RNA–Protein interactions for RNA: ENST00000488470.5

TNIK-214, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 3,918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-214ENST00000488470 NISCHQ9Y2I1 1504 aa18.22■□□□□ 0.51
TNIK-214ENST00000488470 DCAF8L2P0C7V8 631 aa17.98■□□□□ 0.47
TNIK-214ENST00000488470 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
TNIK-214ENST00000488470 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
TNIK-214ENST00000488470 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
TNIK-214ENST00000488470 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
TNIK-214ENST00000488470 FAM9AQ8IZU1 332 aaPredicted RBP16.84■□□□□ 0.29
TNIK-214ENST00000488470 PPARGC1BQ86YN6 1023 aaKnown RBP16.75■□□□□ 0.27
TNIK-214ENST00000488470 TTBK1Q5TCY1 1321 aaPredicted RBP16.7■□□□□ 0.26
TNIK-214ENST00000488470 HRCP23327 699 aa16.61■□□□□ 0.25
TNIK-214ENST00000488470 LOC105371045A0A1W2PR82 267 aa16.58■□□□□ 0.24
TNIK-214ENST00000488470 CHIC1Q5VXU3 224 aa16.46■□□□□ 0.23
TNIK-214ENST00000488470 TRIM41Q8WV44 630 aa16.29■□□□□ 0.2
TNIK-214ENST00000488470 CCER1Q8TC90 406 aaPredicted RBP16.24■□□□□ 0.19
TNIK-214ENST00000488470 TRIM26Q12899 539 aaPredicted RBP16.18■□□□□ 0.18
TNIK-214ENST00000488470 RANGAP1P46060 587 aaPredicted RBP16.17■□□□□ 0.18
TNIK-214ENST00000488470 YTHDC1Q96MU7 727 aaKnown RBP16.17■□□□□ 0.18
TNIK-214ENST00000488470 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.16
TNIK-214ENST00000488470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
TNIK-214ENST00000488470 CENPBP07199 599 aaPredicted RBP15.99■□□□□ 0.15
TNIK-214ENST00000488470 PELP1Q8IZL8 1130 aaKnown RBP15.92■□□□□ 0.14
TNIK-214ENST00000488470 APLP2Q06481 763 aa15.88■□□□□ 0.13
TNIK-214ENST00000488470 UBTFP17480 764 aaKnown RBP15.88■□□□□ 0.13
TNIK-214ENST00000488470 MYO15BQ96JP2 1530 aa15.77■□□□□ 0.11
TNIK-214ENST00000488470 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
TNIK-214ENST00000488470 DIEXFQ68CQ4 756 aaKnown RBP15.7■□□□□ 0.1
TNIK-214ENST00000488470 GTF3C3Q9Y5Q9 886 aa15.7■□□□□ 0.1
TNIK-214ENST00000488470 SCAF1Q9H7N4 1312 aaKnown RBP15.59■□□□□ 0.09
TNIK-214ENST00000488470 ITGAEP38570 1179 aa15.57■□□□□ 0.08
TNIK-214ENST00000488470 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
TNIK-214ENST00000488470 NEUROD1Q13562 356 aa15.48■□□□□ 0.07
TNIK-214ENST00000488470 ACIN1Q9UKV3 1341 aaKnown RBP15.48■□□□□ 0.07
TNIK-214ENST00000488470 BCANQ96GW7 911 aa15.36■□□□□ 0.05
TNIK-214ENST00000488470 DCAF1Q9Y4B6 1507 aa15.31■□□□□ 0.04
TNIK-214ENST00000488470 CNGB1Q14028 1251 aaPredicted RBP15.31■□□□□ 0.04
TNIK-214ENST00000488470 ERICH6Q7L0X2 663 aa15.3■□□□□ 0.04
TNIK-214ENST00000488470 NEFLP07196 543 aa15.27■□□□□ 0.04
TNIK-214ENST00000488470 MYT1Q01538 1121 aa15.27■□□□□ 0.03
TNIK-214ENST00000488470 ZNF316A6NFI3 1004 aaPredicted RBP15.26■□□□□ 0.03
TNIK-214ENST00000488470 ZCCHC6Q5VYS8 1495 aaKnown RBP15.21■□□□□ 0.02
TNIK-214ENST00000488470 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
TNIK-214ENST00000488470 MIER1Q8N108 512 aa15.13■□□□□ 0.01
TNIK-214ENST00000488470 ABCC9O60706 1549 aa15.09■□□□□ 0.01
TNIK-214ENST00000488470 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
TNIK-214ENST00000488470 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
TNIK-214ENST00000488470 FAM50AQ14320 339 aaKnown RBP15□□□□□ -0.01
TNIK-214ENST00000488470 HIRIP3Q9BW71 556 aaPredicted RBP14.92□□□□□ -0.02
TNIK-214ENST00000488470 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
TNIK-214ENST00000488470 P3H3Q8IVL6 736 aa14.89□□□□□ -0.03
TNIK-214ENST00000488470 FKBP8Q14318 412 aa14.88□□□□□ -0.03
TNIK-214ENST00000488470 RSF1Q96T23 1441 aaPredicted RBP14.87□□□□□ -0.03
TNIK-214ENST00000488470 DDX10Q13206 875 aaKnown RBP14.86□□□□□ -0.03
TNIK-214ENST00000488470 TRIM52Q96A61 297 aa14.85□□□□□ -0.03
TNIK-214ENST00000488470 CCDC180Q9P1Z9 1646 aa14.82□□□□□ -0.04
TNIK-214ENST00000488470 IRX6P78412 446 aaPredicted RBP14.77□□□□□ -0.04
TNIK-214ENST00000488470 ANP32CO43423 234 aa14.75□□□□□ -0.05
TNIK-214ENST00000488470 ARID3CA6NKF2 412 aa14.74□□□□□ -0.05
TNIK-214ENST00000488470 SENP3-EIF4A1A0A087X0R7 540 aa14.71□□□□□ -0.05
TNIK-214ENST00000488470 CEP162Q5TB80 1403 aa14.7□□□□□ -0.06
TNIK-214ENST00000488470 ZNF326Q5BKZ1 582 aaKnown RBP14.69□□□□□ -0.06
TNIK-214ENST00000488470 CDK11AQ9UQ88 783 aaPredicted RBP14.64□□□□□ -0.07
TNIK-214ENST00000488470 HNRNPUQ00839 825 aaKnown RBP eCLIP14.64□□□□□ -0.07
TNIK-214ENST00000488470 CECR2Q9BXF3 1484 aa14.64□□□□□ -0.07
TNIK-214ENST00000488470 SUPT16HQ9Y5B9 1047 aaKnown RBP14.62□□□□□ -0.07
TNIK-214ENST00000488470 SOGA1O94964 1423 aa14.58□□□□□ -0.08
TNIK-214ENST00000488470 RB1CC1Q8TDY2 1594 aa14.57□□□□□ -0.08
TNIK-214ENST00000488470 FAM9BQ8IZU0 186 aa14.57□□□□□ -0.08
TNIK-214ENST00000488470 CLIP1P30622 1438 aa14.57□□□□□ -0.08
TNIK-214ENST00000488470 SIN3AQ96ST3 1273 aa14.55□□□□□ -0.08
TNIK-214ENST00000488470 RTL5Q5HYW3 569 aaPredicted RBP14.55□□□□□ -0.08
TNIK-214ENST00000488470 KCNH8Q96L42 1107 aa14.53□□□□□ -0.08
TNIK-214ENST00000488470 NBR1Q14596 966 aa14.53□□□□□ -0.08
TNIK-214ENST00000488470 SALL2Q9Y467 1007 aaPredicted RBP14.53□□□□□ -0.08
TNIK-214ENST00000488470 NPM2Q86SE8 214 aaKnown RBP14.52□□□□□ -0.08
TNIK-214ENST00000488470 CHIC2Q9UKJ5 165 aa14.5□□□□□ -0.09
TNIK-214ENST00000488470 DAXXQ9UER7 740 aaPredicted RBP14.49□□□□□ -0.09
TNIK-214ENST00000488470 ANP32EQ9BTT0 268 aa14.48□□□□□ -0.09
TNIK-214ENST00000488470 TNIKQ9UKE5 1360 aa14.45□□□□□ -0.1
TNIK-214ENST00000488470 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
TNIK-214ENST00000488470 TONSLQ96HA7 1378 aa14.43□□□□□ -0.1
TNIK-214ENST00000488470 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
TNIK-214ENST00000488470 KANK4Q5T7N3 995 aaPredicted RBP14.42□□□□□ -0.1
TNIK-214ENST00000488470 TSHZ2Q9NRE2 1034 aa14.41□□□□□ -0.1
TNIK-214ENST00000488470 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
TNIK-214ENST00000488470 GOLGA3Q08378 1498 aa14.37□□□□□ -0.11
TNIK-214ENST00000488470 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
TNIK-214ENST00000488470 MRS2Q9HD23 443 aa14.35□□□□□ -0.11
TNIK-214ENST00000488470 MYT1LQ9UL68 1186 aa14.35□□□□□ -0.11
TNIK-214ENST00000488470 RRP7BPQ9NSQ0 103 aa14.34□□□□□ -0.11
TNIK-214ENST00000488470 WRNQ14191 1432 aaPredicted RBP eCLIP14.34□□□□□ -0.11
TNIK-214ENST00000488470 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
TNIK-214ENST00000488470 ZNF777Q9ULD5 760 aaPredicted RBP14.34□□□□□ -0.11
TNIK-214ENST00000488470 BCL11AQ9H165 835 aa14.33□□□□□ -0.12
TNIK-214ENST00000488470 RUSC2Q8N2Y8 1516 aa14.33□□□□□ -0.12
TNIK-214ENST00000488470 RBM19Q9Y4C8 960 aaKnown RBP14.33□□□□□ -0.12
TNIK-214ENST00000488470 ANP32AP39687 249 aaKnown RBP14.3□□□□□ -0.12
TNIK-214ENST00000488470 B4GALNT3Q6L9W6 998 aa14.3□□□□□ -0.12
TNIK-214ENST00000488470 CCDC136Q96JN2 1154 aa14.29□□□□□ -0.12
TNIK-214ENST00000488470 FBLN2P98095 1184 aa14.27□□□□□ -0.13
TNIK-214ENST00000488470 EIF5BO60841 1220 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms