RNA–Protein interactions for RNA: ENST00000341852.10

TNIK-202, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-202ENST00000341852 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
TNIK-202ENST00000341852 DCAF8L2P0C7V8 631 aa25.33■■□□□ 1.65
TNIK-202ENST00000341852 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
TNIK-202ENST00000341852 CCDC180Q9P1Z9 1646 aa24.26■■□□□ 1.47
TNIK-202ENST00000341852 ABCC9O60706 1549 aa24.16■■□□□ 1.46
TNIK-202ENST00000341852 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
TNIK-202ENST00000341852 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
TNIK-202ENST00000341852 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
TNIK-202ENST00000341852 ZCCHC6Q5VYS8 1495 aaKnown RBP23.44■■□□□ 1.34
TNIK-202ENST00000341852 HRCP23327 699 aa23.38■■□□□ 1.33
TNIK-202ENST00000341852 PPARGC1BQ86YN6 1023 aaKnown RBP23.36■■□□□ 1.33
TNIK-202ENST00000341852 PELP1Q8IZL8 1130 aaKnown RBP23.11■■□□□ 1.29
TNIK-202ENST00000341852 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
TNIK-202ENST00000341852 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
TNIK-202ENST00000341852 NACADO15069 1562 aa23.07■■□□□ 1.28
TNIK-202ENST00000341852 FAM9AQ8IZU1 332 aaPredicted RBP23.01■■□□□ 1.27
TNIK-202ENST00000341852 DCAF1Q9Y4B6 1507 aa22.93■■□□□ 1.26
TNIK-202ENST00000341852 SCRIBQ14160 1630 aa22.91■■□□□ 1.26
TNIK-202ENST00000341852 TTBK1Q5TCY1 1321 aaPredicted RBP22.85■■□□□ 1.25
TNIK-202ENST00000341852 LOC105371045A0A1W2PR82 267 aa22.76■■□□□ 1.23
TNIK-202ENST00000341852 MYO15BQ96JP2 1530 aa22.7■■□□□ 1.22
TNIK-202ENST00000341852 ZEB1P37275 1124 aaPredicted RBP22.67■■□□□ 1.22
TNIK-202ENST00000341852 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
TNIK-202ENST00000341852 CENPBP07199 599 aaPredicted RBP22.63■■□□□ 1.21
TNIK-202ENST00000341852 TRIM26Q12899 539 aaPredicted RBP22.58■■□□□ 1.21
TNIK-202ENST00000341852 YTHDC1Q96MU7 727 aaKnown RBP22.58■■□□□ 1.21
TNIK-202ENST00000341852 CCER1Q8TC90 406 aaPredicted RBP22.58■■□□□ 1.21
TNIK-202ENST00000341852 MYT1Q01538 1121 aa22.36■■□□□ 1.17
TNIK-202ENST00000341852 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
TNIK-202ENST00000341852 GTF3C3Q9Y5Q9 886 aa22.13■■□□□ 1.13
TNIK-202ENST00000341852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.12■■□□□ 1.13
TNIK-202ENST00000341852 SCAF1Q9H7N4 1312 aaKnown RBP22.03■■□□□ 1.12
TNIK-202ENST00000341852 DIEXFQ68CQ4 756 aaKnown RBP21.99■■□□□ 1.11
TNIK-202ENST00000341852 RANGAP1P46060 587 aaPredicted RBP21.98■■□□□ 1.11
TNIK-202ENST00000341852 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
TNIK-202ENST00000341852 BAZ1AQ9NRL2 1556 aaPredicted RBP21.95■■□□□ 1.1
TNIK-202ENST00000341852 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
TNIK-202ENST00000341852 APLP2Q06481 763 aa21.91■■□□□ 1.1
TNIK-202ENST00000341852 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
TNIK-202ENST00000341852 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.08
TNIK-202ENST00000341852 NEUROD1Q13562 356 aa21.76■■□□□ 1.07
TNIK-202ENST00000341852 UBTFP17480 764 aaKnown RBP21.74■■□□□ 1.07
TNIK-202ENST00000341852 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
TNIK-202ENST00000341852 ERICH6Q7L0X2 663 aa21.72■■□□□ 1.07
TNIK-202ENST00000341852 BICRAQ9NZM4 1560 aa21.65■■□□□ 1.06
TNIK-202ENST00000341852 HNRNPUL2Q1KMD3 747 aaKnown RBP21.64■■□□□ 1.05
TNIK-202ENST00000341852 SMARCA2P51531 1590 aa21.64■■□□□ 1.05
TNIK-202ENST00000341852 SMARCA4P51532 1647 aa21.59■■□□□ 1.05
TNIK-202ENST00000341852 UNC13AQ9UPW8 1703 aa21.56■■□□□ 1.04
TNIK-202ENST00000341852 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.04
TNIK-202ENST00000341852 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.03
TNIK-202ENST00000341852 NEFLP07196 543 aa21.5■■□□□ 1.03
TNIK-202ENST00000341852 WIZO95785 1651 aa21.46■■□□□ 1.03
TNIK-202ENST00000341852 BCANQ96GW7 911 aa21.45■■□□□ 1.02
TNIK-202ENST00000341852 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
TNIK-202ENST00000341852 ZNF316A6NFI3 1004 aaPredicted RBP21.33■■□□□ 1.01
TNIK-202ENST00000341852 ITGAEP38570 1179 aa21.31■■□□□ 1
TNIK-202ENST00000341852 NCAPD3P42695 1498 aa21.3■■□□□ 1
TNIK-202ENST00000341852 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
TNIK-202ENST00000341852 CC2D2AQ9P2K1 1620 aa21.27■■□□□ 1
TNIK-202ENST00000341852 ERCC6Q03468 1493 aa21.18■□□□□ 0.98
TNIK-202ENST00000341852 ATP1B4Q9UN42 357 aaPredicted RBP21.18■□□□□ 0.98
TNIK-202ENST00000341852 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
TNIK-202ENST00000341852 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
TNIK-202ENST00000341852 PDS5BQ9NTI5 1447 aa21.09■□□□□ 0.97
TNIK-202ENST00000341852 MIER1Q8N108 512 aa21.09■□□□□ 0.97
TNIK-202ENST00000341852 HMGXB3Q12766 1538 aa21.08■□□□□ 0.96
TNIK-202ENST00000341852 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
TNIK-202ENST00000341852 FBLN2P98095 1184 aa21■□□□□ 0.95
TNIK-202ENST00000341852 CNGB1Q14028 1251 aaPredicted RBP20.99■□□□□ 0.95
TNIK-202ENST00000341852 CSRNP3Q8WYN3 585 aa20.95■□□□□ 0.94
TNIK-202ENST00000341852 PEG3Q9GZU2 1588 aa20.92■□□□□ 0.94
TNIK-202ENST00000341852 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
TNIK-202ENST00000341852 FKBP8Q14318 412 aa20.85■□□□□ 0.93
TNIK-202ENST00000341852 FANCD2Q9BXW9 1451 aa20.85■□□□□ 0.93
TNIK-202ENST00000341852 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
TNIK-202ENST00000341852 CFTRP13569 1480 aa20.77■□□□□ 0.91
TNIK-202ENST00000341852 NESP48681 1621 aa20.75■□□□□ 0.91
TNIK-202ENST00000341852 KIF27Q86VH2 1401 aa20.72■□□□□ 0.91
TNIK-202ENST00000341852 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
TNIK-202ENST00000341852 CHMP7Q8WUX9 453 aaPredicted RBP20.7■□□□□ 0.9
TNIK-202ENST00000341852 ANP32EQ9BTT0 268 aa20.69■□□□□ 0.9
TNIK-202ENST00000341852 EEA1Q15075 1411 aa20.68■□□□□ 0.9
TNIK-202ENST00000341852 SOGA1O94964 1423 aa20.67■□□□□ 0.9
TNIK-202ENST00000341852 CDK11AQ9UQ88 783 aaPredicted RBP20.66■□□□□ 0.9
TNIK-202ENST00000341852 RTL5Q5HYW3 569 aaPredicted RBP20.65■□□□□ 0.9
TNIK-202ENST00000341852 CUX2O14529 1486 aa20.64■□□□□ 0.9
TNIK-202ENST00000341852 BCL11AQ9H165 835 aa20.63■□□□□ 0.89
TNIK-202ENST00000341852 TRIM52Q96A61 297 aa20.62■□□□□ 0.89
TNIK-202ENST00000341852 LAMC3Q9Y6N6 1575 aa20.6■□□□□ 0.89
TNIK-202ENST00000341852 DDX10Q13206 875 aaKnown RBP20.58■□□□□ 0.89
TNIK-202ENST00000341852 ANP32CO43423 234 aa20.57■□□□□ 0.88
TNIK-202ENST00000341852 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
TNIK-202ENST00000341852 TDRD9Q8NDG6 1382 aaKnown RBP20.56■□□□□ 0.88
TNIK-202ENST00000341852 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
TNIK-202ENST00000341852 P3H3Q8IVL6 736 aa20.53■□□□□ 0.88
TNIK-202ENST00000341852 IRX6P78412 446 aaPredicted RBP20.52■□□□□ 0.88
TNIK-202ENST00000341852 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
TNIK-202ENST00000341852 HIRIP3Q9BW71 556 aaPredicted RBP20.49■□□□□ 0.87
TNIK-202ENST00000341852 FGD5Q6ZNL6 1462 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms