□ 0.824e-8■■■■□ 20.7
CSTF2TQ9H0L4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.231e-11■■■■□ 20.7
CSTF2TQ9H0L4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.114e-8■■■■□ 20.7
CSTF2TQ9H0L4 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.351e-11■■■■□ 20.7
CSTF2TQ9H0L4 UBFD1-205ENST00000566136 2485 ntTSL 210.87□□□□□ -0.671e-11■■■■□ 20.7
CSTF2TQ9H0L4 UBFD1-203ENST00000564106 587 ntTSL 28.75□□□□□ -1.011e-11■■■■□ 20.7
CSTF2TQ9H0L4 UBFD1-202ENST00000563366 709 ntTSL 38.67□□□□□ -1.021e-11■■■■□ 20.7
CSTF2TQ9H0L4 UBFD1-204ENST00000565634 724 ntTSL 25.88□□□□□ -1.471e-11■■■■□ 20.7
CSTF2TQ9H0L4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.37□□□□□ -1.551e-11■■■■□ 20.7
CSTF2TQ9H0L4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.49□□□□□ -1.691e-11■■■■□ 20.7
CSTF2TQ9H0L4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.781e-11■■■■□ 20.7
CSTF2TQ9H0L4 GNPTG-209ENST00000534197 420 ntTSL 320.84■□□□□ 0.932e-7■■■■□ 20.7
CSTF2TQ9H0L4 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.81□□□□□ -0.369e-7■■■■□ 20.7
CSTF2TQ9H0L4 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.369e-7■■■■□ 20.7
CSTF2TQ9H0L4 NR2C2-210ENST00000475707 3308 ntTSL 27.8□□□□□ -1.162e-7■■■■□ 20.7
CSTF2TQ9H0L4 LMBR1-210ENST00000434503 930 ntTSL 519.61■□□□□ 0.733e-8■■■■□ 20.7
CSTF2TQ9H0L4 LMBR1-213ENST00000454132 2922 ntTSL 218.58■□□□□ 0.563e-8■■■■□ 20.7
CSTF2TQ9H0L4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.56■□□□□ 0.083e-8■■■■□ 20.7
CSTF2TQ9H0L4 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.253e-8■■■■□ 20.7
CSTF2TQ9H0L4 LMBR1-204ENST00000415428 3457 ntTSL 1 (best)5.64□□□□□ -1.513e-8■■■■□ 20.7
CSTF2TQ9H0L4 TPCN2-204ENST00000535009 2175 ntTSL 220.47■□□□□ 0.871e-6■■■■□ 20.7
CSTF2TQ9H0L4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.181e-7■■■■□ 20.7
CSTF2TQ9H0L4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19■□□□□ 0.631e-7■■■■□ 20.7
CSTF2TQ9H0L4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.77■□□□□ 0.61e-7■■■■□ 20.7
CSTF2TQ9H0L4 RNASET2-204ENST00000421787 1924 ntTSL 218.29■□□□□ 0.521e-7■■■■□ 20.7
CSTF2TQ9H0L4 RNASET2-201ENST00000028008 1220 ntTSL 517.02■□□□□ 0.321e-7■■■■□ 20.7
CSTF2TQ9H0L4 RNASET2-207ENST00000478180 963 ntTSL 516.74■□□□□ 0.271e-7■■■■□ 20.7
CSTF2TQ9H0L4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.081e-7■■■■□ 20.7
CSTF2TQ9H0L4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.751e-7■■■■□ 20.7
CSTF2TQ9H0L4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.062e-6■■■■□ 20.7
CSTF2TQ9H0L4 NEU4-207ENST00000420288 845 ntTSL 318.1■□□□□ 0.492e-9■■■■□ 20.7
CSTF2TQ9H0L4 NEU4-209ENST00000426032 676 ntTSL 315.63■□□□□ 0.092e-9■■■■□ 20.7
CSTF2TQ9H0L4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.721e-6■■■■□ 20.7
CSTF2TQ9H0L4 SMCO4-203ENST00000526869 374 ntTSL 1 (best)18.37■□□□□ 0.531e-6■■■■□ 20.7
CSTF2TQ9H0L4 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.956e-9■■■■□ 20.7
CSTF2TQ9H0L4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.314e-7■■■■□ 20.7
CSTF2TQ9H0L4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.13■□□□□ 0.014e-7■■■■□ 20.7
CSTF2TQ9H0L4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.23□□□□□ -0.294e-7■■■■□ 20.7
CSTF2TQ9H0L4 CHID1-210ENST00000526714 976 ntTSL 59.78□□□□□ -0.844e-7■■■■□ 20.7
CSTF2TQ9H0L4 RPH3AL-215ENST00000574953 692 ntAPPRIS ALT2 TSL 514.72□□□□□ -0.056e-7■■■■□ 20.6
CSTF2TQ9H0L4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.66■□□□□ 0.748e-7■■■■□ 20.6
CSTF2TQ9H0L4 SGMS1-209ENST00000609445 594 ntTSL 415.13■□□□□ 0.018e-7■■■■□ 20.6
CSTF2TQ9H0L4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.88■□□□□ 0.939e-9■■■■□ 20.6
CSTF2TQ9H0L4 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC12.13□□□□□ -0.473e-6■■■■□ 20.6
CSTF2TQ9H0L4 CRYBB2P1-201ENST00000354451 1560 ntTSL 1 (best)12.05□□□□□ -0.483e-6■■■■□ 20.6
CSTF2TQ9H0L4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.181e-6■■■■□ 20.6
CSTF2TQ9H0L4 TRADD-204ENST00000566104 669 ntTSL 218.79■□□□□ 0.61e-6■■■■□ 20.6
CSTF2TQ9H0L4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.49□□□□□ -0.091e-6■■■■□ 20.6
CSTF2TQ9H0L4 TOLLIP-209ENST00000528719 669 ntTSL 423.24■■□□□ 1.311e-6■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.35■□□□□ 0.537e-7■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-214ENST00000490063 510 ntTSL 516.56■□□□□ 0.247e-7■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-209ENST00000471358 559 ntTSL 216.19■□□□□ 0.181e-6■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-208ENST00000471308 2087 ntTSL 215.5■□□□□ 0.071e-6■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.051e-6■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-217ENST00000497653 559 ntTSL 415.18■□□□□ 0.027e-7■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.111e-6■■■■□ 20.6
CSTF2TQ9H0L4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.32□□□□□ -0.128e-7■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-211ENST00000483411 563 ntTSL 412.84□□□□□ -0.351e-6■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-206ENST00000466412 837 ntTSL 412.84□□□□□ -0.357e-7■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-207ENST00000468324 704 ntTSL 312.81□□□□□ -0.367e-7■■■■□ 20.6
CSTF2TQ9H0L4 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC12.11□□□□□ -0.476e-7■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-204ENST00000461544 562 ntTSL 412.1□□□□□ -0.471e-6■■■■□ 20.6
CSTF2TQ9H0L4 PCBP4-213ENST00000489595 539 ntTSL 410.92□□□□□ -0.668e-7■■■■□ 20.6
CSTF2TQ9H0L4 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC7.93□□□□□ -1.141e-6■■■■□ 20.6
CSTF2TQ9H0L4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.391e-6■■■■□ 20.6
Retrieved 100 of 19,151 protein–RNA pairs in 141 ms