RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
MCF2L-206ENST00000397021 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
MCF2L-206ENST00000397021 ABCC9O60706 1549 aa20.61■□□□□ 0.89
MCF2L-206ENST00000397021 DCAF8L2P0C7V8 631 aa19.84■□□□□ 0.77
MCF2L-206ENST00000397021 RB1CC1Q8TDY2 1594 aa19.67■□□□□ 0.74
MCF2L-206ENST00000397021 NACADO15069 1562 aa19.62■□□□□ 0.73
MCF2L-206ENST00000397021 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
MCF2L-206ENST00000397021 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
MCF2L-206ENST00000397021 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
MCF2L-206ENST00000397021 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
MCF2L-206ENST00000397021 UNC13AQ9UPW8 1703 aa19.14■□□□□ 0.66
MCF2L-206ENST00000397021 SCRIBQ14160 1630 aa19.11■□□□□ 0.65
MCF2L-206ENST00000397021 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
MCF2L-206ENST00000397021 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
MCF2L-206ENST00000397021 SHROOM4Q9ULL8 1493 aa18.79■□□□□ 0.6
MCF2L-206ENST00000397021 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
MCF2L-206ENST00000397021 CC2D2AQ9P2K1 1620 aa18.55■□□□□ 0.56
MCF2L-206ENST00000397021 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
MCF2L-206ENST00000397021 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
MCF2L-206ENST00000397021 BAZ1AQ9NRL2 1556 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-206ENST00000397021 ATAD2BQ9ULI0 1458 aa18.18■□□□□ 0.5
MCF2L-206ENST00000397021 NCAPD3P42695 1498 aa18.15■□□□□ 0.5
MCF2L-206ENST00000397021 MROH2BQ7Z745 1585 aa18.15■□□□□ 0.5
MCF2L-206ENST00000397021 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
MCF2L-206ENST00000397021 BAZ1BQ9UIG0 1483 aaKnown RBP18.02■□□□□ 0.48
MCF2L-206ENST00000397021 HMGXB3Q12766 1538 aa18.01■□□□□ 0.47
MCF2L-206ENST00000397021 PEG3Q9GZU2 1588 aa17.99■□□□□ 0.47
MCF2L-206ENST00000397021 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
MCF2L-206ENST00000397021 WIZO95785 1651 aa17.92■□□□□ 0.46
MCF2L-206ENST00000397021 NESP48681 1621 aa17.81■□□□□ 0.44
MCF2L-206ENST00000397021 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
MCF2L-206ENST00000397021 TOP2AP11388 1531 aaKnown RBP17.7■□□□□ 0.42
MCF2L-206ENST00000397021 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
MCF2L-206ENST00000397021 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
MCF2L-206ENST00000397021 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.41
MCF2L-206ENST00000397021 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
MCF2L-206ENST00000397021 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
MCF2L-206ENST00000397021 CFTRP13569 1480 aa17.51■□□□□ 0.39
MCF2L-206ENST00000397021 CUX2O14529 1486 aa17.5■□□□□ 0.39
MCF2L-206ENST00000397021 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
MCF2L-206ENST00000397021 THOC2Q8NI27 1593 aaKnown RBP17.45■□□□□ 0.38
MCF2L-206ENST00000397021 FANCD2Q9BXW9 1451 aa17.45■□□□□ 0.38
MCF2L-206ENST00000397021 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
MCF2L-206ENST00000397021 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
MCF2L-206ENST00000397021 WDR62O43379 1518 aa17.31■□□□□ 0.36
MCF2L-206ENST00000397021 URB2Q14146 1524 aaKnown RBP17.28■□□□□ 0.36
MCF2L-206ENST00000397021 PRDM2Q13029 1718 aa17.2■□□□□ 0.34
MCF2L-206ENST00000397021 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
MCF2L-206ENST00000397021 DNAJC5Q9H3Z4 198 aa17.11■□□□□ 0.33
MCF2L-206ENST00000397021 ABCC8Q09428 1581 aa17.09■□□□□ 0.33
MCF2L-206ENST00000397021 DNMBPQ6XZF7 1577 aa17.09■□□□□ 0.33
MCF2L-206ENST00000397021 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
MCF2L-206ENST00000397021 ZNF608Q9ULD9 1512 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-206ENST00000397021 CUX1P39880 1505 aa17.02■□□□□ 0.32
MCF2L-206ENST00000397021 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-206ENST00000397021 RAD54L2Q9Y4B4 1467 aa16.99■□□□□ 0.31
MCF2L-206ENST00000397021 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
MCF2L-206ENST00000397021 SOGA1O94964 1423 aa16.97■□□□□ 0.31
MCF2L-206ENST00000397021 AQRO60306 1485 aaKnown RBP eCLIP16.95■□□□□ 0.3
MCF2L-206ENST00000397021 TARBP1Q13395 1621 aaKnown RBP16.93■□□□□ 0.3
MCF2L-206ENST00000397021 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
MCF2L-206ENST00000397021 WRNQ14191 1432 aaPredicted RBP eCLIP16.9■□□□□ 0.3
MCF2L-206ENST00000397021 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.29
MCF2L-206ENST00000397021 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
MCF2L-206ENST00000397021 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
MCF2L-206ENST00000397021 FBLN2P98095 1184 aa16.81■□□□□ 0.28
MCF2L-206ENST00000397021 TOP2BQ02880 1626 aa16.8■□□□□ 0.28
MCF2L-206ENST00000397021 BIVM-ERCC5R4GMW8 1640 aa16.77■□□□□ 0.27
MCF2L-206ENST00000397021 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
MCF2L-206ENST00000397021 GAPVD1Q14C86 1478 aa16.75■□□□□ 0.27
MCF2L-206ENST00000397021 SNAPC4Q5SXM2 1469 aa16.75■□□□□ 0.27
MCF2L-206ENST00000397021 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
MCF2L-206ENST00000397021 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
MCF2L-206ENST00000397021 CHMP7Q8WUX9 453 aaPredicted RBP16.7■□□□□ 0.26
MCF2L-206ENST00000397021 ABCA5Q8WWZ7 1642 aa16.67■□□□□ 0.26
MCF2L-206ENST00000397021 MAGI1Q96QZ7 1491 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-206ENST00000397021 CHD1O14646 1710 aa16.65■□□□□ 0.26
MCF2L-206ENST00000397021 SYNJ2O15056 1496 aa16.63■□□□□ 0.25
MCF2L-206ENST00000397021 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
MCF2L-206ENST00000397021 TRIM41Q8WV44 630 aa16.62■□□□□ 0.25
MCF2L-206ENST00000397021 FHAD1B1AJZ9 1412 aa16.54■□□□□ 0.24
MCF2L-206ENST00000397021 ADAMTS12P58397 1594 aa16.54■□□□□ 0.24
MCF2L-206ENST00000397021 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
MCF2L-206ENST00000397021 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
MCF2L-206ENST00000397021 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
MCF2L-206ENST00000397021 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
MCF2L-206ENST00000397021 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.23
MCF2L-206ENST00000397021 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.23
MCF2L-206ENST00000397021 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.23
MCF2L-206ENST00000397021 IGF1RP08069 1367 aa16.51■□□□□ 0.23
MCF2L-206ENST00000397021 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
MCF2L-206ENST00000397021 CYB5RLQ6IPT4 315 aa16.48■□□□□ 0.23
MCF2L-206ENST00000397021 NUP160Q12769 1436 aa16.45■□□□□ 0.22
MCF2L-206ENST00000397021 RUSC2Q8N2Y8 1516 aa16.45■□□□□ 0.22
MCF2L-206ENST00000397021 CEP170Q5SW79 1584 aa16.44■□□□□ 0.22
MCF2L-206ENST00000397021 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
MCF2L-206ENST00000397021 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
MCF2L-206ENST00000397021 ERCC6L2Q5T890 1561 aa16.34■□□□□ 0.21
MCF2L-206ENST00000397021 CUL7Q14999 1698 aa16.34■□□□□ 0.21
MCF2L-206ENST00000397021 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms