RNA–Protein interactions for RNA: ENST00000574953.5

RPH3AL-215, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS ALT2 TSL 5

Gene RPH3AL, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-215ENST00000574953 NISCHQ9Y2I1 1504 aa37.88■■■■□ 3.65
RPH3AL-215ENST00000574953 ABCC9O60706 1549 aa34.09■■■■□ 3.05
RPH3AL-215ENST00000574953 CCDC180Q9P1Z9 1646 aa33.81■■■■□ 3
RPH3AL-215ENST00000574953 DNAJC5BQ9UF47 199 aa32.32■■■□□ 2.76
RPH3AL-215ENST00000574953 RB1CC1Q8TDY2 1594 aa32.24■■■□□ 2.75
RPH3AL-215ENST00000574953 NACADO15069 1562 aa31.9■■■□□ 2.7
RPH3AL-215ENST00000574953 DCAF8L2P0C7V8 631 aa31.8■■■□□ 2.68
RPH3AL-215ENST00000574953 UNC13AQ9UPW8 1703 aa31.71■■■□□ 2.67
RPH3AL-215ENST00000574953 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
RPH3AL-215ENST00000574953 ZCCHC6Q5VYS8 1495 aaKnown RBP31.54■■■□□ 2.64
RPH3AL-215ENST00000574953 MYO15BQ96JP2 1530 aa31.49■■■□□ 2.63
RPH3AL-215ENST00000574953 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
RPH3AL-215ENST00000574953 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
RPH3AL-215ENST00000574953 SCRIBQ14160 1630 aa30.84■■■□□ 2.53
RPH3AL-215ENST00000574953 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.52
RPH3AL-215ENST00000574953 CC2D2AQ9P2K1 1620 aa30.8■■■□□ 2.52
RPH3AL-215ENST00000574953 CECR2Q9BXF3 1484 aa30.71■■■□□ 2.51
RPH3AL-215ENST00000574953 EIF4G1Q04637 1599 aaKnown RBP30.63■■■□□ 2.49
RPH3AL-215ENST00000574953 DNAJC5Q9H3Z4 198 aa29.87■■■□□ 2.37
RPH3AL-215ENST00000574953 CUX2O14529 1486 aa29.48■■■□□ 2.31
RPH3AL-215ENST00000574953 SMARCA4P51532 1647 aa29.45■■■□□ 2.31
RPH3AL-215ENST00000574953 BAZ1AQ9NRL2 1556 aaPredicted RBP29.44■■■□□ 2.3
RPH3AL-215ENST00000574953 NCAPD3P42695 1498 aa29.44■■■□□ 2.3
RPH3AL-215ENST00000574953 ERCC6Q03468 1493 aa29.4■■■□□ 2.3
RPH3AL-215ENST00000574953 ATAD2BQ9ULI0 1458 aa29.33■■■□□ 2.29
RPH3AL-215ENST00000574953 SMARCA2P51531 1590 aa29.31■■■□□ 2.28
RPH3AL-215ENST00000574953 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
RPH3AL-215ENST00000574953 NESP48681 1621 aa29.21■■■□□ 2.27
RPH3AL-215ENST00000574953 MROH2BQ7Z745 1585 aa29.16■■■□□ 2.26
RPH3AL-215ENST00000574953 PEG3Q9GZU2 1588 aa29.11■■■□□ 2.25
RPH3AL-215ENST00000574953 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
RPH3AL-215ENST00000574953 THOC2Q8NI27 1593 aaKnown RBP29.04■■■□□ 2.24
RPH3AL-215ENST00000574953 WIZO95785 1651 aa28.91■■■□□ 2.22
RPH3AL-215ENST00000574953 KIF21AQ7Z4S6 1674 aa28.89■■■□□ 2.21
RPH3AL-215ENST00000574953 LAMC3Q9Y6N6 1575 aa28.88■■■□□ 2.21
RPH3AL-215ENST00000574953 RSF1Q96T23 1441 aaPredicted RBP28.8■■■□□ 2.2
RPH3AL-215ENST00000574953 PDS5BQ9NTI5 1447 aa28.63■■■□□ 2.17
RPH3AL-215ENST00000574953 TOP2AP11388 1531 aaKnown RBP28.62■■■□□ 2.17
RPH3AL-215ENST00000574953 CADPSQ9ULU8 1353 aa28.5■■■□□ 2.15
RPH3AL-215ENST00000574953 MRC2Q9UBG0 1479 aa28.5■■■□□ 2.15
RPH3AL-215ENST00000574953 WDR62O43379 1518 aa28.48■■■□□ 2.15
RPH3AL-215ENST00000574953 TRIM41Q8WV44 630 aa28.42■■■□□ 2.14
RPH3AL-215ENST00000574953 CEP164Q9UPV0 1460 aa28.29■■■□□ 2.12
RPH3AL-215ENST00000574953 FANCD2Q9BXW9 1451 aa28.23■■■□□ 2.11
RPH3AL-215ENST00000574953 CCDC88BA6NC98 1476 aa28.22■■■□□ 2.11
RPH3AL-215ENST00000574953 CFTRP13569 1480 aa28.21■■■□□ 2.11
RPH3AL-215ENST00000574953 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
RPH3AL-215ENST00000574953 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
RPH3AL-215ENST00000574953 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.09
RPH3AL-215ENST00000574953 OSCARQ8IYS5 282 aa27.97■■■□□ 2.07
RPH3AL-215ENST00000574953 RIMBP3CA6NJZ7 1639 aa27.86■■■□□ 2.05
RPH3AL-215ENST00000574953 RIMBP3BA6NNM3 1639 aa27.86■■■□□ 2.05
RPH3AL-215ENST00000574953 RIMBP3Q9UFD9 1639 aa27.86■■■□□ 2.05
RPH3AL-215ENST00000574953 ZNF608Q9ULD9 1512 aaPredicted RBP27.8■■■□□ 2.04
RPH3AL-215ENST00000574953 IFT140Q96RY7 1462 aa27.72■■■□□ 2.03
RPH3AL-215ENST00000574953 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
RPH3AL-215ENST00000574953 ARHGEF11O15085 1522 aa27.68■■■□□ 2.02
RPH3AL-215ENST00000574953 TOPBP1Q92547 1522 aa27.67■■■□□ 2.02
RPH3AL-215ENST00000574953 EIF4G3O43432 1585 aaKnown RBP27.67■■■□□ 2.02
RPH3AL-215ENST00000574953 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
RPH3AL-215ENST00000574953 CHD1O14646 1710 aa27.58■■■□□ 2.01
RPH3AL-215ENST00000574953 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
RPH3AL-215ENST00000574953 AQRO60306 1485 aaKnown RBP eCLIP27.45■■□□□ 1.99
RPH3AL-215ENST00000574953 ARAP1Q96P48 1450 aa27.4■■□□□ 1.98
RPH3AL-215ENST00000574953 POLA1P09884 1462 aaPredicted RBP27.39■■□□□ 1.98
RPH3AL-215ENST00000574953 CYB5RLQ6IPT4 315 aa27.39■■□□□ 1.98
RPH3AL-215ENST00000574953 CUX1P39880 1505 aa27.38■■□□□ 1.97
RPH3AL-215ENST00000574953 FGD5Q6ZNL6 1462 aa27.35■■□□□ 1.97
RPH3AL-215ENST00000574953 SOGA1O94964 1423 aa27.31■■□□□ 1.96
RPH3AL-215ENST00000574953 RAD54L2Q9Y4B4 1467 aa27.29■■□□□ 1.96
RPH3AL-215ENST00000574953 FBLN2P98095 1184 aa27.25■■□□□ 1.95
RPH3AL-215ENST00000574953 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
RPH3AL-215ENST00000574953 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
RPH3AL-215ENST00000574953 BIVM-ERCC5R4GMW8 1640 aa27.2■■□□□ 1.95
RPH3AL-215ENST00000574953 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
RPH3AL-215ENST00000574953 CLASP1Q7Z460 1538 aa27.19■■□□□ 1.94
RPH3AL-215ENST00000574953 TDRD9Q8NDG6 1382 aaKnown RBP27.19■■□□□ 1.94
RPH3AL-215ENST00000574953 TOP2BQ02880 1626 aa27.19■■□□□ 1.94
RPH3AL-215ENST00000574953 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
RPH3AL-215ENST00000574953 SYNJ1O43426 1573 aa27.14■■□□□ 1.94
RPH3AL-215ENST00000574953 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
RPH3AL-215ENST00000574953 MAGI1Q96QZ7 1491 aaPredicted RBP27.05■■□□□ 1.92
RPH3AL-215ENST00000574953 PBRM1Q86U86 1689 aa27.02■■□□□ 1.92
RPH3AL-215ENST00000574953 GRIN2BQ13224 1484 aa27.01■■□□□ 1.91
RPH3AL-215ENST00000574953 GAPVD1Q14C86 1478 aa27.01■■□□□ 1.91
RPH3AL-215ENST00000574953 ABCA5Q8WWZ7 1642 aa26.98■■□□□ 1.91
RPH3AL-215ENST00000574953 CHMP7Q8WUX9 453 aaPredicted RBP26.97■■□□□ 1.91
RPH3AL-215ENST00000574953 SYNJ2O15056 1496 aa26.97■■□□□ 1.91
RPH3AL-215ENST00000574953 ERCC6L2Q5T890 1561 aa26.79■■□□□ 1.88
RPH3AL-215ENST00000574953 ERICH3Q5RHP9 1530 aa26.78■■□□□ 1.88
RPH3AL-215ENST00000574953 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
RPH3AL-215ENST00000574953 KIF27Q86VH2 1401 aa26.72■■□□□ 1.87
RPH3AL-215ENST00000574953 GRIN2AQ12879 1464 aa26.69■■□□□ 1.86
RPH3AL-215ENST00000574953 FHAD1B1AJZ9 1412 aa26.69■■□□□ 1.86
RPH3AL-215ENST00000574953 CEP170Q5SW79 1584 aa26.68■■□□□ 1.86
RPH3AL-215ENST00000574953 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
RPH3AL-215ENST00000574953 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
RPH3AL-215ENST00000574953 NUP160Q12769 1436 aa26.61■■□□□ 1.85
RPH3AL-215ENST00000574953 CUL7Q14999 1698 aa26.6■■□□□ 1.85
RPH3AL-215ENST00000574953 KIF13AQ9H1H9 1805 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms