RNA–Protein interactions for RNA: ENST00000472861.1

SH3YL1-218, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 3

Gene SH3YL1, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-218ENST00000472861 NISCHQ9Y2I1 1504 aa20.6■□□□□ 0.89
SH3YL1-218ENST00000472861 ABCC9O60706 1549 aa20■□□□□ 0.79
SH3YL1-218ENST00000472861 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
SH3YL1-218ENST00000472861 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
SH3YL1-218ENST00000472861 CCDC180Q9P1Z9 1646 aa18.86■□□□□ 0.61
SH3YL1-218ENST00000472861 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
SH3YL1-218ENST00000472861 RB1CC1Q8TDY2 1594 aa18.53■□□□□ 0.56
SH3YL1-218ENST00000472861 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
SH3YL1-218ENST00000472861 NACADO15069 1562 aa18.17■□□□□ 0.5
SH3YL1-218ENST00000472861 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
SH3YL1-218ENST00000472861 AEBP2Q6ZN18 517 aaPredicted RBP18.14■□□□□ 0.49
SH3YL1-218ENST00000472861 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
SH3YL1-218ENST00000472861 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
SH3YL1-218ENST00000472861 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
SH3YL1-218ENST00000472861 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
SH3YL1-218ENST00000472861 SHROOM4Q9ULL8 1493 aa17.72■□□□□ 0.43
SH3YL1-218ENST00000472861 CUX2O14529 1486 aa17.7■□□□□ 0.42
SH3YL1-218ENST00000472861 EIF4G1Q04637 1599 aaKnown RBP17.69■□□□□ 0.42
SH3YL1-218ENST00000472861 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
SH3YL1-218ENST00000472861 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
SH3YL1-218ENST00000472861 ERCC6Q03468 1493 aa17.33■□□□□ 0.37
SH3YL1-218ENST00000472861 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
SH3YL1-218ENST00000472861 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.31
SH3YL1-218ENST00000472861 NESP48681 1621 aa16.88■□□□□ 0.29
SH3YL1-218ENST00000472861 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
SH3YL1-218ENST00000472861 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
SH3YL1-218ENST00000472861 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
SH3YL1-218ENST00000472861 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
SH3YL1-218ENST00000472861 SMARCA2P51531 1590 aa16.65■□□□□ 0.26
SH3YL1-218ENST00000472861 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
SH3YL1-218ENST00000472861 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
SH3YL1-218ENST00000472861 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
SH3YL1-218ENST00000472861 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
SH3YL1-218ENST00000472861 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
SH3YL1-218ENST00000472861 RIMBP3CA6NJZ7 1639 aa16.56■□□□□ 0.24
SH3YL1-218ENST00000472861 RIMBP3BA6NNM3 1639 aa16.56■□□□□ 0.24
SH3YL1-218ENST00000472861 RIMBP3Q9UFD9 1639 aa16.56■□□□□ 0.24
SH3YL1-218ENST00000472861 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
SH3YL1-218ENST00000472861 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
SH3YL1-218ENST00000472861 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
SH3YL1-218ENST00000472861 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
SH3YL1-218ENST00000472861 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
SH3YL1-218ENST00000472861 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
SH3YL1-218ENST00000472861 ILDR1Q86SU0 546 aaPredicted RBP16.43■□□□□ 0.22
SH3YL1-218ENST00000472861 WDR62O43379 1518 aa16.43■□□□□ 0.22
SH3YL1-218ENST00000472861 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
SH3YL1-218ENST00000472861 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
SH3YL1-218ENST00000472861 SMARCA4P51532 1647 aa16.24■□□□□ 0.19
SH3YL1-218ENST00000472861 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
SH3YL1-218ENST00000472861 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
SH3YL1-218ENST00000472861 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
SH3YL1-218ENST00000472861 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
SH3YL1-218ENST00000472861 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.16
SH3YL1-218ENST00000472861 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
SH3YL1-218ENST00000472861 ZNF608Q9ULD9 1512 aaPredicted RBP15.98■□□□□ 0.15
SH3YL1-218ENST00000472861 IFT140Q96RY7 1462 aa15.9■□□□□ 0.14
SH3YL1-218ENST00000472861 CFTRP13569 1480 aa15.85■□□□□ 0.13
SH3YL1-218ENST00000472861 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
SH3YL1-218ENST00000472861 KDM4FA0A1W2PPD8 638 aa15.82■□□□□ 0.12
SH3YL1-218ENST00000472861 FBLN2P98095 1184 aa15.82■□□□□ 0.12
SH3YL1-218ENST00000472861 CHD1O14646 1710 aa15.8■□□□□ 0.12
SH3YL1-218ENST00000472861 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
SH3YL1-218ENST00000472861 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.1
SH3YL1-218ENST00000472861 CLASP1Q7Z460 1538 aa15.69■□□□□ 0.1
SH3YL1-218ENST00000472861 PLPPR3Q6T4P5 718 aa15.64■□□□□ 0.09
SH3YL1-218ENST00000472861 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
SH3YL1-218ENST00000472861 FBXO41Q8TF61 875 aa15.62■□□□□ 0.09
SH3YL1-218ENST00000472861 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
SH3YL1-218ENST00000472861 WIZO95785 1651 aa15.55■□□□□ 0.08
SH3YL1-218ENST00000472861 SYNJ1O43426 1573 aa15.55■□□□□ 0.08
SH3YL1-218ENST00000472861 CHMP7Q8WUX9 453 aaPredicted RBP15.55■□□□□ 0.08
SH3YL1-218ENST00000472861 ERCC6L2Q5T890 1561 aa15.54■□□□□ 0.08
SH3YL1-218ENST00000472861 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
SH3YL1-218ENST00000472861 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
SH3YL1-218ENST00000472861 LMTK3Q96Q04 1460 aa15.5■□□□□ 0.07
SH3YL1-218ENST00000472861 SNAPC4Q5SXM2 1469 aa15.47■□□□□ 0.07
SH3YL1-218ENST00000472861 KIF13AQ9H1H9 1805 aa15.47■□□□□ 0.07
SH3YL1-218ENST00000472861 SOCS7O14512 581 aa15.46■□□□□ 0.07
SH3YL1-218ENST00000472861 TDRD9Q8NDG6 1382 aaKnown RBP15.46■□□□□ 0.07
SH3YL1-218ENST00000472861 HECW2Q9P2P5 1572 aa15.45■□□□□ 0.06
SH3YL1-218ENST00000472861 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
SH3YL1-218ENST00000472861 FAM69CQ0P6D2 419 aa15.42■□□□□ 0.06
SH3YL1-218ENST00000472861 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
SH3YL1-218ENST00000472861 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
SH3YL1-218ENST00000472861 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
SH3YL1-218ENST00000472861 SYNJ2O15056 1496 aa15.39■□□□□ 0.05
SH3YL1-218ENST00000472861 RAD54L2Q9Y4B4 1467 aa15.37■□□□□ 0.05
SH3YL1-218ENST00000472861 ABCC10Q5T3U5 1492 aa15.36■□□□□ 0.05
SH3YL1-218ENST00000472861 ILDR2Q71H61 639 aa15.36■□□□□ 0.05
SH3YL1-218ENST00000472861 KDM6BO15054 1643 aa15.35■□□□□ 0.05
SH3YL1-218ENST00000472861 ADGRL1O94910 1474 aa15.34■□□□□ 0.05
SH3YL1-218ENST00000472861 SOGA1O94964 1423 aa15.34■□□□□ 0.05
SH3YL1-218ENST00000472861 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
SH3YL1-218ENST00000472861 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
SH3YL1-218ENST00000472861 TOP2AP11388 1531 aaKnown RBP15.31■□□□□ 0.04
SH3YL1-218ENST00000472861 WDR97A6NE52 1622 aa15.29■□□□□ 0.04
SH3YL1-218ENST00000472861 CEP170Q5SW79 1584 aa15.22■□□□□ 0.03
SH3YL1-218ENST00000472861 DIP2BQ9P265 1576 aa15.22■□□□□ 0.03
SH3YL1-218ENST00000472861 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
SH3YL1-218ENST00000472861 MAPKBP1O60336 1514 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms