RNA–Protein interactions for RNA: ENST00000429789.6

CHID1-202, Transcript of chitinase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CHID1, Length 1,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-202ENST00000429789 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.19
CHID1-202ENST00000429789 ABCC9O60706 1549 aa31.6■■■□□ 2.65
CHID1-202ENST00000429789 CCDC180Q9P1Z9 1646 aa31.47■■■□□ 2.63
CHID1-202ENST00000429789 RB1CC1Q8TDY2 1594 aa30.03■■■□□ 2.4
CHID1-202ENST00000429789 NACADO15069 1562 aa29.79■■■□□ 2.36
CHID1-202ENST00000429789 DNAJC5BQ9UF47 199 aa29.76■■■□□ 2.35
CHID1-202ENST00000429789 DCAF8L2P0C7V8 631 aa29.65■■■□□ 2.34
CHID1-202ENST00000429789 PABPN1Q86U42 306 aaKnown RBP eCLIP29.41■■■□□ 2.3
CHID1-202ENST00000429789 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
CHID1-202ENST00000429789 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
CHID1-202ENST00000429789 BICRAQ9NZM4 1560 aa29.14■■■□□ 2.26
CHID1-202ENST00000429789 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
CHID1-202ENST00000429789 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
CHID1-202ENST00000429789 SHROOM4Q9ULL8 1493 aa28.74■■■□□ 2.19
CHID1-202ENST00000429789 SCRIBQ14160 1630 aa28.66■■■□□ 2.18
CHID1-202ENST00000429789 CC2D2AQ9P2K1 1620 aa28.54■■■□□ 2.16
CHID1-202ENST00000429789 CECR2Q9BXF3 1484 aa28.48■■■□□ 2.15
CHID1-202ENST00000429789 EIF4G1Q04637 1599 aaKnown RBP28.45■■■□□ 2.14
CHID1-202ENST00000429789 NCAPD3P42695 1498 aa27.51■■□□□ 1.99
CHID1-202ENST00000429789 DNAJC5Q9H3Z4 198 aa27.44■■□□□ 1.98
CHID1-202ENST00000429789 ATAD2BQ9ULI0 1458 aa27.39■■□□□ 1.98
CHID1-202ENST00000429789 SMARCA4P51532 1647 aa27.34■■□□□ 1.97
CHID1-202ENST00000429789 SMARCA2P51531 1590 aa27.32■■□□□ 1.96
CHID1-202ENST00000429789 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
CHID1-202ENST00000429789 CUX2O14529 1486 aa27.29■■□□□ 1.96
CHID1-202ENST00000429789 HMGXB3Q12766 1538 aa27.27■■□□□ 1.96
CHID1-202ENST00000429789 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
CHID1-202ENST00000429789 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
CHID1-202ENST00000429789 NESP48681 1621 aa27.11■■□□□ 1.93
CHID1-202ENST00000429789 PEG3Q9GZU2 1588 aa27.06■■□□□ 1.92
CHID1-202ENST00000429789 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
CHID1-202ENST00000429789 LAMC3Q9Y6N6 1575 aa26.91■■□□□ 1.9
CHID1-202ENST00000429789 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
CHID1-202ENST00000429789 PDS5BQ9NTI5 1447 aa26.76■■□□□ 1.87
CHID1-202ENST00000429789 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
CHID1-202ENST00000429789 CADPSQ9ULU8 1353 aa26.67■■□□□ 1.86
CHID1-202ENST00000429789 WIZO95785 1651 aa26.65■■□□□ 1.86
CHID1-202ENST00000429789 MRC2Q9UBG0 1479 aa26.53■■□□□ 1.84
CHID1-202ENST00000429789 WDR62O43379 1518 aa26.46■■□□□ 1.83
CHID1-202ENST00000429789 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
CHID1-202ENST00000429789 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
CHID1-202ENST00000429789 FANCD2Q9BXW9 1451 aa26.36■■□□□ 1.81
CHID1-202ENST00000429789 CFTRP13569 1480 aa26.33■■□□□ 1.81
CHID1-202ENST00000429789 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
CHID1-202ENST00000429789 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
CHID1-202ENST00000429789 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
CHID1-202ENST00000429789 OSCARQ8IYS5 282 aa26.06■■□□□ 1.76
CHID1-202ENST00000429789 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
CHID1-202ENST00000429789 CCDC88BA6NC98 1476 aa26.01■■□□□ 1.75
CHID1-202ENST00000429789 IFT140Q96RY7 1462 aa25.88■■□□□ 1.73
CHID1-202ENST00000429789 TOPBP1Q92547 1522 aa25.84■■□□□ 1.73
CHID1-202ENST00000429789 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
CHID1-202ENST00000429789 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
CHID1-202ENST00000429789 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
CHID1-202ENST00000429789 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.7
CHID1-202ENST00000429789 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.7
CHID1-202ENST00000429789 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.7
CHID1-202ENST00000429789 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
CHID1-202ENST00000429789 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
CHID1-202ENST00000429789 AQRO60306 1485 aaKnown RBP eCLIP25.6■■□□□ 1.691e-6■■■■■ 31.4
CHID1-202ENST00000429789 ARHGEF11O15085 1522 aa25.6■■□□□ 1.69
CHID1-202ENST00000429789 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
CHID1-202ENST00000429789 CHD1O14646 1710 aa25.54■■□□□ 1.68
CHID1-202ENST00000429789 FBLN2P98095 1184 aa25.49■■□□□ 1.67
CHID1-202ENST00000429789 RAD54L2Q9Y4B4 1467 aa25.48■■□□□ 1.67
CHID1-202ENST00000429789 SOGA1O94964 1423 aa25.46■■□□□ 1.67
CHID1-202ENST00000429789 CYB5RLQ6IPT4 315 aa25.45■■□□□ 1.66
CHID1-202ENST00000429789 TDRD9Q8NDG6 1382 aaKnown RBP25.43■■□□□ 1.66
CHID1-202ENST00000429789 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.65
CHID1-202ENST00000429789 WDR97A6NE52 1622 aa25.36■■□□□ 1.65
CHID1-202ENST00000429789 CUX1P39880 1505 aa25.34■■□□□ 1.65
CHID1-202ENST00000429789 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
CHID1-202ENST00000429789 SNAPC4Q5SXM2 1469 aa25.33■■□□□ 1.65
CHID1-202ENST00000429789 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
CHID1-202ENST00000429789 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
CHID1-202ENST00000429789 GRIN2BQ13224 1484 aa25.25■■□□□ 1.63
CHID1-202ENST00000429789 CLASP1Q7Z460 1538 aa25.22■■□□□ 1.63
CHID1-202ENST00000429789 TRHP20396 242 aaPredicted RBP25.22■■□□□ 1.63
CHID1-202ENST00000429789 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
CHID1-202ENST00000429789 SYNJ2O15056 1496 aa25.18■■□□□ 1.62
CHID1-202ENST00000429789 GAPVD1Q14C86 1478 aa25.15■■□□□ 1.62
CHID1-202ENST00000429789 SUPT5HO00267 1087 aaKnown RBP25.14■■□□□ 1.62
CHID1-202ENST00000429789 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
CHID1-202ENST00000429789 ABCA10Q8WWZ4 1543 aa25.1■■□□□ 1.61
CHID1-202ENST00000429789 ABCA5Q8WWZ7 1642 aa25.06■■□□□ 1.6
CHID1-202ENST00000429789 WRNQ14191 1432 aaPredicted RBP eCLIP24.98■■□□□ 1.591e-9■■■■■ 46
CHID1-202ENST00000429789 GRIN2AQ12879 1464 aa24.92■■□□□ 1.58
CHID1-202ENST00000429789 TOP2BQ02880 1626 aa24.91■■□□□ 1.58
CHID1-202ENST00000429789 BIVM-ERCC5R4GMW8 1640 aa24.91■■□□□ 1.58
CHID1-202ENST00000429789 ADAMTS12P58397 1594 aa24.88■■□□□ 1.57
CHID1-202ENST00000429789 NUP160Q12769 1436 aa24.85■■□□□ 1.57
CHID1-202ENST00000429789 CEP170Q5SW79 1584 aa24.84■■□□□ 1.57
CHID1-202ENST00000429789 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.57
CHID1-202ENST00000429789 ERCC6L2Q5T890 1561 aa24.82■■□□□ 1.56
CHID1-202ENST00000429789 ERICH3Q5RHP9 1530 aa24.78■■□□□ 1.56
CHID1-202ENST00000429789 SHROOM2Q13796 1616 aa24.75■■□□□ 1.55
CHID1-202ENST00000429789 PRG4Q92954 1404 aaPredicted RBP24.62■■□□□ 1.53
CHID1-202ENST00000429789 JPH4Q96JJ6 628 aa24.62■■□□□ 1.53
CHID1-202ENST00000429789 AEBP2Q6ZN18 517 aaPredicted RBP24.58■■□□□ 1.53
CHID1-202ENST00000429789 RUSC2Q8N2Y8 1516 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms