RNA–Protein interactions for RNA: ENST00000471358.1

PCBP4-209, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-209ENST00000471358 NISCHQ9Y2I1 1504 aa42.68■■■■■ 4.42
PCBP4-209ENST00000471358 ABCC9O60706 1549 aa38.17■■■■□ 3.7
PCBP4-209ENST00000471358 CCDC180Q9P1Z9 1646 aa38.12■■■■□ 3.69
PCBP4-209ENST00000471358 RB1CC1Q8TDY2 1594 aa36.28■■■■□ 3.4
PCBP4-209ENST00000471358 DCAF8L2P0C7V8 631 aa36.12■■■■□ 3.37
PCBP4-209ENST00000471358 NACADO15069 1562 aa36.07■■■■□ 3.37
PCBP4-209ENST00000471358 DNAJC5BQ9UF47 199 aa35.8■■■■□ 3.32
PCBP4-209ENST00000471358 PABPN1Q86U42 306 aaKnown RBP eCLIP35.64■■■■□ 3.3
PCBP4-209ENST00000471358 MYO15BQ96JP2 1530 aa35.6■■■■□ 3.29
PCBP4-209ENST00000471358 UNC13AQ9UPW8 1703 aa35.45■■■■□ 3.27
PCBP4-209ENST00000471358 ZCCHC6Q5VYS8 1495 aaKnown RBP35.37■■■■□ 3.25
PCBP4-209ENST00000471358 BICRAQ9NZM4 1560 aa35.28■■■■□ 3.24
PCBP4-209ENST00000471358 DCAF1Q9Y4B6 1507 aa35.2■■■■□ 3.23
PCBP4-209ENST00000471358 SCRIBQ14160 1630 aa34.84■■■■□ 3.17
PCBP4-209ENST00000471358 SHROOM4Q9ULL8 1493 aa34.7■■■■□ 3.15
PCBP4-209ENST00000471358 CC2D2AQ9P2K1 1620 aa34.42■■■■□ 3.1
PCBP4-209ENST00000471358 EIF4G1Q04637 1599 aaKnown RBP34.37■■■■□ 3.09
PCBP4-209ENST00000471358 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
PCBP4-209ENST00000471358 NCAPD3P42695 1498 aa33.36■■■□□ 2.93
PCBP4-209ENST00000471358 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
PCBP4-209ENST00000471358 SMARCA4P51532 1647 aa33.23■■■□□ 2.91
PCBP4-209ENST00000471358 SMARCA2P51531 1590 aa33.13■■■□□ 2.89
PCBP4-209ENST00000471358 BAZ1AQ9NRL2 1556 aaPredicted RBP33.08■■■□□ 2.89
PCBP4-209ENST00000471358 HMGXB3Q12766 1538 aa33.05■■■□□ 2.88
PCBP4-209ENST00000471358 BAZ1BQ9UIG0 1483 aaKnown RBP32.94■■■□□ 2.86
PCBP4-209ENST00000471358 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
PCBP4-209ENST00000471358 ERCC6Q03468 1493 aa32.89■■■□□ 2.86
PCBP4-209ENST00000471358 PEG3Q9GZU2 1588 aa32.88■■■□□ 2.85
PCBP4-209ENST00000471358 NESP48681 1621 aa32.84■■■□□ 2.85
PCBP4-209ENST00000471358 CUX2O14529 1486 aa32.75■■■□□ 2.83
PCBP4-209ENST00000471358 DNAJC5Q9H3Z4 198 aa32.7■■■□□ 2.83
PCBP4-209ENST00000471358 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
PCBP4-209ENST00000471358 WIZO95785 1651 aa32.5■■■□□ 2.79
PCBP4-209ENST00000471358 PDS5BQ9NTI5 1447 aa32.38■■■□□ 2.77
PCBP4-209ENST00000471358 THOC2Q8NI27 1593 aaKnown RBP32.37■■■□□ 2.77
PCBP4-209ENST00000471358 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
PCBP4-209ENST00000471358 KIF21AQ7Z4S6 1674 aa32.31■■■□□ 2.76
PCBP4-209ENST00000471358 RSF1Q96T23 1441 aaPredicted RBP32.31■■■□□ 2.76
PCBP4-209ENST00000471358 MRC2Q9UBG0 1479 aa32.08■■■□□ 2.73
PCBP4-209ENST00000471358 TOP2AP11388 1531 aaKnown RBP32.07■■■□□ 2.72
PCBP4-209ENST00000471358 CFTRP13569 1480 aa32.01■■■□□ 2.71
PCBP4-209ENST00000471358 FANCD2Q9BXW9 1451 aa31.98■■■□□ 2.71
PCBP4-209ENST00000471358 CEP164Q9UPV0 1460 aa31.97■■■□□ 2.71
PCBP4-209ENST00000471358 WDR62O43379 1518 aa31.97■■■□□ 2.71
PCBP4-209ENST00000471358 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
PCBP4-209ENST00000471358 URB2Q14146 1524 aaKnown RBP31.73■■■□□ 2.67
PCBP4-209ENST00000471358 PRDM2Q13029 1718 aa31.55■■■□□ 2.64
PCBP4-209ENST00000471358 TOPBP1Q92547 1522 aa31.39■■■□□ 2.61
PCBP4-209ENST00000471358 OSCARQ8IYS5 282 aa31.38■■■□□ 2.61
PCBP4-209ENST00000471358 TRIM41Q8WV44 630 aa31.36■■■□□ 2.61
PCBP4-209ENST00000471358 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
PCBP4-209ENST00000471358 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
PCBP4-209ENST00000471358 ABCC8Q09428 1581 aa31.29■■■□□ 2.6
PCBP4-209ENST00000471358 DNMBPQ6XZF7 1577 aa31.24■■■□□ 2.59
PCBP4-209ENST00000471358 AQRO60306 1485 aaKnown RBP eCLIP31.09■■■□□ 2.57
PCBP4-209ENST00000471358 TARBP1Q13395 1621 aaKnown RBP31.08■■■□□ 2.57
PCBP4-209ENST00000471358 EIF4G3O43432 1585 aaKnown RBP31.08■■■□□ 2.57
PCBP4-209ENST00000471358 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
PCBP4-209ENST00000471358 SUPT5HO00267 1087 aaKnown RBP31.06■■■□□ 2.56
PCBP4-209ENST00000471358 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.56
PCBP4-209ENST00000471358 SOGA1O94964 1423 aa30.98■■■□□ 2.55
PCBP4-209ENST00000471358 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
PCBP4-209ENST00000471358 CUX1P39880 1505 aa30.92■■■□□ 2.54
PCBP4-209ENST00000471358 FGD5Q6ZNL6 1462 aa30.91■■■□□ 2.54
PCBP4-209ENST00000471358 FBLN2P98095 1184 aa30.89■■■□□ 2.54
PCBP4-209ENST00000471358 RIMBP3CA6NJZ7 1639 aa30.87■■■□□ 2.53
PCBP4-209ENST00000471358 RIMBP3BA6NNM3 1639 aa30.87■■■□□ 2.53
PCBP4-209ENST00000471358 RIMBP3Q9UFD9 1639 aa30.87■■■□□ 2.53
PCBP4-209ENST00000471358 CHD1O14646 1710 aa30.81■■■□□ 2.52
PCBP4-209ENST00000471358 ARHGEF11O15085 1522 aa30.81■■■□□ 2.52
PCBP4-209ENST00000471358 SNAPC4Q5SXM2 1469 aa30.72■■■□□ 2.51
PCBP4-209ENST00000471358 CYB5RLQ6IPT4 315 aa30.68■■■□□ 2.5
PCBP4-209ENST00000471358 WDR97A6NE52 1622 aa30.68■■■□□ 2.5
PCBP4-209ENST00000471358 CHMP7Q8WUX9 453 aaPredicted RBP30.65■■■□□ 2.5
PCBP4-209ENST00000471358 GRIN2BQ13224 1484 aa30.64■■■□□ 2.5
PCBP4-209ENST00000471358 MAGI1Q96QZ7 1491 aaPredicted RBP30.61■■■□□ 2.49
PCBP4-209ENST00000471358 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
PCBP4-209ENST00000471358 ABCA10Q8WWZ4 1543 aa30.54■■■□□ 2.48
PCBP4-209ENST00000471358 ARAP1Q96P48 1450 aa30.54■■■□□ 2.48
PCBP4-209ENST00000471358 SYNJ2O15056 1496 aa30.52■■■□□ 2.48
PCBP4-209ENST00000471358 CLASP1Q7Z460 1538 aa30.49■■■□□ 2.47
PCBP4-209ENST00000471358 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
PCBP4-209ENST00000471358 PBRM1Q86U86 1689 aa30.46■■■□□ 2.47
PCBP4-209ENST00000471358 SYNJ1O43426 1573 aa30.45■■■□□ 2.47
PCBP4-209ENST00000471358 ABCA5Q8WWZ7 1642 aa30.45■■■□□ 2.47
PCBP4-209ENST00000471358 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
PCBP4-209ENST00000471358 BIVM-ERCC5R4GMW8 1640 aa30.37■■■□□ 2.45
PCBP4-209ENST00000471358 TRHP20396 242 aaPredicted RBP30.28■■■□□ 2.44
PCBP4-209ENST00000471358 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
PCBP4-209ENST00000471358 ADAMTS12P58397 1594 aa30.22■■■□□ 2.43
PCBP4-209ENST00000471358 FHAD1B1AJZ9 1412 aa30.19■■■□□ 2.42
PCBP4-209ENST00000471358 NUP160Q12769 1436 aa30.15■■■□□ 2.42
PCBP4-209ENST00000471358 CEP170Q5SW79 1584 aa30.14■■■□□ 2.42
PCBP4-209ENST00000471358 ERICH3Q5RHP9 1530 aa30.13■■■□□ 2.41
PCBP4-209ENST00000471358 ERCC6L2Q5T890 1561 aa30.1■■■□□ 2.41
PCBP4-209ENST00000471358 SHROOM2Q13796 1616 aa29.96■■■□□ 2.39
PCBP4-209ENST00000471358 JPH4Q96JJ6 628 aa29.92■■■□□ 2.38
PCBP4-209ENST00000471358 IGF1RP08069 1367 aa29.9■■■□□ 2.38
PCBP4-209ENST00000471358 PRG4Q92954 1404 aaPredicted RBP29.88■■■□□ 2.37
PCBP4-209ENST00000471358 KIF27Q86VH2 1401 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms