RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 NISCHQ9Y2I1 1504 aa24.68■■□□□ 1.54
SGMS1-202ENST00000361781 SUPT5HO00267 1087 aaKnown RBP23.44■■□□□ 1.34
SGMS1-202ENST00000361781 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
SGMS1-202ENST00000361781 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
SGMS1-202ENST00000361781 PCGF6Q9BYE7 350 aa22.55■■□□□ 1.2
SGMS1-202ENST00000361781 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
SGMS1-202ENST00000361781 PPARGC1BQ86YN6 1023 aaKnown RBP22.02■■□□□ 1.12
SGMS1-202ENST00000361781 HRCP23327 699 aa22.01■■□□□ 1.11
SGMS1-202ENST00000361781 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
SGMS1-202ENST00000361781 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
SGMS1-202ENST00000361781 LOC105371045A0A1W2PR82 267 aa21.84■■□□□ 1.09
SGMS1-202ENST00000361781 TTBK1Q5TCY1 1321 aaPredicted RBP21.66■■□□□ 1.06
SGMS1-202ENST00000361781 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
SGMS1-202ENST00000361781 TRIM26Q12899 539 aaPredicted RBP21.4■■□□□ 1.02
SGMS1-202ENST00000361781 CCER1Q8TC90 406 aaPredicted RBP21.25■□□□□ 0.99
SGMS1-202ENST00000361781 ZEB1P37275 1124 aaPredicted RBP21.23■□□□□ 0.99
SGMS1-202ENST00000361781 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
SGMS1-202ENST00000361781 YTHDC1Q96MU7 727 aaKnown RBP21.03■□□□□ 0.96
SGMS1-202ENST00000361781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
SGMS1-202ENST00000361781 RANGAP1P46060 587 aaPredicted RBP20.98■□□□□ 0.95
SGMS1-202ENST00000361781 PELP1Q8IZL8 1130 aaKnown RBP20.98■□□□□ 0.95
SGMS1-202ENST00000361781 CENPBP07199 599 aaPredicted RBP20.93■□□□□ 0.94
SGMS1-202ENST00000361781 UBTFP17480 764 aaKnown RBP20.79■□□□□ 0.92
SGMS1-202ENST00000361781 APLP2Q06481 763 aa20.71■□□□□ 0.91
SGMS1-202ENST00000361781 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
SGMS1-202ENST00000361781 DIEXFQ68CQ4 756 aaKnown RBP20.65■□□□□ 0.9
SGMS1-202ENST00000361781 SCAF1Q9H7N4 1312 aaKnown RBP20.62■□□□□ 0.89
SGMS1-202ENST00000361781 GTF3C3Q9Y5Q9 886 aa20.61■□□□□ 0.89
SGMS1-202ENST00000361781 DCAF1Q9Y4B6 1507 aa20.6■□□□□ 0.89
SGMS1-202ENST00000361781 HNRNPUL2Q1KMD3 747 aaKnown RBP20.58■□□□□ 0.88
SGMS1-202ENST00000361781 ACIN1Q9UKV3 1341 aaKnown RBP20.44■□□□□ 0.86
SGMS1-202ENST00000361781 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
SGMS1-202ENST00000361781 ITGAEP38570 1179 aa20.27■□□□□ 0.84
SGMS1-202ENST00000361781 ATP1B4Q9UN42 357 aaPredicted RBP20.18■□□□□ 0.82
SGMS1-202ENST00000361781 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.82
SGMS1-202ENST00000361781 MYT1Q01538 1121 aa20.1■□□□□ 0.81
SGMS1-202ENST00000361781 ABCC9O60706 1549 aa20.09■□□□□ 0.81
SGMS1-202ENST00000361781 SCRIBQ14160 1630 aa20.08■□□□□ 0.81
SGMS1-202ENST00000361781 CCDC180Q9P1Z9 1646 aa20.05■□□□□ 0.8
SGMS1-202ENST00000361781 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
SGMS1-202ENST00000361781 BCANQ96GW7 911 aa19.99■□□□□ 0.79
SGMS1-202ENST00000361781 MIER1Q8N108 512 aa19.95■□□□□ 0.78
SGMS1-202ENST00000361781 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
SGMS1-202ENST00000361781 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
SGMS1-202ENST00000361781 NEFLP07196 543 aa19.88■□□□□ 0.77
SGMS1-202ENST00000361781 ERICH6Q7L0X2 663 aa19.8■□□□□ 0.76
SGMS1-202ENST00000361781 CNGB1Q14028 1251 aaPredicted RBP19.74■□□□□ 0.75
SGMS1-202ENST00000361781 RB1CC1Q8TDY2 1594 aa19.71■□□□□ 0.75
SGMS1-202ENST00000361781 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
SGMS1-202ENST00000361781 CEP162Q5TB80 1403 aa19.63■□□□□ 0.73
SGMS1-202ENST00000361781 FAM50AQ14320 339 aaKnown RBP19.63■□□□□ 0.73
SGMS1-202ENST00000361781 HIRIP3Q9BW71 556 aaPredicted RBP19.52■□□□□ 0.72
SGMS1-202ENST00000361781 FKBP8Q14318 412 aa19.5■□□□□ 0.71
SGMS1-202ENST00000361781 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
SGMS1-202ENST00000361781 POLR3GLQ9BT43 218 aa19.5■□□□□ 0.71
SGMS1-202ENST00000361781 P3H3Q8IVL6 736 aa19.49■□□□□ 0.71
SGMS1-202ENST00000361781 SOGA1O94964 1423 aa19.49■□□□□ 0.71
SGMS1-202ENST00000361781 TRIM52Q96A61 297 aa19.44■□□□□ 0.7
SGMS1-202ENST00000361781 MROH2BQ7Z745 1585 aa19.41■□□□□ 0.7
SGMS1-202ENST00000361781 CLIP1P30622 1438 aa19.4■□□□□ 0.7
SGMS1-202ENST00000361781 ABCC8Q09428 1581 aa19.38■□□□□ 0.69
SGMS1-202ENST00000361781 CCDC88BA6NC98 1476 aa19.37■□□□□ 0.69
SGMS1-202ENST00000361781 TNIKQ9UKE5 1360 aa19.36■□□□□ 0.69
SGMS1-202ENST00000361781 ANP32CO43423 234 aa19.35■□□□□ 0.69
SGMS1-202ENST00000361781 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.68
SGMS1-202ENST00000361781 IRX6P78412 446 aaPredicted RBP19.28■□□□□ 0.68
SGMS1-202ENST00000361781 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
SGMS1-202ENST00000361781 WIZO95785 1651 aa19.22■□□□□ 0.67
SGMS1-202ENST00000361781 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
SGMS1-202ENST00000361781 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.665e-6■■■■■ 29.2
SGMS1-202ENST00000361781 ARID3CA6NKF2 412 aa19.18■□□□□ 0.66
SGMS1-202ENST00000361781 KCNH8Q96L42 1107 aa19.17■□□□□ 0.66
SGMS1-202ENST00000361781 HNRNPUQ00839 825 aaKnown RBP eCLIP19.17■□□□□ 0.66
SGMS1-202ENST00000361781 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
SGMS1-202ENST00000361781 CDK11AQ9UQ88 783 aaPredicted RBP19.16■□□□□ 0.66
SGMS1-202ENST00000361781 KANK4Q5T7N3 995 aaPredicted RBP19.14■□□□□ 0.65
SGMS1-202ENST00000361781 EEA1Q15075 1411 aa19.1■□□□□ 0.65
SGMS1-202ENST00000361781 CLSPNQ9HAW4 1339 aa19.1■□□□□ 0.65
SGMS1-202ENST00000361781 SENP3-EIF4A1A0A087X0R7 540 aa19.1■□□□□ 0.65
SGMS1-202ENST00000361781 ZNF326Q5BKZ1 582 aaKnown RBP19.1■□□□□ 0.65
SGMS1-202ENST00000361781 ANP32EQ9BTT0 268 aa19.09■□□□□ 0.65
SGMS1-202ENST00000361781 TSHZ2Q9NRE2 1034 aa19.05■□□□□ 0.64
SGMS1-202ENST00000361781 FAM9BQ8IZU0 186 aa19.05■□□□□ 0.64
SGMS1-202ENST00000361781 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
SGMS1-202ENST00000361781 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
SGMS1-202ENST00000361781 TONSLQ96HA7 1378 aa19.01■□□□□ 0.63
SGMS1-202ENST00000361781 CHIC2Q9UKJ5 165 aa19■□□□□ 0.63
SGMS1-202ENST00000361781 VPS8Q8N3P4 1428 aa18.97■□□□□ 0.63
SGMS1-202ENST00000361781 NACADO15069 1562 aa18.96■□□□□ 0.63
SGMS1-202ENST00000361781 NBR1Q14596 966 aa18.92■□□□□ 0.62
SGMS1-202ENST00000361781 RTL5Q5HYW3 569 aaPredicted RBP18.91■□□□□ 0.62
SGMS1-202ENST00000361781 RBM19Q9Y4C8 960 aaKnown RBP18.88■□□□□ 0.61
SGMS1-202ENST00000361781 SALL2Q9Y467 1007 aaPredicted RBP18.87■□□□□ 0.61
SGMS1-202ENST00000361781 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
SGMS1-202ENST00000361781 CCNB3Q8WWL7 1395 aa18.86■□□□□ 0.61
SGMS1-202ENST00000361781 RAPGEF2Q9Y4G8 1499 aa18.85■□□□□ 0.61
SGMS1-202ENST00000361781 DHX57Q6P158 1386 aaKnown RBP18.85■□□□□ 0.61
SGMS1-202ENST00000361781 BCL11AQ9H165 835 aa18.84■□□□□ 0.61
SGMS1-202ENST00000361781 RRP7BPQ9NSQ0 103 aa18.83■□□□□ 0.61
SGMS1-202ENST00000361781 MRS2Q9HD23 443 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms