RNA–Protein interactions for RNA: ENST00000535650.7

ITCH-207, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene ITCH, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-207ENST00000535650 NISCHQ9Y2I1 1504 aa11.23□□□□□ -0.61
ITCH-207ENST00000535650 ABCC9O60706 1549 aa10.31□□□□□ -0.76
ITCH-207ENST00000535650 CCDC180Q9P1Z9 1646 aa9.97□□□□□ -0.81
ITCH-207ENST00000535650 DCAF8L2P0C7V8 631 aa9.96□□□□□ -0.82
ITCH-207ENST00000535650 CHIC1Q5VXU3 224 aa9.72□□□□□ -0.85
ITCH-207ENST00000535650 DNAJC5BQ9UF47 199 aa9.71□□□□□ -0.86
ITCH-207ENST00000535650 PABPN1Q86U42 306 aaKnown RBP eCLIP9.7□□□□□ -0.86
ITCH-207ENST00000535650 RB1CC1Q8TDY2 1594 aa9.64□□□□□ -0.87
ITCH-207ENST00000535650 AEBP2Q6ZN18 517 aaPredicted RBP9.61□□□□□ -0.87
ITCH-207ENST00000535650 NACADO15069 1562 aa9.52□□□□□ -0.89
ITCH-207ENST00000535650 UNC13AQ9UPW8 1703 aa9.31□□□□□ -0.92
ITCH-207ENST00000535650 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
ITCH-207ENST00000535650 BICRAQ9NZM4 1560 aa9.29□□□□□ -0.92
ITCH-207ENST00000535650 MYO15BQ96JP2 1530 aa9.26□□□□□ -0.93
ITCH-207ENST00000535650 ZCCHC6Q5VYS8 1495 aaKnown RBP9.26□□□□□ -0.93
ITCH-207ENST00000535650 CECR2Q9BXF3 1484 aa9.24□□□□□ -0.93
ITCH-207ENST00000535650 CC2D2AQ9P2K1 1620 aa9.18□□□□□ -0.94
ITCH-207ENST00000535650 DCAF1Q9Y4B6 1507 aa9.15□□□□□ -0.95
ITCH-207ENST00000535650 EIF4G1Q04637 1599 aaKnown RBP9.14□□□□□ -0.95
ITCH-207ENST00000535650 SHROOM4Q9ULL8 1493 aa9.08□□□□□ -0.96
ITCH-207ENST00000535650 ERCC6Q03468 1493 aa8.94□□□□□ -0.98
ITCH-207ENST00000535650 DNAJC5Q9H3Z4 198 aa8.94□□□□□ -0.98
ITCH-207ENST00000535650 SLC24A1O60721 1099 aa8.91□□□□□ -0.98
ITCH-207ENST00000535650 ATAD2BQ9ULI0 1458 aa8.82□□□□□ -1
ITCH-207ENST00000535650 NCAPD3P42695 1498 aa8.81□□□□□ -1
ITCH-207ENST00000535650 NESP48681 1621 aa8.8□□□□□ -1
ITCH-207ENST00000535650 BAZ1BQ9UIG0 1483 aaKnown RBP8.79□□□□□ -1
ITCH-207ENST00000535650 SMARCA2P51531 1590 aa8.77□□□□□ -1.01
ITCH-207ENST00000535650 CUX2O14529 1486 aa8.76□□□□□ -1.01
ITCH-207ENST00000535650 SMARCA4P51532 1647 aa8.75□□□□□ -1.01
ITCH-207ENST00000535650 TRIM41Q8WV44 630 aa8.75□□□□□ -1.01
ITCH-207ENST00000535650 EHMT2Q96KQ7 1210 aa8.74□□□□□ -1.01
ITCH-207ENST00000535650 PHF23Q9BUL5 403 aaPredicted RBP8.73□□□□□ -1.01
ITCH-207ENST00000535650 BAZ1AQ9NRL2 1556 aaPredicted RBP8.73□□□□□ -1.01
ITCH-207ENST00000535650 HMGXB3Q12766 1538 aa8.69□□□□□ -1.02
ITCH-207ENST00000535650 MROH2BQ7Z745 1585 aa8.69□□□□□ -1.02
ITCH-207ENST00000535650 PDS5BQ9NTI5 1447 aa8.68□□□□□ -1.02
ITCH-207ENST00000535650 CADPSQ9ULU8 1353 aa8.63□□□□□ -1.03
ITCH-207ENST00000535650 LAMC3Q9Y6N6 1575 aa8.61□□□□□ -1.03
ITCH-207ENST00000535650 WIZO95785 1651 aa8.58□□□□□ -1.04
ITCH-207ENST00000535650 KIF21AQ7Z4S6 1674 aa8.57□□□□□ -1.04
ITCH-207ENST00000535650 THOC2Q8NI27 1593 aaKnown RBP8.56□□□□□ -1.04
ITCH-207ENST00000535650 PEG3Q9GZU2 1588 aa8.56□□□□□ -1.04
ITCH-207ENST00000535650 MRC2Q9UBG0 1479 aa8.56□□□□□ -1.04
ITCH-207ENST00000535650 CEP164Q9UPV0 1460 aa8.55□□□□□ -1.04
ITCH-207ENST00000535650 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
ITCH-207ENST00000535650 FANCD2Q9BXW9 1451 aa8.53□□□□□ -1.04
ITCH-207ENST00000535650 FBLN2P98095 1184 aa8.51□□□□□ -1.05
ITCH-207ENST00000535650 RSF1Q96T23 1441 aaPredicted RBP8.51□□□□□ -1.05
ITCH-207ENST00000535650 WDR62O43379 1518 aa8.45□□□□□ -1.06
ITCH-207ENST00000535650 CFTRP13569 1480 aa8.45□□□□□ -1.06
ITCH-207ENST00000535650 TRHP20396 242 aaPredicted RBP8.44□□□□□ -1.06
ITCH-207ENST00000535650 CYB5RLQ6IPT4 315 aa8.43□□□□□ -1.06
ITCH-207ENST00000535650 TOP2AP11388 1531 aaKnown RBP8.43□□□□□ -1.06
ITCH-207ENST00000535650 URB2Q14146 1524 aaKnown RBP8.42□□□□□ -1.06
ITCH-207ENST00000535650 SUPT5HO00267 1087 aaKnown RBP8.41□□□□□ -1.06
ITCH-207ENST00000535650 CCDC88BA6NC98 1476 aa8.41□□□□□ -1.06
ITCH-207ENST00000535650 ZNF608Q9ULD9 1512 aaPredicted RBP8.38□□□□□ -1.07
ITCH-207ENST00000535650 PLPPR3Q6T4P5 718 aa8.35□□□□□ -1.07
ITCH-207ENST00000535650 CHMP7Q8WUX9 453 aaPredicted RBP8.35□□□□□ -1.07
ITCH-207ENST00000535650 AQRO60306 1485 aaKnown RBP eCLIP8.35□□□□□ -1.071e-6■■■□□ 17.3
ITCH-207ENST00000535650 IFT140Q96RY7 1462 aa8.35□□□□□ -1.07
ITCH-207ENST00000535650 TDRD9Q8NDG6 1382 aaKnown RBP8.33□□□□□ -1.08
ITCH-207ENST00000535650 TOPBP1Q92547 1522 aa8.33□□□□□ -1.08
ITCH-207ENST00000535650 SOGA1O94964 1423 aa8.3□□□□□ -1.08
ITCH-207ENST00000535650 RAD54L2Q9Y4B4 1467 aa8.29□□□□□ -1.08
ITCH-207ENST00000535650 ABCC8Q09428 1581 aa8.29□□□□□ -1.08
ITCH-207ENST00000535650 SENP3Q9H4L4 574 aaPredicted RBP8.28□□□□□ -1.08
ITCH-207ENST00000535650 ARHGEF11O15085 1522 aa8.27□□□□□ -1.09
ITCH-207ENST00000535650 RIMBP3CA6NJZ7 1639 aa8.27□□□□□ -1.09
ITCH-207ENST00000535650 RIMBP3BA6NNM3 1639 aa8.27□□□□□ -1.09
ITCH-207ENST00000535650 RIMBP3Q9UFD9 1639 aa8.27□□□□□ -1.09
ITCH-207ENST00000535650 RTN4Q9NQC3 1192 aaKnown RBP8.26□□□□□ -1.09
ITCH-207ENST00000535650 DNMBPQ6XZF7 1577 aa8.26□□□□□ -1.09
ITCH-207ENST00000535650 EIF4G3O43432 1585 aaKnown RBP8.25□□□□□ -1.09
ITCH-207ENST00000535650 POLA1P09884 1462 aaPredicted RBP8.25□□□□□ -1.09
ITCH-207ENST00000535650 CSRNP3Q8WYN3 585 aa8.24□□□□□ -1.09
ITCH-207ENST00000535650 KCNA4P22459 653 aa8.24□□□□□ -1.09
ITCH-207ENST00000535650 PRDM2Q13029 1718 aa8.22□□□□□ -1.09
ITCH-207ENST00000535650 FGD5Q6ZNL6 1462 aa8.22□□□□□ -1.09
ITCH-207ENST00000535650 SNAPC4Q5SXM2 1469 aa8.21□□□□□ -1.09
ITCH-207ENST00000535650 CHD1O14646 1710 aa8.19□□□□□ -1.1
ITCH-207ENST00000535650 TTBK1Q5TCY1 1321 aaPredicted RBP8.19□□□□□ -1.1
ITCH-207ENST00000535650 ARAP1Q96P48 1450 aa8.18□□□□□ -1.1
ITCH-207ENST00000535650 TARBP1Q13395 1621 aaKnown RBP8.17□□□□□ -1.1
ITCH-207ENST00000535650 GRIN2BQ13224 1484 aa8.17□□□□□ -1.1
ITCH-207ENST00000535650 CUX1P39880 1505 aa8.16□□□□□ -1.1
ITCH-207ENST00000535650 GAPVD1Q14C86 1478 aa8.15□□□□□ -1.1
ITCH-207ENST00000535650 AMER1Q5JTC6 1135 aaPredicted RBP8.14□□□□□ -1.11
ITCH-207ENST00000535650 SYNJ1O43426 1573 aa8.13□□□□□ -1.11
ITCH-207ENST00000535650 SYNJ2O15056 1496 aa8.13□□□□□ -1.11
ITCH-207ENST00000535650 MAGI1Q96QZ7 1491 aaPredicted RBP8.12□□□□□ -1.11
ITCH-207ENST00000535650 NPM1P06748 294 aaKnown RBP eCLIP8.12□□□□□ -1.11
ITCH-207ENST00000535650 WRNQ14191 1432 aaPredicted RBP eCLIP8.11□□□□□ -1.11
ITCH-207ENST00000535650 JPH4Q96JJ6 628 aa8.07□□□□□ -1.12
ITCH-207ENST00000535650 ABCA10Q8WWZ4 1543 aa8.05□□□□□ -1.12
ITCH-207ENST00000535650 FAM69CQ0P6D2 419 aa8.05□□□□□ -1.12
ITCH-207ENST00000535650 CLASP1Q7Z460 1538 aa8.05□□□□□ -1.12
ITCH-207ENST00000535650 GRIN2AQ12879 1464 aa8.04□□□□□ -1.12
ITCH-207ENST00000535650 PBRM1Q86U86 1689 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms