RNA–Protein interactions for RNA: ENST00000505587.5

CCNH-205, Transcript of cyclin H, humanhuman

TSL 2

Gene CCNH, Length 1,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-205ENST00000505587 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
CCNH-205ENST00000505587 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
CCNH-205ENST00000505587 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
CCNH-205ENST00000505587 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
CCNH-205ENST00000505587 FOXD1Q16676 465 aa17.71■□□□□ 0.43
CCNH-205ENST00000505587 MSH5O43196 834 aa16.7■□□□□ 0.26
CCNH-205ENST00000505587 PLPPR3Q6T4P5 718 aa16.7■□□□□ 0.26
CCNH-205ENST00000505587 POTEDQ86YR6 584 aa16.57■□□□□ 0.24
CCNH-205ENST00000505587 PIAS4Q8N2W9 510 aaPredicted RBP16.53■□□□□ 0.24
CCNH-205ENST00000505587 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
CCNH-205ENST00000505587 ADRA2BP18089 450 aa16.36■□□□□ 0.21
CCNH-205ENST00000505587 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
CCNH-205ENST00000505587 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
CCNH-205ENST00000505587 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
CCNH-205ENST00000505587 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
CCNH-205ENST00000505587 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
CCNH-205ENST00000505587 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
CCNH-205ENST00000505587 HOXD11P31277 338 aaPredicted RBP14.43□□□□□ -0.1
CCNH-205ENST00000505587 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
CCNH-205ENST00000505587 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
CCNH-205ENST00000505587 RNF39Q9H2S5 420 aa14.2□□□□□ -0.14
CCNH-205ENST00000505587 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
CCNH-205ENST00000505587 C1QBPQ07021 282 aaKnown RBP14.02□□□□□ -0.16
CCNH-205ENST00000505587 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
CCNH-205ENST00000505587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.24e-7■■■□□ 15.3
CCNH-205ENST00000505587 NPM3O75607 178 aaKnown RBP13.76□□□□□ -0.21
CCNH-205ENST00000505587 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
CCNH-205ENST00000505587 KCNA4P22459 653 aa13.33□□□□□ -0.28
CCNH-205ENST00000505587 CAPN15O75808 1086 aa13.3□□□□□ -0.28
CCNH-205ENST00000505587 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
CCNH-205ENST00000505587 DSG3P32926 999 aa13.24□□□□□ -0.29
CCNH-205ENST00000505587 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
CCNH-205ENST00000505587 APLP2Q06481 763 aa13.13□□□□□ -0.31
CCNH-205ENST00000505587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
CCNH-205ENST00000505587 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
CCNH-205ENST00000505587 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
CCNH-205ENST00000505587 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
CCNH-205ENST00000505587 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
CCNH-205ENST00000505587 POTEHQ6S545 545 aa12.95□□□□□ -0.34
CCNH-205ENST00000505587 ABCB7O75027 752 aa12.94□□□□□ -0.34
CCNH-205ENST00000505587 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
CCNH-205ENST00000505587 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
CCNH-205ENST00000505587 POLA2Q14181 598 aa12.64□□□□□ -0.39
CCNH-205ENST00000505587 SLC4A1APQ9BWU0 796 aaKnown RBP12.58□□□□□ -0.4
CCNH-205ENST00000505587 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
CCNH-205ENST00000505587 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
CCNH-205ENST00000505587 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
CCNH-205ENST00000505587 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
CCNH-205ENST00000505587 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
CCNH-205ENST00000505587 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
CCNH-205ENST00000505587 ZBTB22O15209 634 aa12.21□□□□□ -0.46
CCNH-205ENST00000505587 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.46
CCNH-205ENST00000505587 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
CCNH-205ENST00000505587 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
CCNH-205ENST00000505587 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
CCNH-205ENST00000505587 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
CCNH-205ENST00000505587 FBLN2P98095 1184 aa12.04□□□□□ -0.48
CCNH-205ENST00000505587 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCNH-205ENST00000505587 SPDYE2BA6NHP3 402 aa12□□□□□ -0.49
CCNH-205ENST00000505587 SPDYE6P0CI01 402 aa12□□□□□ -0.49
CCNH-205ENST00000505587 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
CCNH-205ENST00000505587 HAX1O00165 279 aa11.96□□□□□ -0.5
CCNH-205ENST00000505587 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
CCNH-205ENST00000505587 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
CCNH-205ENST00000505587 ZNF692Q9BU19 519 aaPredicted RBP11.83□□□□□ -0.52
CCNH-205ENST00000505587 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
CCNH-205ENST00000505587 SSUH2Q9Y2M2 353 aa11.79□□□□□ -0.52
CCNH-205ENST00000505587 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.53
CCNH-205ENST00000505587 EVX2Q03828 476 aa11.72□□□□□ -0.53
CCNH-205ENST00000505587 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCNH-205ENST00000505587 C19orf67A6NJJ6 358 aa11.62□□□□□ -0.55
CCNH-205ENST00000505587 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
CCNH-205ENST00000505587 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
CCNH-205ENST00000505587 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
CCNH-205ENST00000505587 GABBR2O75899 941 aa11.5□□□□□ -0.57
CCNH-205ENST00000505587 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
CCNH-205ENST00000505587 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
CCNH-205ENST00000505587 CLCN6P51797 869 aa11.35□□□□□ -0.59
CCNH-205ENST00000505587 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
CCNH-205ENST00000505587 LHX8Q68G74 356 aa11.32□□□□□ -0.6
CCNH-205ENST00000505587 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
CCNH-205ENST00000505587 SPDYE4A6NLX3 237 aa11.25□□□□□ -0.61
CCNH-205ENST00000505587 PLSCR2Q9NRY7 297 aa11.24□□□□□ -0.61
CCNH-205ENST00000505587 CREBZFQ9NS37 354 aa11.24□□□□□ -0.61
CCNH-205ENST00000505587 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
CCNH-205ENST00000505587 ZRANB1Q9UGI0 708 aa11.21□□□□□ -0.62
CCNH-205ENST00000505587 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
CCNH-205ENST00000505587 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
CCNH-205ENST00000505587 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
CCNH-205ENST00000505587 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCNH-205ENST00000505587 GALR2O43603 387 aaPredicted RBP11.05□□□□□ -0.64
CCNH-205ENST00000505587 MNX1P50219 401 aaPredicted RBP11□□□□□ -0.65
CCNH-205ENST00000505587 PHF12Q96QT6 1004 aa10.99□□□□□ -0.65
CCNH-205ENST00000505587 PROM2Q8N271 834 aa10.92□□□□□ -0.66
CCNH-205ENST00000505587 OTUD5Q96G74 571 aa10.86□□□□□ -0.67
CCNH-205ENST00000505587 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
CCNH-205ENST00000505587 TSPYL2Q9H2G4 693 aaPredicted RBP10.84□□□□□ -0.67
CCNH-205ENST00000505587 POTEB2H3BUK9 544 aa10.84□□□□□ -0.67
CCNH-205ENST00000505587 PLEKHG5O94827 1062 aa10.84□□□□□ -0.67
CCNH-205ENST00000505587 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms