RNA–Protein interactions for RNA: ENST00000484633.5

PCBP4-212, Transcript of poly(rC) binding protein 4, humanhuman

TSL 5 BASIC

Gene PCBP4, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-212ENST00000484633 NISCHQ9Y2I1 1504 aa42.83■■■■■ 4.45
PCBP4-212ENST00000484633 CCDC180Q9P1Z9 1646 aa36.78■■■■□ 3.48
PCBP4-212ENST00000484633 ZCCHC6Q5VYS8 1495 aaKnown RBP36.23■■■■□ 3.39
PCBP4-212ENST00000484633 SHROOM4Q9ULL8 1493 aa35.9■■■■□ 3.34
PCBP4-212ENST00000484633 DCAF1Q9Y4B6 1507 aa35.31■■■■□ 3.24
PCBP4-212ENST00000484633 DCAF8L2P0C7V8 631 aa35.08■■■■□ 3.21
PCBP4-212ENST00000484633 SUPT5HO00267 1087 aaKnown RBP35.01■■■■□ 3.2
PCBP4-212ENST00000484633 MYO15BQ96JP2 1530 aa34.43■■■■□ 3.1
PCBP4-212ENST00000484633 ABCC9O60706 1549 aa34.17■■■■□ 3.06
PCBP4-212ENST00000484633 SCRIBQ14160 1630 aa34.15■■■■□ 3.06
PCBP4-212ENST00000484633 CHIC1Q5VXU3 224 aa34.05■■■■□ 3.04
PCBP4-212ENST00000484633 NACADO15069 1562 aa33.97■■■■□ 3.03
PCBP4-212ENST00000484633 RSF1Q96T23 1441 aaPredicted RBP33.68■■■□□ 2.98
PCBP4-212ENST00000484633 RB1CC1Q8TDY2 1594 aa33.45■■■□□ 2.94
PCBP4-212ENST00000484633 CECR2Q9BXF3 1484 aa33.29■■■□□ 2.92
PCBP4-212ENST00000484633 MROH2BQ7Z745 1585 aa33.21■■■□□ 2.91
PCBP4-212ENST00000484633 WIZO95785 1651 aa33.05■■■□□ 2.88
PCBP4-212ENST00000484633 UNC13AQ9UPW8 1703 aa33.01■■■□□ 2.88
PCBP4-212ENST00000484633 BAZ1AQ9NRL2 1556 aaPredicted RBP32.96■■■□□ 2.87
PCBP4-212ENST00000484633 LOC105371045A0A1W2PR82 267 aa32.87■■■□□ 2.85
PCBP4-212ENST00000484633 TRIM41Q8WV44 630 aa32.74■■■□□ 2.83
PCBP4-212ENST00000484633 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
PCBP4-212ENST00000484633 EIF4G1Q04637 1599 aaKnown RBP32.64■■■□□ 2.82
PCBP4-212ENST00000484633 TOP2AP11388 1531 aaKnown RBP32.62■■■□□ 2.81
PCBP4-212ENST00000484633 BICRAQ9NZM4 1560 aa32.54■■■□□ 2.8
PCBP4-212ENST00000484633 PCGF6Q9BYE7 350 aa32.53■■■□□ 2.8
PCBP4-212ENST00000484633 HRCP23327 699 aa32.45■■■□□ 2.79
PCBP4-212ENST00000484633 SMARCA2P51531 1590 aa32.4■■■□□ 2.78
PCBP4-212ENST00000484633 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
PCBP4-212ENST00000484633 FAM9AQ8IZU1 332 aaPredicted RBP32.31■■■□□ 2.76
PCBP4-212ENST00000484633 PABPN1Q86U42 306 aaKnown RBP eCLIP32.24■■■□□ 2.75
PCBP4-212ENST00000484633 PEG3Q9GZU2 1588 aa32.21■■■□□ 2.75
PCBP4-212ENST00000484633 TRIM26Q12899 539 aaPredicted RBP32.13■■■□□ 2.73
PCBP4-212ENST00000484633 ABCC8Q09428 1581 aa32.12■■■□□ 2.73
PCBP4-212ENST00000484633 EHMT2Q96KQ7 1210 aa31.91■■■□□ 2.7
PCBP4-212ENST00000484633 ATAD2BQ9ULI0 1458 aa31.88■■■□□ 2.69
PCBP4-212ENST00000484633 BAZ1BQ9UIG0 1483 aaKnown RBP31.77■■■□□ 2.68
PCBP4-212ENST00000484633 SOGA1O94964 1423 aa31.69■■■□□ 2.66
PCBP4-212ENST00000484633 EEA1Q15075 1411 aa31.68■■■□□ 2.66
PCBP4-212ENST00000484633 PPARGC1BQ86YN6 1023 aaKnown RBP31.66■■■□□ 2.66
PCBP4-212ENST00000484633 WRNQ14191 1432 aaPredicted RBP eCLIP31.64■■■□□ 2.66
PCBP4-212ENST00000484633 SYNJ1O43426 1573 aa31.58■■■□□ 2.65
PCBP4-212ENST00000484633 RUSC2Q8N2Y8 1516 aa31.55■■■□□ 2.64
PCBP4-212ENST00000484633 TNIKQ9UKE5 1360 aa31.47■■■□□ 2.63
PCBP4-212ENST00000484633 CEP162Q5TB80 1403 aa31.46■■■□□ 2.63
PCBP4-212ENST00000484633 CSRNP3Q8WYN3 585 aa31.46■■■□□ 2.63
PCBP4-212ENST00000484633 HMGXB3Q12766 1538 aa31.43■■■□□ 2.62
PCBP4-212ENST00000484633 GOLGA3Q08378 1498 aa31.39■■■□□ 2.62
PCBP4-212ENST00000484633 NCAPD3P42695 1498 aa31.35■■■□□ 2.61
PCBP4-212ENST00000484633 ZEB1P37275 1124 aaPredicted RBP31.33■■■□□ 2.61
PCBP4-212ENST00000484633 KIF21BO75037 1637 aa31.33■■■□□ 2.61
PCBP4-212ENST00000484633 TOP2BQ02880 1626 aa31.28■■■□□ 2.6
PCBP4-212ENST00000484633 CEP164Q9UPV0 1460 aa31.25■■■□□ 2.59
PCBP4-212ENST00000484633 BIVM-ERCC5R4GMW8 1640 aa31.24■■■□□ 2.59
PCBP4-212ENST00000484633 UBTFP17480 764 aaKnown RBP31.19■■■□□ 2.58
PCBP4-212ENST00000484633 CFTRP13569 1480 aa31.01■■■□□ 2.55
PCBP4-212ENST00000484633 RAPGEF2Q9Y4G8 1499 aa31■■■□□ 2.55
PCBP4-212ENST00000484633 PRDM2Q13029 1718 aa30.98■■■□□ 2.55
PCBP4-212ENST00000484633 CUX1P39880 1505 aa30.97■■■□□ 2.55
PCBP4-212ENST00000484633 CLIP1P30622 1438 aa30.93■■■□□ 2.54
PCBP4-212ENST00000484633 ERICH3Q5RHP9 1530 aa30.87■■■□□ 2.53
PCBP4-212ENST00000484633 TTBK1Q5TCY1 1321 aaPredicted RBP30.84■■■□□ 2.53
PCBP4-212ENST00000484633 VPS8Q8N3P4 1428 aa30.82■■■□□ 2.52
PCBP4-212ENST00000484633 PRXQ9BXM0 1461 aa30.82■■■□□ 2.52
PCBP4-212ENST00000484633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.79■■■□□ 2.52
PCBP4-212ENST00000484633 CCER1Q8TC90 406 aaPredicted RBP30.71■■■□□ 2.51
PCBP4-212ENST00000484633 CC2D2AQ9P2K1 1620 aa30.71■■■□□ 2.51
PCBP4-212ENST00000484633 KIF27Q86VH2 1401 aa30.7■■■□□ 2.51
PCBP4-212ENST00000484633 CADPSQ9ULU8 1353 aa30.65■■■□□ 2.5
PCBP4-212ENST00000484633 ARAP1Q96P48 1450 aa30.55■■■□□ 2.48
PCBP4-212ENST00000484633 RANGAP1P46060 587 aaPredicted RBP30.49■■■□□ 2.47
PCBP4-212ENST00000484633 APLP2Q06481 763 aa30.45■■■□□ 2.46
PCBP4-212ENST00000484633 FGD5Q6ZNL6 1462 aa30.45■■■□□ 2.46
PCBP4-212ENST00000484633 CUX2O14529 1486 aa30.44■■■□□ 2.46
PCBP4-212ENST00000484633 FANCD2Q9BXW9 1451 aa30.37■■■□□ 2.45
PCBP4-212ENST00000484633 IGF1RP08069 1367 aa30.34■■■□□ 2.45
PCBP4-212ENST00000484633 ARHGAP35Q9NRY4 1499 aa30.32■■■□□ 2.44
PCBP4-212ENST00000484633 DNMBPQ6XZF7 1577 aa30.29■■■□□ 2.44
PCBP4-212ENST00000484633 HNRNPUL2Q1KMD3 747 aaKnown RBP30.27■■■□□ 2.44
PCBP4-212ENST00000484633 CARMIL1Q5VZK9 1371 aa30.2■■■□□ 2.43
PCBP4-212ENST00000484633 NESP48681 1621 aa30.18■■■□□ 2.42
PCBP4-212ENST00000484633 TOPBP1Q92547 1522 aa30.17■■■□□ 2.42
PCBP4-212ENST00000484633 KANK4Q5T7N3 995 aaPredicted RBP30.14■■■□□ 2.42
PCBP4-212ENST00000484633 ABCA10Q8WWZ4 1543 aa30.14■■■□□ 2.41
PCBP4-212ENST00000484633 POLA1P09884 1462 aaPredicted RBP30.13■■■□□ 2.41
PCBP4-212ENST00000484633 LAMC3Q9Y6N6 1575 aa30.13■■■□□ 2.41
PCBP4-212ENST00000484633 RAD54L2Q9Y4B4 1467 aa30.09■■■□□ 2.41
PCBP4-212ENST00000484633 RRBP1Q9P2E9 1410 aaKnown RBP30.08■■■□□ 2.41
PCBP4-212ENST00000484633 WDR97A6NE52 1622 aa30.04■■■□□ 2.4
PCBP4-212ENST00000484633 CUL7Q14999 1698 aa30.03■■■□□ 2.4
PCBP4-212ENST00000484633 MAP3K1Q13233 1512 aa30.02■■■□□ 2.4
PCBP4-212ENST00000484633 TIAM1Q13009 1591 aa30.01■■■□□ 2.39
PCBP4-212ENST00000484633 URB2Q14146 1524 aaKnown RBP29.97■■■□□ 2.39
PCBP4-212ENST00000484633 DIEXFQ68CQ4 756 aaKnown RBP29.95■■■□□ 2.39
PCBP4-212ENST00000484633 CTTNBP2Q8WZ74 1663 aa29.93■■■□□ 2.38
PCBP4-212ENST00000484633 CFAP43Q8NDM7 1665 aa29.91■■■□□ 2.38
PCBP4-212ENST00000484633 CCNB3Q8WWL7 1395 aa29.89■■■□□ 2.37
PCBP4-212ENST00000484633 PCF11O94913 1555 aaKnown RBP29.88■■■□□ 2.37
PCBP4-212ENST00000484633 ZNF316A6NFI3 1004 aaPredicted RBP29.88■■■□□ 2.37
PCBP4-212ENST00000484633 FHAD1B1AJZ9 1412 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms