RNA–Protein interactions for RNA: ENST00000468324.5

PCBP4-207, Transcript of poly(rC) binding protein 4, humanhuman

TSL 3

Gene PCBP4, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-207ENST00000468324 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
PCBP4-207ENST00000468324 CCDC180Q9P1Z9 1646 aa29.53■■■□□ 2.32
PCBP4-207ENST00000468324 ABCC9O60706 1549 aa28.78■■■□□ 2.2
PCBP4-207ENST00000468324 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
PCBP4-207ENST00000468324 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
PCBP4-207ENST00000468324 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
PCBP4-207ENST00000468324 NACADO15069 1562 aa27.68■■■□□ 2.02
PCBP4-207ENST00000468324 MYO15BQ96JP2 1530 aa27.5■■□□□ 1.99
PCBP4-207ENST00000468324 DCAF1Q9Y4B6 1507 aa27.48■■□□□ 1.99
PCBP4-207ENST00000468324 UNC13AQ9UPW8 1703 aa27.18■■□□□ 1.94
PCBP4-207ENST00000468324 SCRIBQ14160 1630 aa27.06■■□□□ 1.92
PCBP4-207ENST00000468324 PABPN1Q86U42 306 aaKnown RBP eCLIP26.9■■□□□ 1.9
PCBP4-207ENST00000468324 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
PCBP4-207ENST00000468324 SHROOM4Q9ULL8 1493 aa26.51■■□□□ 1.83
PCBP4-207ENST00000468324 DNAJC5BQ9UF47 199 aa26.18■■□□□ 1.78
PCBP4-207ENST00000468324 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
PCBP4-207ENST00000468324 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
PCBP4-207ENST00000468324 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
PCBP4-207ENST00000468324 SMARCA4P51532 1647 aa25.84■■□□□ 1.73
PCBP4-207ENST00000468324 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
PCBP4-207ENST00000468324 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
PCBP4-207ENST00000468324 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
PCBP4-207ENST00000468324 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
PCBP4-207ENST00000468324 NCAPD3P42695 1498 aa25.5■■□□□ 1.67
PCBP4-207ENST00000468324 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
PCBP4-207ENST00000468324 WIZO95785 1651 aa25.46■■□□□ 1.67
PCBP4-207ENST00000468324 HMGXB3Q12766 1538 aa25.46■■□□□ 1.67
PCBP4-207ENST00000468324 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
PCBP4-207ENST00000468324 RSF1Q96T23 1441 aaPredicted RBP25.42■■□□□ 1.66
PCBP4-207ENST00000468324 TOP2AP11388 1531 aaKnown RBP25.16■■□□□ 1.62
PCBP4-207ENST00000468324 NESP48681 1621 aa24.97■■□□□ 1.59
PCBP4-207ENST00000468324 SUPT5HO00267 1087 aaKnown RBP24.95■■□□□ 1.58
PCBP4-207ENST00000468324 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
PCBP4-207ENST00000468324 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
PCBP4-207ENST00000468324 CADPSQ9ULU8 1353 aa24.79■■□□□ 1.56
PCBP4-207ENST00000468324 ERCC6Q03468 1493 aa24.77■■□□□ 1.56
PCBP4-207ENST00000468324 KIF21AQ7Z4S6 1674 aa24.71■■□□□ 1.55
PCBP4-207ENST00000468324 CFTRP13569 1480 aa24.69■■□□□ 1.54
PCBP4-207ENST00000468324 PDS5BQ9NTI5 1447 aa24.64■■□□□ 1.54
PCBP4-207ENST00000468324 PRDM2Q13029 1718 aa24.63■■□□□ 1.53
PCBP4-207ENST00000468324 FANCD2Q9BXW9 1451 aa24.57■■□□□ 1.52
PCBP4-207ENST00000468324 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
PCBP4-207ENST00000468324 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.52
PCBP4-207ENST00000468324 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.5
PCBP4-207ENST00000468324 CUX2O14529 1486 aa24.38■■□□□ 1.49
PCBP4-207ENST00000468324 WDR62O43379 1518 aa24.35■■□□□ 1.49
PCBP4-207ENST00000468324 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
PCBP4-207ENST00000468324 TOPBP1Q92547 1522 aa24.2■■□□□ 1.46
PCBP4-207ENST00000468324 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
PCBP4-207ENST00000468324 CUX1P39880 1505 aa24.11■■□□□ 1.45
PCBP4-207ENST00000468324 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
PCBP4-207ENST00000468324 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
PCBP4-207ENST00000468324 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
PCBP4-207ENST00000468324 SYNJ1O43426 1573 aa23.98■■□□□ 1.43
PCBP4-207ENST00000468324 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.43
PCBP4-207ENST00000468324 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
PCBP4-207ENST00000468324 BIVM-ERCC5R4GMW8 1640 aa23.93■■□□□ 1.42
PCBP4-207ENST00000468324 TOP2BQ02880 1626 aa23.92■■□□□ 1.42
PCBP4-207ENST00000468324 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
PCBP4-207ENST00000468324 RAD54L2Q9Y4B4 1467 aa23.92■■□□□ 1.42
PCBP4-207ENST00000468324 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
PCBP4-207ENST00000468324 SOGA1O94964 1423 aa23.86■■□□□ 1.41
PCBP4-207ENST00000468324 EIF4G3O43432 1585 aaKnown RBP23.84■■□□□ 1.41
PCBP4-207ENST00000468324 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
PCBP4-207ENST00000468324 AQRO60306 1485 aaKnown RBP eCLIP23.76■■□□□ 1.39
PCBP4-207ENST00000468324 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
PCBP4-207ENST00000468324 ABCA10Q8WWZ4 1543 aa23.71■■□□□ 1.39
PCBP4-207ENST00000468324 ABCA5Q8WWZ7 1642 aa23.66■■□□□ 1.38
PCBP4-207ENST00000468324 PBRM1Q86U86 1689 aa23.64■■□□□ 1.38
PCBP4-207ENST00000468324 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
PCBP4-207ENST00000468324 GRIN2BQ13224 1484 aa23.58■■□□□ 1.37
PCBP4-207ENST00000468324 SNAPC4Q5SXM2 1469 aa23.58■■□□□ 1.37
PCBP4-207ENST00000468324 CHD1O14646 1710 aa23.55■■□□□ 1.36
PCBP4-207ENST00000468324 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
PCBP4-207ENST00000468324 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
PCBP4-207ENST00000468324 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
PCBP4-207ENST00000468324 FBLN2P98095 1184 aa23.44■■□□□ 1.34
PCBP4-207ENST00000468324 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
PCBP4-207ENST00000468324 ERICH3Q5RHP9 1530 aa23.43■■□□□ 1.34
PCBP4-207ENST00000468324 SYNJ2O15056 1496 aa23.41■■□□□ 1.34
PCBP4-207ENST00000468324 DNAJC5Q9H3Z4 198 aa23.38■■□□□ 1.33
PCBP4-207ENST00000468324 OSCARQ8IYS5 282 aa23.36■■□□□ 1.33
PCBP4-207ENST00000468324 CHMP7Q8WUX9 453 aaPredicted RBP23.35■■□□□ 1.33
PCBP4-207ENST00000468324 RUSC2Q8N2Y8 1516 aa23.34■■□□□ 1.33
PCBP4-207ENST00000468324 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
PCBP4-207ENST00000468324 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.32
PCBP4-207ENST00000468324 CUL7Q14999 1698 aa23.3■■□□□ 1.32
PCBP4-207ENST00000468324 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
PCBP4-207ENST00000468324 IGF1RP08069 1367 aa23.29■■□□□ 1.32
PCBP4-207ENST00000468324 CLASP1Q7Z460 1538 aa23.22■■□□□ 1.31
PCBP4-207ENST00000468324 CEP170Q5SW79 1584 aa23.22■■□□□ 1.31
PCBP4-207ENST00000468324 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
PCBP4-207ENST00000468324 NUP160Q12769 1436 aa23.16■■□□□ 1.3
PCBP4-207ENST00000468324 FAM9AQ8IZU1 332 aaPredicted RBP23.1■■□□□ 1.29
PCBP4-207ENST00000468324 RIMBP3CA6NJZ7 1639 aa23.09■■□□□ 1.29
PCBP4-207ENST00000468324 RIMBP3BA6NNM3 1639 aa23.09■■□□□ 1.29
PCBP4-207ENST00000468324 RIMBP3Q9UFD9 1639 aa23.09■■□□□ 1.29
PCBP4-207ENST00000468324 ARHGEF11O15085 1522 aa23.08■■□□□ 1.29
PCBP4-207ENST00000468324 RAPGEF2Q9Y4G8 1499 aa23.07■■□□□ 1.28
PCBP4-207ENST00000468324 EEA1Q15075 1411 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms