RNA–Protein interactions for RNA: ENST00000483411.5

PCBP4-211, Transcript of poly(rC) binding protein 4, humanhuman

TSL 4

Gene PCBP4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-211ENST00000483411 NISCHQ9Y2I1 1504 aa33.12■■■□□ 2.89
PCBP4-211ENST00000483411 CCDC180Q9P1Z9 1646 aa29.17■■■□□ 2.26
PCBP4-211ENST00000483411 ABCC9O60706 1549 aa28.09■■■□□ 2.09
PCBP4-211ENST00000483411 ZCCHC6Q5VYS8 1495 aaKnown RBP27.67■■■□□ 2.02
PCBP4-211ENST00000483411 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
PCBP4-211ENST00000483411 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
PCBP4-211ENST00000483411 MYO15BQ96JP2 1530 aa27.41■■□□□ 1.98
PCBP4-211ENST00000483411 NACADO15069 1562 aa27.37■■□□□ 1.97
PCBP4-211ENST00000483411 RB1CC1Q8TDY2 1594 aa27.25■■□□□ 1.95
PCBP4-211ENST00000483411 SCRIBQ14160 1630 aa26.63■■□□□ 1.85
PCBP4-211ENST00000483411 UNC13AQ9UPW8 1703 aa26.53■■□□□ 1.84
PCBP4-211ENST00000483411 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
PCBP4-211ENST00000483411 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
PCBP4-211ENST00000483411 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
PCBP4-211ENST00000483411 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
PCBP4-211ENST00000483411 CECR2Q9BXF3 1484 aa25.72■■□□□ 1.71
PCBP4-211ENST00000483411 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
PCBP4-211ENST00000483411 BAZ1AQ9NRL2 1556 aaPredicted RBP25.62■■□□□ 1.69
PCBP4-211ENST00000483411 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
PCBP4-211ENST00000483411 MROH2BQ7Z745 1585 aa25.51■■□□□ 1.67
PCBP4-211ENST00000483411 RSF1Q96T23 1441 aaPredicted RBP25.44■■□□□ 1.66
PCBP4-211ENST00000483411 CC2D2AQ9P2K1 1620 aa25.43■■□□□ 1.66
PCBP4-211ENST00000483411 ATAD2BQ9ULI0 1458 aa25.34■■□□□ 1.65
PCBP4-211ENST00000483411 PEG3Q9GZU2 1588 aa25.34■■□□□ 1.65
PCBP4-211ENST00000483411 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
PCBP4-211ENST00000483411 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
PCBP4-211ENST00000483411 WIZO95785 1651 aa25.21■■□□□ 1.63
PCBP4-211ENST00000483411 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
PCBP4-211ENST00000483411 SUPT5HO00267 1087 aaKnown RBP25.13■■□□□ 1.61
PCBP4-211ENST00000483411 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
PCBP4-211ENST00000483411 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
PCBP4-211ENST00000483411 CCDC88BA6NC98 1476 aa24.75■■□□□ 1.55
PCBP4-211ENST00000483411 CADPSQ9ULU8 1353 aa24.57■■□□□ 1.52
PCBP4-211ENST00000483411 DNAJC5Q9H3Z4 198 aa24.57■■□□□ 1.52
PCBP4-211ENST00000483411 CFTRP13569 1480 aa24.51■■□□□ 1.51
PCBP4-211ENST00000483411 LAMC3Q9Y6N6 1575 aa24.49■■□□□ 1.51
PCBP4-211ENST00000483411 NESP48681 1621 aa24.45■■□□□ 1.5
PCBP4-211ENST00000483411 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
PCBP4-211ENST00000483411 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
PCBP4-211ENST00000483411 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
PCBP4-211ENST00000483411 ERCC6Q03468 1493 aa24.19■■□□□ 1.46
PCBP4-211ENST00000483411 CEP164Q9UPV0 1460 aa24.16■■□□□ 1.46
PCBP4-211ENST00000483411 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
PCBP4-211ENST00000483411 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
PCBP4-211ENST00000483411 ABCC8Q09428 1581 aa23.98■■□□□ 1.43
PCBP4-211ENST00000483411 URB2Q14146 1524 aaKnown RBP23.96■■□□□ 1.43
PCBP4-211ENST00000483411 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.43
PCBP4-211ENST00000483411 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
PCBP4-211ENST00000483411 WDR62O43379 1518 aa23.93■■□□□ 1.42
PCBP4-211ENST00000483411 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
PCBP4-211ENST00000483411 CUX1P39880 1505 aa23.9■■□□□ 1.42
PCBP4-211ENST00000483411 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
PCBP4-211ENST00000483411 CUX2O14529 1486 aa23.87■■□□□ 1.41
PCBP4-211ENST00000483411 TOP2BQ02880 1626 aa23.82■■□□□ 1.4
PCBP4-211ENST00000483411 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
PCBP4-211ENST00000483411 BIVM-ERCC5R4GMW8 1640 aa23.79■■□□□ 1.4
PCBP4-211ENST00000483411 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
PCBP4-211ENST00000483411 TRIM41Q8WV44 630 aa23.75■■□□□ 1.39
PCBP4-211ENST00000483411 POLA1P09884 1462 aaPredicted RBP23.74■■□□□ 1.39
PCBP4-211ENST00000483411 FGD5Q6ZNL6 1462 aa23.74■■□□□ 1.39
PCBP4-211ENST00000483411 SOGA1O94964 1423 aa23.68■■□□□ 1.38
PCBP4-211ENST00000483411 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
PCBP4-211ENST00000483411 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
PCBP4-211ENST00000483411 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
PCBP4-211ENST00000483411 ABCA10Q8WWZ4 1543 aa23.56■■□□□ 1.36
PCBP4-211ENST00000483411 ZNF608Q9ULD9 1512 aaPredicted RBP23.48■■□□□ 1.35
PCBP4-211ENST00000483411 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
PCBP4-211ENST00000483411 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
PCBP4-211ENST00000483411 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.34
PCBP4-211ENST00000483411 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
PCBP4-211ENST00000483411 GAPVD1Q14C86 1478 aa23.4■■□□□ 1.34
PCBP4-211ENST00000483411 ABCA5Q8WWZ7 1642 aa23.38■■□□□ 1.33
PCBP4-211ENST00000483411 EIF4G3O43432 1585 aaKnown RBP23.37■■□□□ 1.33
PCBP4-211ENST00000483411 GRIN2BQ13224 1484 aa23.34■■□□□ 1.33
PCBP4-211ENST00000483411 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.32
PCBP4-211ENST00000483411 EEA1Q15075 1411 aa23.32■■□□□ 1.32
PCBP4-211ENST00000483411 IGF1RP08069 1367 aa23.3■■□□□ 1.32
PCBP4-211ENST00000483411 ERICH3Q5RHP9 1530 aa23.28■■□□□ 1.32
PCBP4-211ENST00000483411 CSRNP3Q8WYN3 585 aa23.23■■□□□ 1.31
PCBP4-211ENST00000483411 MAGI1Q96QZ7 1491 aaPredicted RBP23.22■■□□□ 1.31
PCBP4-211ENST00000483411 PBRM1Q86U86 1689 aa23.22■■□□□ 1.31
PCBP4-211ENST00000483411 SNAPC4Q5SXM2 1469 aa23.2■■□□□ 1.3
PCBP4-211ENST00000483411 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
PCBP4-211ENST00000483411 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
PCBP4-211ENST00000483411 CARMIL1Q5VZK9 1371 aa23.15■■□□□ 1.3
PCBP4-211ENST00000483411 CUL7Q14999 1698 aa23.13■■□□□ 1.29
PCBP4-211ENST00000483411 SYNJ2O15056 1496 aa23.12■■□□□ 1.29
PCBP4-211ENST00000483411 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
PCBP4-211ENST00000483411 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
PCBP4-211ENST00000483411 CHMP7Q8WUX9 453 aaPredicted RBP23.1■■□□□ 1.29
PCBP4-211ENST00000483411 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
PCBP4-211ENST00000483411 FBLN2P98095 1184 aa23.05■■□□□ 1.28
PCBP4-211ENST00000483411 GRIN2AQ12879 1464 aa23.02■■□□□ 1.28
PCBP4-211ENST00000483411 KIF21BO75037 1637 aa22.97■■□□□ 1.27
PCBP4-211ENST00000483411 OSCARQ8IYS5 282 aa22.94■■□□□ 1.26
PCBP4-211ENST00000483411 CHD1O14646 1710 aa22.94■■□□□ 1.26
PCBP4-211ENST00000483411 NUP160Q12769 1436 aa22.91■■□□□ 1.26
PCBP4-211ENST00000483411 GOLGA3Q08378 1498 aa22.91■■□□□ 1.26
PCBP4-211ENST00000483411 CEP170Q5SW79 1584 aa22.85■■□□□ 1.25
PCBP4-211ENST00000483411 KIAA0586Q9BVV6 1533 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms