RNA–Protein interactions for RNA: ENST00000497653.5

PCBP4-217, Transcript of poly(rC) binding protein 4, humanhuman

TSL 4

Gene PCBP4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-217ENST00000497653 NISCHQ9Y2I1 1504 aa40.05■■■■■ 4
PCBP4-217ENST00000497653 ABCC9O60706 1549 aa36.49■■■■□ 3.43
PCBP4-217ENST00000497653 CCDC180Q9P1Z9 1646 aa35.94■■■■□ 3.34
PCBP4-217ENST00000497653 DNAJC5BQ9UF47 199 aa34.6■■■■□ 3.13
PCBP4-217ENST00000497653 RB1CC1Q8TDY2 1594 aa34.48■■■■□ 3.11
PCBP4-217ENST00000497653 DCAF8L2P0C7V8 631 aa34.23■■■■□ 3.07
PCBP4-217ENST00000497653 NACADO15069 1562 aa34.15■■■■□ 3.06
PCBP4-217ENST00000497653 PABPN1Q86U42 306 aaKnown RBP eCLIP34.03■■■■□ 3.04
PCBP4-217ENST00000497653 UNC13AQ9UPW8 1703 aa33.59■■■□□ 2.97
PCBP4-217ENST00000497653 MYO15BQ96JP2 1530 aa33.52■■■□□ 2.96
PCBP4-217ENST00000497653 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
PCBP4-217ENST00000497653 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
PCBP4-217ENST00000497653 DCAF1Q9Y4B6 1507 aa32.98■■■□□ 2.87
PCBP4-217ENST00000497653 SHROOM4Q9ULL8 1493 aa32.92■■■□□ 2.86
PCBP4-217ENST00000497653 CECR2Q9BXF3 1484 aa32.88■■■□□ 2.85
PCBP4-217ENST00000497653 SCRIBQ14160 1630 aa32.86■■■□□ 2.85
PCBP4-217ENST00000497653 CC2D2AQ9P2K1 1620 aa32.86■■■□□ 2.85
PCBP4-217ENST00000497653 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.82
PCBP4-217ENST00000497653 DNAJC5Q9H3Z4 198 aa32■■■□□ 2.71
PCBP4-217ENST00000497653 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
PCBP4-217ENST00000497653 ERCC6Q03468 1493 aa31.52■■■□□ 2.64
PCBP4-217ENST00000497653 CUX2O14529 1486 aa31.5■■■□□ 2.63
PCBP4-217ENST00000497653 ATAD2BQ9ULI0 1458 aa31.45■■■□□ 2.62
PCBP4-217ENST00000497653 SMARCA2P51531 1590 aa31.29■■■□□ 2.6
PCBP4-217ENST00000497653 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
PCBP4-217ENST00000497653 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
PCBP4-217ENST00000497653 NESP48681 1621 aa31.23■■■□□ 2.59
PCBP4-217ENST00000497653 BAZ1BQ9UIG0 1483 aaKnown RBP31.13■■■□□ 2.57
PCBP4-217ENST00000497653 BAZ1AQ9NRL2 1556 aaPredicted RBP31.09■■■□□ 2.57
PCBP4-217ENST00000497653 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
PCBP4-217ENST00000497653 MROH2BQ7Z745 1585 aa30.88■■■□□ 2.53
PCBP4-217ENST00000497653 LAMC3Q9Y6N6 1575 aa30.87■■■□□ 2.53
PCBP4-217ENST00000497653 THOC2Q8NI27 1593 aaKnown RBP30.85■■■□□ 2.53
PCBP4-217ENST00000497653 PDS5BQ9NTI5 1447 aa30.8■■■□□ 2.52
PCBP4-217ENST00000497653 KIF21AQ7Z4S6 1674 aa30.7■■■□□ 2.5
PCBP4-217ENST00000497653 CADPSQ9ULU8 1353 aa30.66■■■□□ 2.5
PCBP4-217ENST00000497653 TRIM41Q8WV44 630 aa30.54■■■□□ 2.48
PCBP4-217ENST00000497653 MRC2Q9UBG0 1479 aa30.5■■■□□ 2.47
PCBP4-217ENST00000497653 WIZO95785 1651 aa30.46■■■□□ 2.47
PCBP4-217ENST00000497653 WDR62O43379 1518 aa30.39■■■□□ 2.46
PCBP4-217ENST00000497653 CEP164Q9UPV0 1460 aa30.32■■■□□ 2.44
PCBP4-217ENST00000497653 FANCD2Q9BXW9 1451 aa30.28■■■□□ 2.44
PCBP4-217ENST00000497653 CFTRP13569 1480 aa30.19■■■□□ 2.42
PCBP4-217ENST00000497653 OSCARQ8IYS5 282 aa30.16■■■□□ 2.42
PCBP4-217ENST00000497653 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
PCBP4-217ENST00000497653 URB2Q14146 1524 aaKnown RBP30.03■■■□□ 2.4
PCBP4-217ENST00000497653 TOP2AP11388 1531 aaKnown RBP30.02■■■□□ 2.4
PCBP4-217ENST00000497653 CCDC88BA6NC98 1476 aa29.78■■■□□ 2.36
PCBP4-217ENST00000497653 ZNF608Q9ULD9 1512 aaPredicted RBP29.75■■■□□ 2.35
PCBP4-217ENST00000497653 IFT140Q96RY7 1462 aa29.73■■■□□ 2.35
PCBP4-217ENST00000497653 PRDM2Q13029 1718 aa29.67■■■□□ 2.34
PCBP4-217ENST00000497653 TOPBP1Q92547 1522 aa29.65■■■□□ 2.34
PCBP4-217ENST00000497653 RIMBP3CA6NJZ7 1639 aa29.64■■■□□ 2.34
PCBP4-217ENST00000497653 RIMBP3BA6NNM3 1639 aa29.64■■■□□ 2.34
PCBP4-217ENST00000497653 RIMBP3Q9UFD9 1639 aa29.64■■■□□ 2.34
PCBP4-217ENST00000497653 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
PCBP4-217ENST00000497653 ARHGEF11O15085 1522 aa29.55■■■□□ 2.32
PCBP4-217ENST00000497653 CYB5RLQ6IPT4 315 aa29.52■■■□□ 2.32
PCBP4-217ENST00000497653 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.31
PCBP4-217ENST00000497653 EIF4G3O43432 1585 aaKnown RBP29.47■■■□□ 2.31
PCBP4-217ENST00000497653 FBLN2P98095 1184 aa29.47■■■□□ 2.31
PCBP4-217ENST00000497653 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
PCBP4-217ENST00000497653 TARBP1Q13395 1621 aaKnown RBP29.36■■■□□ 2.29
PCBP4-217ENST00000497653 TRHP20396 242 aaPredicted RBP29.33■■■□□ 2.29
PCBP4-217ENST00000497653 POLA1P09884 1462 aaPredicted RBP29.32■■■□□ 2.28
PCBP4-217ENST00000497653 CHD1O14646 1710 aa29.3■■■□□ 2.28
PCBP4-217ENST00000497653 RAD54L2Q9Y4B4 1467 aa29.29■■■□□ 2.28
PCBP4-217ENST00000497653 TDRD9Q8NDG6 1382 aaKnown RBP29.27■■■□□ 2.28
PCBP4-217ENST00000497653 SOGA1O94964 1423 aa29.27■■■□□ 2.28
PCBP4-217ENST00000497653 ARAP1Q96P48 1450 aa29.23■■■□□ 2.27
PCBP4-217ENST00000497653 CHMP7Q8WUX9 453 aaPredicted RBP29.16■■■□□ 2.26
PCBP4-217ENST00000497653 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
PCBP4-217ENST00000497653 FGD5Q6ZNL6 1462 aa29.1■■■□□ 2.25
PCBP4-217ENST00000497653 CUX1P39880 1505 aa29.01■■■□□ 2.23
PCBP4-217ENST00000497653 GRIN2BQ13224 1484 aa28.99■■■□□ 2.23
PCBP4-217ENST00000497653 MAGI1Q96QZ7 1491 aaPredicted RBP28.98■■■□□ 2.23
PCBP4-217ENST00000497653 CLASP1Q7Z460 1538 aa28.98■■■□□ 2.23
PCBP4-217ENST00000497653 WDR97A6NE52 1622 aa28.98■■■□□ 2.23
PCBP4-217ENST00000497653 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
PCBP4-217ENST00000497653 SYNJ2O15056 1496 aa28.91■■■□□ 2.22
PCBP4-217ENST00000497653 GAPVD1Q14C86 1478 aa28.86■■■□□ 2.21
PCBP4-217ENST00000497653 PBRM1Q86U86 1689 aa28.74■■■□□ 2.19
PCBP4-217ENST00000497653 SUPT5HO00267 1087 aaKnown RBP28.73■■■□□ 2.19
PCBP4-217ENST00000497653 ABCA10Q8WWZ4 1543 aa28.73■■■□□ 2.19
PCBP4-217ENST00000497653 AEBP2Q6ZN18 517 aaPredicted RBP28.71■■■□□ 2.19
PCBP4-217ENST00000497653 ABCA5Q8WWZ7 1642 aa28.65■■■□□ 2.18
PCBP4-217ENST00000497653 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
PCBP4-217ENST00000497653 GRIN2AQ12879 1464 aa28.6■■■□□ 2.17
PCBP4-217ENST00000497653 ERCC6L2Q5T890 1561 aa28.57■■■□□ 2.16
PCBP4-217ENST00000497653 NUP160Q12769 1436 aa28.51■■■□□ 2.15
PCBP4-217ENST00000497653 CEP170Q5SW79 1584 aa28.49■■■□□ 2.15
PCBP4-217ENST00000497653 ADAMTS12P58397 1594 aa28.48■■■□□ 2.15
PCBP4-217ENST00000497653 FHAD1B1AJZ9 1412 aa28.47■■■□□ 2.15
PCBP4-217ENST00000497653 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
PCBP4-217ENST00000497653 BIVM-ERCC5R4GMW8 1640 aa28.37■■■□□ 2.13
PCBP4-217ENST00000497653 JPH4Q96JJ6 628 aa28.35■■■□□ 2.13
PCBP4-217ENST00000497653 ERICH3Q5RHP9 1530 aa28.34■■■□□ 2.13
PCBP4-217ENST00000497653 SHROOM2Q13796 1616 aa28.34■■■□□ 2.13
PCBP4-217ENST00000497653 PRG4Q92954 1404 aaPredicted RBP28.34■■■□□ 2.13
PCBP4-217ENST00000497653 NPM1P06748 294 aaKnown RBP eCLIP28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms