RNA–Protein interactions for RNA: ENST00000357327.9

TNIK-203, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-203ENST00000357327 NISCHQ9Y2I1 1504 aa16.79■□□□□ 0.28
TNIK-203ENST00000357327 PELP1Q8IZL8 1130 aaKnown RBP16.18■□□□□ 0.18
TNIK-203ENST00000357327 HRCP23327 699 aa15.99■□□□□ 0.15
TNIK-203ENST00000357327 MYT1Q01538 1121 aa15.77■□□□□ 0.11
TNIK-203ENST00000357327 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
TNIK-203ENST00000357327 DCAF8L2P0C7V8 631 aa15.6■□□□□ 0.09
TNIK-203ENST00000357327 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
TNIK-203ENST00000357327 PPARGC1BQ86YN6 1023 aaKnown RBP15.51■□□□□ 0.07
TNIK-203ENST00000357327 SHROOM4Q9ULL8 1493 aa15.37■□□□□ 0.05
TNIK-203ENST00000357327 ZEB1P37275 1124 aaPredicted RBP15.35■□□□□ 0.05
TNIK-203ENST00000357327 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
TNIK-203ENST00000357327 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
TNIK-203ENST00000357327 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
TNIK-203ENST00000357327 CENPBP07199 599 aaPredicted RBP15.08■□□□□ 0
TNIK-203ENST00000357327 DCAF1Q9Y4B6 1507 aa14.95□□□□□ -0.02
TNIK-203ENST00000357327 ACIN1Q9UKV3 1341 aaKnown RBP14.9□□□□□ -0.02
TNIK-203ENST00000357327 MYO15BQ96JP2 1530 aa14.88□□□□□ -0.03
TNIK-203ENST00000357327 LOC105371045A0A1W2PR82 267 aa14.85□□□□□ -0.03
TNIK-203ENST00000357327 GTF3C3Q9Y5Q9 886 aa14.82□□□□□ -0.04
TNIK-203ENST00000357327 TTBK1Q5TCY1 1321 aaPredicted RBP14.75□□□□□ -0.05
TNIK-203ENST00000357327 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
TNIK-203ENST00000357327 NEUROD1Q13562 356 aa14.71□□□□□ -0.05
TNIK-203ENST00000357327 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
TNIK-203ENST00000357327 CCER1Q8TC90 406 aaPredicted RBP14.67□□□□□ -0.06
TNIK-203ENST00000357327 DIEXFQ68CQ4 756 aaKnown RBP14.63□□□□□ -0.07
TNIK-203ENST00000357327 YTHDC1Q96MU7 727 aaKnown RBP14.51□□□□□ -0.09
TNIK-203ENST00000357327 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
TNIK-203ENST00000357327 TRIM41Q8WV44 630 aa14.46□□□□□ -0.1
TNIK-203ENST00000357327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.43□□□□□ -0.1
TNIK-203ENST00000357327 ZNF316A6NFI3 1004 aaPredicted RBP14.29□□□□□ -0.12
TNIK-203ENST00000357327 BCL11AQ9H165 835 aa14.25□□□□□ -0.13
TNIK-203ENST00000357327 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
TNIK-203ENST00000357327 CLSPNQ9HAW4 1339 aa14.24□□□□□ -0.13
TNIK-203ENST00000357327 ANP32EQ9BTT0 268 aa14.22□□□□□ -0.13
TNIK-203ENST00000357327 ERICH6Q7L0X2 663 aa14.08□□□□□ -0.16
TNIK-203ENST00000357327 MIER1Q8N108 512 aa14.07□□□□□ -0.16
TNIK-203ENST00000357327 NEFLP07196 543 aa14□□□□□ -0.17
TNIK-203ENST00000357327 SUPT16HQ9Y5B9 1047 aaKnown RBP13.95□□□□□ -0.18
TNIK-203ENST00000357327 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
TNIK-203ENST00000357327 TSHZ2Q9NRE2 1034 aa13.91□□□□□ -0.18
TNIK-203ENST00000357327 APLP2Q06481 763 aa13.9□□□□□ -0.18
TNIK-203ENST00000357327 RANGAP1P46060 587 aaPredicted RBP13.88□□□□□ -0.19
TNIK-203ENST00000357327 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
TNIK-203ENST00000357327 BCANQ96GW7 911 aa13.84□□□□□ -0.19
TNIK-203ENST00000357327 UBTFP17480 764 aaKnown RBP13.81□□□□□ -0.2
TNIK-203ENST00000357327 MYT1LQ9UL68 1186 aa13.81□□□□□ -0.2
TNIK-203ENST00000357327 FKBP8Q14318 412 aa13.75□□□□□ -0.21
TNIK-203ENST00000357327 PRKCSHP14314 528 aaPredicted RBP13.69□□□□□ -0.22
TNIK-203ENST00000357327 RBM19Q9Y4C8 960 aaKnown RBP13.67□□□□□ -0.22
TNIK-203ENST00000357327 CDK11AQ9UQ88 783 aaPredicted RBP13.66□□□□□ -0.22
TNIK-203ENST00000357327 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
TNIK-203ENST00000357327 WRNQ14191 1432 aaPredicted RBP eCLIP13.58□□□□□ -0.24
TNIK-203ENST00000357327 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
TNIK-203ENST00000357327 RTL5Q5HYW3 569 aaPredicted RBP13.56□□□□□ -0.24
TNIK-203ENST00000357327 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
TNIK-203ENST00000357327 ABCC9O60706 1549 aa13.52□□□□□ -0.24
TNIK-203ENST00000357327 ITGAEP38570 1179 aa13.52□□□□□ -0.24
TNIK-203ENST00000357327 TNIKQ9UKE5 1360 aa13.5□□□□□ -0.25
TNIK-203ENST00000357327 DEKP35659 375 aaKnown RBP13.49□□□□□ -0.25
TNIK-203ENST00000357327 ANP32CO43423 234 aa13.47□□□□□ -0.25
TNIK-203ENST00000357327 FANCIQ9NVI1 1328 aa13.44□□□□□ -0.26
TNIK-203ENST00000357327 TRIM52Q96A61 297 aa13.4□□□□□ -0.26
TNIK-203ENST00000357327 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.26
TNIK-203ENST00000357327 ERICH6BQ5W0A0 696 aa13.39□□□□□ -0.27
TNIK-203ENST00000357327 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
TNIK-203ENST00000357327 EEA1Q15075 1411 aa13.38□□□□□ -0.27
TNIK-203ENST00000357327 NBR1Q14596 966 aa13.38□□□□□ -0.27
TNIK-203ENST00000357327 ATP1B4Q9UN42 357 aaPredicted RBP13.38□□□□□ -0.27
TNIK-203ENST00000357327 ANP32AP39687 249 aaKnown RBP13.33□□□□□ -0.27
TNIK-203ENST00000357327 GOLGA3Q08378 1498 aa13.32□□□□□ -0.28
TNIK-203ENST00000357327 MSH5O43196 834 aa13.31□□□□□ -0.28
TNIK-203ENST00000357327 NOP58Q9Y2X3 529 aaKnown RBP13.31□□□□□ -0.28
TNIK-203ENST00000357327 KCNH8Q96L42 1107 aa13.3□□□□□ -0.28
TNIK-203ENST00000357327 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
TNIK-203ENST00000357327 SCRIBQ14160 1630 aa13.29□□□□□ -0.28
TNIK-203ENST00000357327 CLIP1P30622 1438 aa13.28□□□□□ -0.28
TNIK-203ENST00000357327 HNRNPUQ00839 825 aaKnown RBP eCLIP13.28□□□□□ -0.28
TNIK-203ENST00000357327 ANO8Q9HCE9 1232 aaPredicted RBP13.28□□□□□ -0.28
TNIK-203ENST00000357327 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
TNIK-203ENST00000357327 PPP4R2Q9NY27 417 aa13.26□□□□□ -0.29
TNIK-203ENST00000357327 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
TNIK-203ENST00000357327 DHX57Q6P158 1386 aaKnown RBP13.25□□□□□ -0.29
TNIK-203ENST00000357327 EIF5BO60841 1220 aaKnown RBP13.23□□□□□ -0.29
TNIK-203ENST00000357327 SOGA1O94964 1423 aa13.21□□□□□ -0.3
TNIK-203ENST00000357327 VPS8Q8N3P4 1428 aa13.19□□□□□ -0.3
TNIK-203ENST00000357327 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
TNIK-203ENST00000357327 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
TNIK-203ENST00000357327 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
TNIK-203ENST00000357327 SALL2Q9Y467 1007 aaPredicted RBP13.14□□□□□ -0.31
TNIK-203ENST00000357327 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
TNIK-203ENST00000357327 CCDC136Q96JN2 1154 aa13.13□□□□□ -0.31
TNIK-203ENST00000357327 GLIPR1L2Q4G1C9 344 aa13.11□□□□□ -0.31
TNIK-203ENST00000357327 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
TNIK-203ENST00000357327 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
TNIK-203ENST00000357327 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.1□□□□□ -0.31
TNIK-203ENST00000357327 B4GALNT3Q6L9W6 998 aa13.1□□□□□ -0.31
TNIK-203ENST00000357327 ABCC8Q09428 1581 aa13.09□□□□□ -0.31
TNIK-203ENST00000357327 HIRIP3Q9BW71 556 aaPredicted RBP13.09□□□□□ -0.31
TNIK-203ENST00000357327 IPO9Q96P70 1041 aaKnown RBP13.08□□□□□ -0.31
TNIK-203ENST00000357327 MROH2BQ7Z745 1585 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms