RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 NISCHQ9Y2I1 1504 aa24.74■■□□□ 1.55
GSE1-203ENST00000405402 DCAF8L2P0C7V8 631 aa24.19■■□□□ 1.46
GSE1-203ENST00000405402 SUPT5HO00267 1087 aaKnown RBP23.63■■□□□ 1.37
GSE1-203ENST00000405402 SHROOM4Q9ULL8 1493 aa23.54■■□□□ 1.36
GSE1-203ENST00000405402 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
GSE1-203ENST00000405402 PCGF6Q9BYE7 350 aa22.26■■□□□ 1.15
GSE1-203ENST00000405402 FAM9AQ8IZU1 332 aaPredicted RBP22.2■■□□□ 1.14
GSE1-203ENST00000405402 TTBK1Q5TCY1 1321 aaPredicted RBP21.87■■□□□ 1.09
GSE1-203ENST00000405402 LOC105371045A0A1W2PR82 267 aa21.67■■□□□ 1.06
GSE1-203ENST00000405402 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
GSE1-203ENST00000405402 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
GSE1-203ENST00000405402 PPARGC1BQ86YN6 1023 aaKnown RBP21.58■■□□□ 1.05
GSE1-203ENST00000405402 RANGAP1P46060 587 aaPredicted RBP21.44■■□□□ 1.02
GSE1-203ENST00000405402 HRCP23327 699 aa21.36■■□□□ 1.01
GSE1-203ENST00000405402 CCER1Q8TC90 406 aaPredicted RBP21.23■□□□□ 0.99
GSE1-203ENST00000405402 APLP2Q06481 763 aa21.19■□□□□ 0.98
GSE1-203ENST00000405402 TRIM26Q12899 539 aaPredicted RBP21.16■□□□□ 0.98
GSE1-203ENST00000405402 UBTFP17480 764 aaKnown RBP21.14■□□□□ 0.97
GSE1-203ENST00000405402 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
GSE1-203ENST00000405402 ABCC9O60706 1549 aa20.96■□□□□ 0.95
GSE1-203ENST00000405402 YTHDC1Q96MU7 727 aaKnown RBP20.85■□□□□ 0.93
GSE1-203ENST00000405402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.81■□□□□ 0.92
GSE1-203ENST00000405402 ATP1B4Q9UN42 357 aaPredicted RBP20.78■□□□□ 0.92
GSE1-203ENST00000405402 CENPBP07199 599 aaPredicted RBP20.7■□□□□ 0.9
GSE1-203ENST00000405402 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
GSE1-203ENST00000405402 PABPN1Q86U42 306 aaKnown RBP eCLIP20.62■□□□□ 0.89
GSE1-203ENST00000405402 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
GSE1-203ENST00000405402 ITGAEP38570 1179 aa20.57■□□□□ 0.88
GSE1-203ENST00000405402 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
GSE1-203ENST00000405402 PELP1Q8IZL8 1130 aaKnown RBP20.39■□□□□ 0.86
GSE1-203ENST00000405402 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
GSE1-203ENST00000405402 SCRIBQ14160 1630 aa20.26■□□□□ 0.83
GSE1-203ENST00000405402 DCAF1Q9Y4B6 1507 aa20.09■□□□□ 0.81
GSE1-203ENST00000405402 CSRNP3Q8WYN3 585 aa20.09■□□□□ 0.81
GSE1-203ENST00000405402 GTF3C3Q9Y5Q9 886 aa20.08■□□□□ 0.8
GSE1-203ENST00000405402 CNGB1Q14028 1251 aaPredicted RBP20.02■□□□□ 0.8
GSE1-203ENST00000405402 CCDC180Q9P1Z9 1646 aa20.01■□□□□ 0.79
GSE1-203ENST00000405402 RSF1Q96T23 1441 aaPredicted RBP19.99■□□□□ 0.79
GSE1-203ENST00000405402 FAM50AQ14320 339 aaKnown RBP19.94■□□□□ 0.78
GSE1-203ENST00000405402 NEUROD1Q13562 356 aa19.92■□□□□ 0.78
GSE1-203ENST00000405402 NEFLP07196 543 aa19.91■□□□□ 0.78
GSE1-203ENST00000405402 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.78
GSE1-203ENST00000405402 P3H3Q8IVL6 736 aa19.88■□□□□ 0.77
GSE1-203ENST00000405402 POLR3GLQ9BT43 218 aa19.87■□□□□ 0.77
GSE1-203ENST00000405402 ACIN1Q9UKV3 1341 aaKnown RBP19.85■□□□□ 0.77
GSE1-203ENST00000405402 BCANQ96GW7 911 aa19.76■□□□□ 0.75
GSE1-203ENST00000405402 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
GSE1-203ENST00000405402 ERICH6Q7L0X2 663 aa19.75■□□□□ 0.75
GSE1-203ENST00000405402 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
GSE1-203ENST00000405402 ARID3CA6NKF2 412 aa19.68■□□□□ 0.74
GSE1-203ENST00000405402 TRIM52Q96A61 297 aa19.6■□□□□ 0.73
GSE1-203ENST00000405402 MIER1Q8N108 512 aa19.57■□□□□ 0.72
GSE1-203ENST00000405402 CEP162Q5TB80 1403 aa19.51■□□□□ 0.71
GSE1-203ENST00000405402 RB1CC1Q8TDY2 1594 aa19.51■□□□□ 0.71
GSE1-203ENST00000405402 HIRIP3Q9BW71 556 aaPredicted RBP19.47■□□□□ 0.71
GSE1-203ENST00000405402 ZNF326Q5BKZ1 582 aaKnown RBP19.45■□□□□ 0.7
GSE1-203ENST00000405402 CLIP1P30622 1438 aa19.43■□□□□ 0.7
GSE1-203ENST00000405402 DDX10Q13206 875 aaKnown RBP19.43■□□□□ 0.7
GSE1-203ENST00000405402 SOGA1O94964 1423 aa19.43■□□□□ 0.7
GSE1-203ENST00000405402 MROH2BQ7Z745 1585 aa19.41■□□□□ 0.7
GSE1-203ENST00000405402 ANP32CO43423 234 aa19.39■□□□□ 0.69
GSE1-203ENST00000405402 MYT1LQ9UL68 1186 aa19.39■□□□□ 0.69
GSE1-203ENST00000405402 FBLN2P98095 1184 aa19.38■□□□□ 0.69
GSE1-203ENST00000405402 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.683e-6■■■■□ 26.6
GSE1-203ENST00000405402 MYT1Q01538 1121 aa19.3■□□□□ 0.68
GSE1-203ENST00000405402 ABCC8Q09428 1581 aa19.29■□□□□ 0.68
GSE1-203ENST00000405402 CHIC2Q9UKJ5 165 aa19.28■□□□□ 0.68
GSE1-203ENST00000405402 TNIKQ9UKE5 1360 aa19.28■□□□□ 0.68
GSE1-203ENST00000405402 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.68
GSE1-203ENST00000405402 NACADO15069 1562 aa19.27■□□□□ 0.67
GSE1-203ENST00000405402 GOLGA3Q08378 1498 aa19.24■□□□□ 0.67
GSE1-203ENST00000405402 FKBP8Q14318 412 aa19.24■□□□□ 0.67
GSE1-203ENST00000405402 ZNF777Q9ULD5 760 aaPredicted RBP19.22■□□□□ 0.67
GSE1-203ENST00000405402 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
GSE1-203ENST00000405402 WIZO95785 1651 aa19.15■□□□□ 0.66
GSE1-203ENST00000405402 EEA1Q15075 1411 aa19.13■□□□□ 0.65
GSE1-203ENST00000405402 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
GSE1-203ENST00000405402 TONSLQ96HA7 1378 aa19.12■□□□□ 0.65
GSE1-203ENST00000405402 HNRNPUQ00839 825 aaKnown RBP eCLIP19.11■□□□□ 0.65
GSE1-203ENST00000405402 KANK4Q5T7N3 995 aaPredicted RBP19.1■□□□□ 0.65
GSE1-203ENST00000405402 SLC4A1APQ9BWU0 796 aaKnown RBP19.09■□□□□ 0.65
GSE1-203ENST00000405402 BAZ1BQ9UIG0 1483 aaKnown RBP19.08■□□□□ 0.65
GSE1-203ENST00000405402 SENP3-EIF4A1A0A087X0R7 540 aa19.08■□□□□ 0.64
GSE1-203ENST00000405402 IRX6P78412 446 aaPredicted RBP19.08■□□□□ 0.64
GSE1-203ENST00000405402 FAM9BQ8IZU0 186 aa19.07■□□□□ 0.64
GSE1-203ENST00000405402 RRP7BPQ9NSQ0 103 aa19.06■□□□□ 0.64
GSE1-203ENST00000405402 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
GSE1-203ENST00000405402 RUSC2Q8N2Y8 1516 aa19.06■□□□□ 0.64
GSE1-203ENST00000405402 CDK11AQ9UQ88 783 aaPredicted RBP19.01■□□□□ 0.63
GSE1-203ENST00000405402 SALL2Q9Y467 1007 aaPredicted RBP18.99■□□□□ 0.63
GSE1-203ENST00000405402 MTUS2Q5JR59 1369 aa18.99■□□□□ 0.63
GSE1-203ENST00000405402 KIF27Q86VH2 1401 aa18.93■□□□□ 0.62
GSE1-203ENST00000405402 DAXXQ9UER7 740 aaPredicted RBP18.93■□□□□ 0.62
GSE1-203ENST00000405402 KDM2AQ9Y2K7 1162 aa18.88■□□□□ 0.61
GSE1-203ENST00000405402 VPS8Q8N3P4 1428 aa18.87■□□□□ 0.61
GSE1-203ENST00000405402 CLSPNQ9HAW4 1339 aa18.85■□□□□ 0.61
GSE1-203ENST00000405402 MRS2Q9HD23 443 aa18.84■□□□□ 0.61
GSE1-203ENST00000405402 CCNB3Q8WWL7 1395 aa18.84■□□□□ 0.61
GSE1-203ENST00000405402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.62e-9■■□□□ 11.9
GSE1-203ENST00000405402 RAPGEF2Q9Y4G8 1499 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms