RNA–Protein interactions for RNA: ENST00000584496.1

GRIN2C-205, Transcript of glutamate ionotropic receptor NMDA type subunit 2C, humanhuman

TSL 1 (best)

Gene GRIN2C, Length 1,984 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2C-205ENST00000584496 NISCHQ9Y2I1 1504 aa47.26■■■■■ 5.16
GRIN2C-205ENST00000584496 CCDC180Q9P1Z9 1646 aa40.56■■■■■ 4.08
GRIN2C-205ENST00000584496 ZCCHC6Q5VYS8 1495 aaKnown RBP39.96■■■■□ 3.99
GRIN2C-205ENST00000584496 SHROOM4Q9ULL8 1493 aa39.56■■■■□ 3.92
GRIN2C-205ENST00000584496 DCAF1Q9Y4B6 1507 aa38.98■■■■□ 3.83
GRIN2C-205ENST00000584496 DCAF8L2P0C7V8 631 aa38.71■■■■□ 3.79
GRIN2C-205ENST00000584496 SUPT5HO00267 1087 aaKnown RBP38.59■■■■□ 3.77
GRIN2C-205ENST00000584496 MYO15BQ96JP2 1530 aa38.03■■■■□ 3.68
GRIN2C-205ENST00000584496 ABCC9O60706 1549 aa37.68■■■■□ 3.62
GRIN2C-205ENST00000584496 SCRIBQ14160 1630 aa37.64■■■■□ 3.62
GRIN2C-205ENST00000584496 CHIC1Q5VXU3 224 aa37.56■■■■□ 3.6
GRIN2C-205ENST00000584496 NACADO15069 1562 aa37.49■■■■□ 3.59
GRIN2C-205ENST00000584496 RSF1Q96T23 1441 aaPredicted RBP37.18■■■■□ 3.54
GRIN2C-205ENST00000584496 RB1CC1Q8TDY2 1594 aa36.9■■■■□ 3.5
GRIN2C-205ENST00000584496 CECR2Q9BXF3 1484 aa36.75■■■■□ 3.47
GRIN2C-205ENST00000584496 MROH2BQ7Z745 1585 aa36.65■■■■□ 3.46
GRIN2C-205ENST00000584496 WIZO95785 1651 aa36.43■■■■□ 3.42
GRIN2C-205ENST00000584496 UNC13AQ9UPW8 1703 aa36.4■■■■□ 3.42
GRIN2C-205ENST00000584496 BAZ1AQ9NRL2 1556 aaPredicted RBP36.34■■■■□ 3.41
GRIN2C-205ENST00000584496 LOC105371045A0A1W2PR82 267 aa36.26■■■■□ 3.39
GRIN2C-205ENST00000584496 TRIM41Q8WV44 630 aa36.1■■■■□ 3.37
GRIN2C-205ENST00000584496 SMARCA4P51532 1647 aa36.1■■■■□ 3.37
GRIN2C-205ENST00000584496 EIF4G1Q04637 1599 aaKnown RBP35.98■■■■□ 3.35
GRIN2C-205ENST00000584496 TOP2AP11388 1531 aaKnown RBP35.97■■■■□ 3.35
GRIN2C-205ENST00000584496 BICRAQ9NZM4 1560 aa35.94■■■■□ 3.34
GRIN2C-205ENST00000584496 PCGF6Q9BYE7 350 aa35.79■■■■□ 3.32
GRIN2C-205ENST00000584496 SMARCA2P51531 1590 aa35.73■■■■□ 3.31
GRIN2C-205ENST00000584496 HRCP23327 699 aa35.71■■■■□ 3.31
GRIN2C-205ENST00000584496 CCDC88BA6NC98 1476 aa35.69■■■■□ 3.3
GRIN2C-205ENST00000584496 PABPN1Q86U42 306 aaKnown RBP eCLIP35.62■■■■□ 3.29
GRIN2C-205ENST00000584496 FAM9AQ8IZU1 332 aaPredicted RBP35.6■■■■□ 3.29
GRIN2C-205ENST00000584496 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
GRIN2C-205ENST00000584496 ABCC8Q09428 1581 aa35.39■■■■□ 3.26
GRIN2C-205ENST00000584496 TRIM26Q12899 539 aaPredicted RBP35.39■■■■□ 3.26
GRIN2C-205ENST00000584496 ATAD2BQ9ULI0 1458 aa35.21■■■■□ 3.23
GRIN2C-205ENST00000584496 EHMT2Q96KQ7 1210 aa35.14■■■■□ 3.22
GRIN2C-205ENST00000584496 BAZ1BQ9UIG0 1483 aaKnown RBP35.04■■■■□ 3.2
GRIN2C-205ENST00000584496 SOGA1O94964 1423 aa34.96■■■■□ 3.19
GRIN2C-205ENST00000584496 EEA1Q15075 1411 aa34.92■■■■□ 3.18
GRIN2C-205ENST00000584496 WRNQ14191 1432 aaPredicted RBP eCLIP34.89■■■■□ 3.18
GRIN2C-205ENST00000584496 PPARGC1BQ86YN6 1023 aaKnown RBP34.84■■■■□ 3.17
GRIN2C-205ENST00000584496 RUSC2Q8N2Y8 1516 aa34.82■■■■□ 3.16
GRIN2C-205ENST00000584496 SYNJ1O43426 1573 aa34.81■■■■□ 3.16
GRIN2C-205ENST00000584496 CSRNP3Q8WYN3 585 aa34.71■■■■□ 3.15
GRIN2C-205ENST00000584496 TNIKQ9UKE5 1360 aa34.71■■■■□ 3.15
GRIN2C-205ENST00000584496 HMGXB3Q12766 1538 aa34.68■■■■□ 3.14
GRIN2C-205ENST00000584496 CEP162Q5TB80 1403 aa34.66■■■■□ 3.14
GRIN2C-205ENST00000584496 NCAPD3P42695 1498 aa34.65■■■■□ 3.14
GRIN2C-205ENST00000584496 GOLGA3Q08378 1498 aa34.58■■■■□ 3.13
GRIN2C-205ENST00000584496 KIF21BO75037 1637 aa34.51■■■■□ 3.11
GRIN2C-205ENST00000584496 ZEB1P37275 1124 aaPredicted RBP34.49■■■■□ 3.11
GRIN2C-205ENST00000584496 TOP2BQ02880 1626 aa34.48■■■■□ 3.11
GRIN2C-205ENST00000584496 CEP164Q9UPV0 1460 aa34.44■■■■□ 3.1
GRIN2C-205ENST00000584496 BIVM-ERCC5R4GMW8 1640 aa34.43■■■■□ 3.1
GRIN2C-205ENST00000584496 UBTFP17480 764 aaKnown RBP34.38■■■■□ 3.09
GRIN2C-205ENST00000584496 CFTRP13569 1480 aa34.24■■■■□ 3.07
GRIN2C-205ENST00000584496 CUX1P39880 1505 aa34.18■■■■□ 3.06
GRIN2C-205ENST00000584496 RAPGEF2Q9Y4G8 1499 aa34.17■■■■□ 3.06
GRIN2C-205ENST00000584496 PRDM2Q13029 1718 aa34.12■■■■□ 3.05
GRIN2C-205ENST00000584496 CLIP1P30622 1438 aa34.09■■■■□ 3.05
GRIN2C-205ENST00000584496 CC2D2AQ9P2K1 1620 aa34.07■■■■□ 3.04
GRIN2C-205ENST00000584496 ERICH3Q5RHP9 1530 aa34.03■■■■□ 3.04
GRIN2C-205ENST00000584496 PRXQ9BXM0 1461 aa34.01■■■■□ 3.03
GRIN2C-205ENST00000584496 VPS8Q8N3P4 1428 aa33.96■■■■□ 3.03
GRIN2C-205ENST00000584496 TTBK1Q5TCY1 1321 aaPredicted RBP33.95■■■■□ 3.03
GRIN2C-205ENST00000584496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.9■■■■□ 3.02
GRIN2C-205ENST00000584496 KIF27Q86VH2 1401 aa33.86■■■■□ 3.01
GRIN2C-205ENST00000584496 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
GRIN2C-205ENST00000584496 CCER1Q8TC90 406 aaPredicted RBP33.8■■■■□ 3
GRIN2C-205ENST00000584496 ARAP1Q96P48 1450 aa33.68■■■□□ 2.98
GRIN2C-205ENST00000584496 RANGAP1P46060 587 aaPredicted RBP33.59■■■□□ 2.97
GRIN2C-205ENST00000584496 CUX2O14529 1486 aa33.58■■■□□ 2.97
GRIN2C-205ENST00000584496 FGD5Q6ZNL6 1462 aa33.58■■■□□ 2.97
GRIN2C-205ENST00000584496 APLP2Q06481 763 aa33.53■■■□□ 2.96
GRIN2C-205ENST00000584496 IGF1RP08069 1367 aa33.52■■■□□ 2.96
GRIN2C-205ENST00000584496 FANCD2Q9BXW9 1451 aa33.52■■■□□ 2.96
GRIN2C-205ENST00000584496 ARHGAP35Q9NRY4 1499 aa33.44■■■□□ 2.94
GRIN2C-205ENST00000584496 DNMBPQ6XZF7 1577 aa33.41■■■□□ 2.94
GRIN2C-205ENST00000584496 HNRNPUL2Q1KMD3 747 aaKnown RBP33.35■■■□□ 2.93
GRIN2C-205ENST00000584496 CARMIL1Q5VZK9 1371 aa33.34■■■□□ 2.93
GRIN2C-205ENST00000584496 NESP48681 1621 aa33.33■■■□□ 2.93
GRIN2C-205ENST00000584496 TOPBP1Q92547 1522 aa33.31■■■□□ 2.92
GRIN2C-205ENST00000584496 ABCA10Q8WWZ4 1543 aa33.26■■■□□ 2.92
GRIN2C-205ENST00000584496 KANK4Q5T7N3 995 aaPredicted RBP33.26■■■□□ 2.91
GRIN2C-205ENST00000584496 POLA1P09884 1462 aaPredicted RBP33.25■■■□□ 2.91
GRIN2C-205ENST00000584496 LAMC3Q9Y6N6 1575 aa33.24■■■□□ 2.91
GRIN2C-205ENST00000584496 RAD54L2Q9Y4B4 1467 aa33.21■■■□□ 2.91
GRIN2C-205ENST00000584496 DNAJC5BQ9UF47 199 aa33.18■■■□□ 2.9
GRIN2C-205ENST00000584496 RRBP1Q9P2E9 1410 aaKnown RBP33.16■■■□□ 2.9
GRIN2C-205ENST00000584496 WDR97A6NE52 1622 aa33.11■■■□□ 2.89
GRIN2C-205ENST00000584496 MAP3K1Q13233 1512 aa33.1■■■□□ 2.89
GRIN2C-205ENST00000584496 URB2Q14146 1524 aaKnown RBP33.1■■■□□ 2.89
GRIN2C-205ENST00000584496 CUL7Q14999 1698 aa33.08■■■□□ 2.89
GRIN2C-205ENST00000584496 TIAM1Q13009 1591 aa33.05■■■□□ 2.88
GRIN2C-205ENST00000584496 DIEXFQ68CQ4 756 aaKnown RBP32.96■■■□□ 2.87
GRIN2C-205ENST00000584496 ABCA5Q8WWZ7 1642 aa32.94■■■□□ 2.86
GRIN2C-205ENST00000584496 CTTNBP2Q8WZ74 1663 aa32.94■■■□□ 2.86
GRIN2C-205ENST00000584496 CCNB3Q8WWL7 1395 aa32.93■■■□□ 2.86
GRIN2C-205ENST00000584496 PDS5BQ9NTI5 1447 aa32.93■■■□□ 2.86
GRIN2C-205ENST00000584496 FHAD1B1AJZ9 1412 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms