RNA–Protein interactions for RNA: ENST00000355852.6

PCBP4-202, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-202ENST00000355852 NISCHQ9Y2I1 1504 aa37.49■■■■□ 3.59
PCBP4-202ENST00000355852 CCDC180Q9P1Z9 1646 aa32.93■■■□□ 2.86
PCBP4-202ENST00000355852 ABCC9O60706 1549 aa31.53■■■□□ 2.64
PCBP4-202ENST00000355852 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
PCBP4-202ENST00000355852 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.58
PCBP4-202ENST00000355852 DCAF1Q9Y4B6 1507 aa30.97■■■□□ 2.55
PCBP4-202ENST00000355852 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
PCBP4-202ENST00000355852 NACADO15069 1562 aa30.75■■■□□ 2.51
PCBP4-202ENST00000355852 RB1CC1Q8TDY2 1594 aa30.61■■■□□ 2.49
PCBP4-202ENST00000355852 SHROOM4Q9ULL8 1493 aa30.34■■■□□ 2.45
PCBP4-202ENST00000355852 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
PCBP4-202ENST00000355852 UNC13AQ9UPW8 1703 aa30.01■■■□□ 2.39
PCBP4-202ENST00000355852 BICRAQ9NZM4 1560 aa29.66■■■□□ 2.34
PCBP4-202ENST00000355852 PABPN1Q86U42 306 aaKnown RBP eCLIP29.61■■■□□ 2.33
PCBP4-202ENST00000355852 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
PCBP4-202ENST00000355852 BAZ1AQ9NRL2 1556 aaPredicted RBP29.01■■■□□ 2.23
PCBP4-202ENST00000355852 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
PCBP4-202ENST00000355852 SUPT5HO00267 1087 aaKnown RBP28.95■■■□□ 2.23
PCBP4-202ENST00000355852 SMARCA4P51532 1647 aa28.94■■■□□ 2.22
PCBP4-202ENST00000355852 RSF1Q96T23 1441 aaPredicted RBP28.9■■■□□ 2.22
PCBP4-202ENST00000355852 EIF4G1Q04637 1599 aaKnown RBP28.83■■■□□ 2.21
PCBP4-202ENST00000355852 WIZO95785 1651 aa28.73■■■□□ 2.19
PCBP4-202ENST00000355852 PEG3Q9GZU2 1588 aa28.57■■■□□ 2.16
PCBP4-202ENST00000355852 ATAD2BQ9ULI0 1458 aa28.54■■■□□ 2.16
PCBP4-202ENST00000355852 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
PCBP4-202ENST00000355852 CC2D2AQ9P2K1 1620 aa28.52■■■□□ 2.16
PCBP4-202ENST00000355852 TOP2AP11388 1531 aaKnown RBP28.4■■■□□ 2.14
PCBP4-202ENST00000355852 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.14
PCBP4-202ENST00000355852 NCAPD3P42695 1498 aa28.34■■■□□ 2.13
PCBP4-202ENST00000355852 HMGXB3Q12766 1538 aa28.32■■■□□ 2.12
PCBP4-202ENST00000355852 DNAJC5BQ9UF47 199 aa28.12■■■□□ 2.09
PCBP4-202ENST00000355852 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
PCBP4-202ENST00000355852 CFTRP13569 1480 aa27.62■■■□□ 2.01
PCBP4-202ENST00000355852 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
PCBP4-202ENST00000355852 NESP48681 1621 aa27.53■■■□□ 2
PCBP4-202ENST00000355852 PRDM2Q13029 1718 aa27.53■■■□□ 2
PCBP4-202ENST00000355852 LAMC3Q9Y6N6 1575 aa27.5■■□□□ 1.99
PCBP4-202ENST00000355852 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
PCBP4-202ENST00000355852 ABCC8Q09428 1581 aa27.4■■□□□ 1.98
PCBP4-202ENST00000355852 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
PCBP4-202ENST00000355852 PDS5BQ9NTI5 1447 aa27.29■■□□□ 1.96
PCBP4-202ENST00000355852 WRNQ14191 1432 aaPredicted RBP eCLIP27.25■■□□□ 1.95
PCBP4-202ENST00000355852 KIF21AQ7Z4S6 1674 aa27.24■■□□□ 1.95
PCBP4-202ENST00000355852 TRIM41Q8WV44 630 aa27.24■■□□□ 1.95
PCBP4-202ENST00000355852 CEP164Q9UPV0 1460 aa27.22■■□□□ 1.95
PCBP4-202ENST00000355852 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
PCBP4-202ENST00000355852 CUX1P39880 1505 aa27.12■■□□□ 1.93
PCBP4-202ENST00000355852 ERCC6Q03468 1493 aa27.1■■□□□ 1.93
PCBP4-202ENST00000355852 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
PCBP4-202ENST00000355852 BIVM-ERCC5R4GMW8 1640 aa27.07■■□□□ 1.92
PCBP4-202ENST00000355852 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.92
PCBP4-202ENST00000355852 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
PCBP4-202ENST00000355852 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
PCBP4-202ENST00000355852 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
PCBP4-202ENST00000355852 HRCP23327 699 aa26.95■■□□□ 1.91
PCBP4-202ENST00000355852 FGD5Q6ZNL6 1462 aa26.89■■□□□ 1.9
PCBP4-202ENST00000355852 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.89
PCBP4-202ENST00000355852 WDR62O43379 1518 aa26.85■■□□□ 1.89
PCBP4-202ENST00000355852 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
PCBP4-202ENST00000355852 SOGA1O94964 1423 aa26.76■■□□□ 1.87
PCBP4-202ENST00000355852 FAM9AQ8IZU1 332 aaPredicted RBP26.75■■□□□ 1.87
PCBP4-202ENST00000355852 RAD54L2Q9Y4B4 1467 aa26.72■■□□□ 1.87
PCBP4-202ENST00000355852 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
PCBP4-202ENST00000355852 CUX2O14529 1486 aa26.64■■□□□ 1.86
PCBP4-202ENST00000355852 ABCA10Q8WWZ4 1543 aa26.63■■□□□ 1.85
PCBP4-202ENST00000355852 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
PCBP4-202ENST00000355852 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
PCBP4-202ENST00000355852 EEA1Q15075 1411 aa26.61■■□□□ 1.85
PCBP4-202ENST00000355852 KIF27Q86VH2 1401 aa26.6■■□□□ 1.85
PCBP4-202ENST00000355852 IFT140Q96RY7 1462 aa26.56■■□□□ 1.84
PCBP4-202ENST00000355852 TDRD9Q8NDG6 1382 aaKnown RBP26.5■■□□□ 1.83
PCBP4-202ENST00000355852 CSRNP3Q8WYN3 585 aa26.48■■□□□ 1.83
PCBP4-202ENST00000355852 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
PCBP4-202ENST00000355852 ZNF608Q9ULD9 1512 aaPredicted RBP26.45■■□□□ 1.82
PCBP4-202ENST00000355852 GAPVD1Q14C86 1478 aa26.43■■□□□ 1.82
PCBP4-202ENST00000355852 EHMT2Q96KQ7 1210 aa26.43■■□□□ 1.82
PCBP4-202ENST00000355852 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.821e-8■■■□□ 18.9
PCBP4-202ENST00000355852 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
PCBP4-202ENST00000355852 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
PCBP4-202ENST00000355852 IGF1RP08069 1367 aa26.36■■□□□ 1.81
PCBP4-202ENST00000355852 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
PCBP4-202ENST00000355852 KIF21BO75037 1637 aa26.32■■□□□ 1.8
PCBP4-202ENST00000355852 ERICH3Q5RHP9 1530 aa26.32■■□□□ 1.8
PCBP4-202ENST00000355852 GRIN2BQ13224 1484 aa26.28■■□□□ 1.8
PCBP4-202ENST00000355852 PRXQ9BXM0 1461 aa26.28■■□□□ 1.8
PCBP4-202ENST00000355852 CUL7Q14999 1698 aa26.27■■□□□ 1.8
PCBP4-202ENST00000355852 GOLGA3Q08378 1498 aa26.25■■□□□ 1.79
PCBP4-202ENST00000355852 RAPGEF2Q9Y4G8 1499 aa26.24■■□□□ 1.79
PCBP4-202ENST00000355852 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
PCBP4-202ENST00000355852 PCGF6Q9BYE7 350 aa26.24■■□□□ 1.79
PCBP4-202ENST00000355852 SNAPC4Q5SXM2 1469 aa26.18■■□□□ 1.78
PCBP4-202ENST00000355852 ADAMTS12P58397 1594 aa26.17■■□□□ 1.78
PCBP4-202ENST00000355852 UBTFP17480 764 aaKnown RBP26.16■■□□□ 1.78
PCBP4-202ENST00000355852 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
PCBP4-202ENST00000355852 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
PCBP4-202ENST00000355852 TNIKQ9UKE5 1360 aa26.04■■□□□ 1.76
PCBP4-202ENST00000355852 SYNJ2O15056 1496 aa26.01■■□□□ 1.75
PCBP4-202ENST00000355852 FBLN2P98095 1184 aa25.99■■□□□ 1.75
PCBP4-202ENST00000355852 PELP1Q8IZL8 1130 aaKnown RBP25.97■■□□□ 1.75
PCBP4-202ENST00000355852 CHMP7Q8WUX9 453 aaPredicted RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms